RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 CCDC172P0C7W6 258 aa14.95□□□□□ -0.02
HDDC2-202ENST00000398153 CHRNB1P11230 501 aa14.95□□□□□ -0.02
HDDC2-202ENST00000398153 DRD1P21728 446 aa14.95□□□□□ -0.02
HDDC2-202ENST00000398153 CDH5P33151 784 aaPredicted RBP14.95□□□□□ -0.02
HDDC2-202ENST00000398153 SOX5P35711 763 aa14.95□□□□□ -0.02
HDDC2-202ENST00000398153 JAM2P57087 298 aa14.95□□□□□ -0.02
HDDC2-202ENST00000398153 POLR2FP61218 127 aaKnown RBP14.95□□□□□ -0.02
HDDC2-202ENST00000398153 GRSF1Q12849 480 aaKnown RBP eCLIP14.95□□□□□ -0.02
HDDC2-202ENST00000398153 PDCLQ13371 301 aa14.95□□□□□ -0.02
HDDC2-202ENST00000398153 FBXO43Q4G163 708 aa14.95□□□□□ -0.02
HDDC2-202ENST00000398153 PREPLQ4J6C6 727 aaPredicted RBP14.95□□□□□ -0.02
HDDC2-202ENST00000398153 TMEM196Q5HYL7 178 aa14.95□□□□□ -0.02
HDDC2-202ENST00000398153 MSANTD2Q6P1R3 559 aa14.95□□□□□ -0.02
HDDC2-202ENST00000398153 ZDHHC17Q8IUH5 632 aa14.95□□□□□ -0.02
HDDC2-202ENST00000398153 SCUBE3Q8IX30 993 aa14.95□□□□□ -0.02
HDDC2-202ENST00000398153 TMEM35BQ8NCS4 154 aa14.95□□□□□ -0.02
HDDC2-202ENST00000398153 TTC16Q8NEE8 873 aa14.95□□□□□ -0.02
HDDC2-202ENST00000398153 PLD4Q96BZ4 506 aa14.95□□□□□ -0.02
HDDC2-202ENST00000398153 MIS12Q9H081 205 aa14.95□□□□□ -0.02
HDDC2-202ENST00000398153 MYO6Q9UM54 1294 aa14.95□□□□□ -0.02
HDDC2-202ENST00000398153 HBS1LQ9Y450 684 aaKnown RBP14.95□□□□□ -0.02
HDDC2-202ENST00000398153 MTF2Q9Y483 593 aaPredicted RBP14.95□□□□□ -0.02
HDDC2-202ENST00000398153 A0A1B0GTH6 734 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 A0A1W2PQC6 194 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 GOLGA6L19H0YKK7 550 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 GREM1O60565 184 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 STC2O76061 302 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 LSM8O95777 96 aaKnown RBP14.94□□□□□ -0.02
HDDC2-202ENST00000398153 DCNP07585 359 aaKnown RBP14.94□□□□□ -0.02
HDDC2-202ENST00000398153 CHKAP35790 457 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 STAT1P42224 750 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 SOX9P48436 509 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 GAD2Q05329 585 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 EFEMP1Q12805 493 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 NNTQ13423 1086 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 CCINQ13939 588 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 DHCR24Q15392 516 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 TXNDC11Q6PKC3 985 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 MIB1Q86YT6 1006 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 C1orf210Q8IVY1 113 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 WDTC1Q8N5D0 677 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 PPP1R13BQ96KQ4 1090 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 P2RY13Q9BPV8 354 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 PDCL3Q9H2J4 239 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 CHRDQ9H2X0 955 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 LMAN1LQ9HAT1 526 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 CBX8Q9HC52 389 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 TMEM51Q9NW97 253 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 ASNSD1Q9NWL6 643 aa14.94□□□□□ -0.02
HDDC2-202ENST00000398153 NDRG2Q9UN36 371 aaKnown RBP14.94□□□□□ -0.02
HDDC2-202ENST00000398153 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.93□□□□□ -0.02
HDDC2-202ENST00000398153 E5RJQ4 531 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 LATS1O95835 1130 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 SERPINC1P01008 464 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 CYP17A1P05093 508 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 ZNF445P59923 1031 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 YWHAZP63104 245 aaKnown RBP14.93□□□□□ -0.02
HDDC2-202ENST00000398153 RING1Q06587 406 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 PPP2R5DQ14738 602 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 PON2Q15165 354 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 TRIP4Q15650 581 aaPredicted RBP14.93□□□□□ -0.02
HDDC2-202ENST00000398153 EFHC1Q5JVL4 640 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 RHBDF2Q6PJF5 856 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 Q6ZNB5 142 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 BBS7Q8IWZ6 715 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 MSANTD4Q8NCY6 345 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 C1orf131Q8NDD1 294 aaKnown RBP14.93□□□□□ -0.02
HDDC2-202ENST00000398153 TTC8Q8TAM2 541 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 EPS8L1Q8TE68 723 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 DDX1Q92499 740 aaKnown RBP14.93□□□□□ -0.02
HDDC2-202ENST00000398153 CD101Q93033 1021 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 IRX2Q9BZI1 471 aaPredicted RBP14.93□□□□□ -0.02
HDDC2-202ENST00000398153 POPDC2Q9HBU9 364 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 NLRC4Q9NPP4 1024 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 SPHK2Q9NRA0 654 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 WDR35Q9P2L0 1181 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 CYTH4Q9UIA0 394 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 RASAL2Q9UJF2 1139 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 NUDT5Q9UKK9 219 aa14.93□□□□□ -0.02
HDDC2-202ENST00000398153 A0A0A0MRY4 1105 aa14.92□□□□□ -0.02
HDDC2-202ENST00000398153 SLC12A8A0AV02 714 aa14.92□□□□□ -0.02
HDDC2-202ENST00000398153 HOXC11O43248 304 aaPredicted RBP14.92□□□□□ -0.02
HDDC2-202ENST00000398153 PAPSS1O43252 624 aaPredicted RBP14.92□□□□□ -0.02
HDDC2-202ENST00000398153 PNMA6AP0CW24 399 aaPredicted RBP14.92□□□□□ -0.02
HDDC2-202ENST00000398153 IRF1P10914 325 aa14.92□□□□□ -0.02
HDDC2-202ENST00000398153 ADH5P11766 374 aa14.92□□□□□ -0.02
HDDC2-202ENST00000398153 NCAM1P13591 858 aa14.92□□□□□ -0.02
HDDC2-202ENST00000398153 SCNN1AP37088 669 aa14.92□□□□□ -0.02
HDDC2-202ENST00000398153 HARS2P49590 506 aaKnown RBP14.92□□□□□ -0.02
HDDC2-202ENST00000398153 KLK7P49862 253 aa14.92□□□□□ -0.02
HDDC2-202ENST00000398153 GALK1P51570 392 aa14.92□□□□□ -0.02
HDDC2-202ENST00000398153 NR1I3Q14994 352 aa14.92□□□□□ -0.02
HDDC2-202ENST00000398153 NFKBIBQ15653 356 aa14.92□□□□□ -0.02
HDDC2-202ENST00000398153 TRIM72Q6ZMU5 477 aa14.92□□□□□ -0.02
HDDC2-202ENST00000398153 TOGARAM2Q6ZUX3 1019 aa14.92□□□□□ -0.02
HDDC2-202ENST00000398153 NUDT18Q6ZVK8 323 aa14.92□□□□□ -0.02
HDDC2-202ENST00000398153 CACNA2D4Q7Z3S7 1137 aa14.92□□□□□ -0.02
HDDC2-202ENST00000398153 LUZP1Q86V48 1076 aa14.92□□□□□ -0.02
HDDC2-202ENST00000398153 UNC45BQ8IWX7 931 aa14.92□□□□□ -0.02
HDDC2-202ENST00000398153 PRSS33Q8NF86 280 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms