RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 EML3Q32P44 896 aa22.17■■□□□ 1.14
TSPAN4-206ENST00000397408 CWF19L1Q69YN2 538 aaKnown RBP22.17■■□□□ 1.14
TSPAN4-206ENST00000397408 PIWIL1Q96J94 861 aaKnown RBP22.17■■□□□ 1.14
TSPAN4-206ENST00000397408 LRFN3Q9BTN0 628 aa22.17■■□□□ 1.14
TSPAN4-206ENST00000397408 EDEM3Q9BZQ6 932 aa22.17■■□□□ 1.14
TSPAN4-206ENST00000397408 LINC00597Q9H2U6 94 aa22.17■■□□□ 1.14
TSPAN4-206ENST00000397408 SLC12A8A0AV02 714 aa22.16■■□□□ 1.14
TSPAN4-206ENST00000397408 SLC9A3R1O14745 358 aaPredicted RBP22.16■■□□□ 1.14
TSPAN4-206ENST00000397408 STARD6P59095 220 aa22.16■■□□□ 1.14
TSPAN4-206ENST00000397408 ASIC2Q16515 512 aa22.16■■□□□ 1.14
TSPAN4-206ENST00000397408 FAM183BPQ6ZVS7 135 aa22.16■■□□□ 1.14
TSPAN4-206ENST00000397408 CPA6Q8N4T0 437 aa22.16■■□□□ 1.14
TSPAN4-206ENST00000397408 FBXL6Q8N531 539 aa22.16■■□□□ 1.14
TSPAN4-206ENST00000397408 LSM7Q9UK45 103 aaKnown RBP22.16■■□□□ 1.14
TSPAN4-206ENST00000397408 OTOL1A6NHN0 477 aaPredicted RBP22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 CYP1A1P04798 512 aaPredicted RBP22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 HMBSP08397 361 aa22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 NCAM1P13591 858 aa22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 CD72P21854 359 aa22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 COG7P83436 770 aa22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 SFMBT2Q5VUG0 894 aa22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 E4F1Q66K89 784 aaPredicted RBP22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 OR6B2Q6IFH4 312 aa22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 MSANTD2Q6P1R3 559 aa22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 OLFML1Q6UWY5 402 aa22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 TRIM72Q6ZMU5 477 aa22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 ERICH1Q86X53 443 aa22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 SUGP1Q8IWZ8 645 aaKnown RBP22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 MSANTD4Q8NCY6 345 aa22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 CPA5Q8WXQ8 436 aa22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 TRIM62Q9BVG3 475 aa22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 FOXQ1Q9C009 403 aa22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 C8orf33Q9H7E9 229 aaPredicted RBP22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 ECT2Q9H8V3 914 aa22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 SEPT11Q9NVA2 429 aaKnown RBP22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 TBC1D14Q9P2M4 693 aa22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 SFMBT1Q9UHJ3 866 aa22.15■■□□□ 1.14
TSPAN4-206ENST00000397408 A0A1W2PQJ5 194 aa22.14■■□□□ 1.14
TSPAN4-206ENST00000397408 SPECC1L-ADORA2AF8WAN1 911 aa22.14■■□□□ 1.14
TSPAN4-206ENST00000397408 GREM1O60565 184 aa22.14■■□□□ 1.14
TSPAN4-206ENST00000397408 STC2O76061 302 aa22.14■■□□□ 1.14
TSPAN4-206ENST00000397408 NFATC1O95644 943 aa22.14■■□□□ 1.14
TSPAN4-206ENST00000397408 FYNP06241 537 aa22.14■■□□□ 1.14
TSPAN4-206ENST00000397408 GLULP15104 373 aa22.14■■□□□ 1.14
TSPAN4-206ENST00000397408 CTHP32929 405 aa22.14■■□□□ 1.14
TSPAN4-206ENST00000397408 ZNF852Q6ZMS4 543 aa22.14■■□□□ 1.14
TSPAN4-206ENST00000397408 TOGARAM2Q6ZUX3 1019 aa22.14■■□□□ 1.14
TSPAN4-206ENST00000397408 IRF2BP2Q7Z5L9 587 aa22.14■■□□□ 1.14
TSPAN4-206ENST00000397408 BBS7Q8IWZ6 715 aa22.14■■□□□ 1.14
TSPAN4-206ENST00000397408 MSANTD3Q96H12 275 aa22.14■■□□□ 1.14
TSPAN4-206ENST00000397408 AGPAT1Q99943 283 aa22.14■■□□□ 1.14
TSPAN4-206ENST00000397408 DDX23Q9BUQ8 820 aaKnown RBP22.14■■□□□ 1.14
TSPAN4-206ENST00000397408 RBSNQ9H1K0 784 aa22.14■■□□□ 1.14
TSPAN4-206ENST00000397408 NAALADL1Q9UQQ1 740 aa22.14■■□□□ 1.14
TSPAN4-206ENST00000397408 ITIH6Q6UXX5 1313 aa22.14■■□□□ 1.14
TSPAN4-206ENST00000397408 KANSL1LA0AUZ9 987 aa22.14■■□□□ 1.13
TSPAN4-206ENST00000397408 SHISA7A6NL88 538 aa22.14■■□□□ 1.13
TSPAN4-206ENST00000397408 MAN2B1O00754 1011 aa22.14■■□□□ 1.13
TSPAN4-206ENST00000397408 CAPN9O14815 690 aa22.14■■□□□ 1.13
TSPAN4-206ENST00000397408 MSI1O43347 362 aaKnown RBP22.14■■□□□ 1.13
TSPAN4-206ENST00000397408 MLLT6P55198 1093 aaPredicted RBP22.14■■□□□ 1.13
TSPAN4-206ENST00000397408 YWHAZP63104 245 aaKnown RBP22.14■■□□□ 1.13
TSPAN4-206ENST00000397408 UBXN2BQ14CS0 331 aa22.14■■□□□ 1.13
TSPAN4-206ENST00000397408 TAF5Q15542 800 aa22.14■■□□□ 1.13
TSPAN4-206ENST00000397408 C2CD6Q53TS8 623 aa22.14■■□□□ 1.13
TSPAN4-206ENST00000397408 HTR3DQ70Z44 454 aa22.14■■□□□ 1.13
TSPAN4-206ENST00000397408 BEND5Q7L4P6 421 aa22.14■■□□□ 1.13
TSPAN4-206ENST00000397408 GAS2L3Q86XJ1 694 aa22.14■■□□□ 1.13
TSPAN4-206ENST00000397408 C18orf8Q96DM3 657 aa22.14■■□□□ 1.13
TSPAN4-206ENST00000397408 IQCDQ96DY2 449 aa22.14■■□□□ 1.13
TSPAN4-206ENST00000397408 PCDHB18PQ96TA0 734 aa22.14■■□□□ 1.13
TSPAN4-206ENST00000397408 POPDC2Q9HBU9 364 aa22.14■■□□□ 1.13
TSPAN4-206ENST00000397408 AIPL1Q9NZN9 384 aa22.14■■□□□ 1.13
TSPAN4-206ENST00000397408 HSF2BPO75031 334 aa22.13■■□□□ 1.13
TSPAN4-206ENST00000397408 GRAP2O75791 330 aa22.13■■□□□ 1.13
TSPAN4-206ENST00000397408 GYPCP04921 128 aa22.13■■□□□ 1.13
TSPAN4-206ENST00000397408 CYP17A1P05093 508 aa22.13■■□□□ 1.13
TSPAN4-206ENST00000397408 GLI1P08151 1106 aa22.13■■□□□ 1.13
TSPAN4-206ENST00000397408 EFHC1Q5JVL4 640 aa22.13■■□□□ 1.13
TSPAN4-206ENST00000397408 ASTLQ6HA08 431 aaPredicted RBP22.13■■□□□ 1.13
TSPAN4-206ENST00000397408 TXNDC11Q6PKC3 985 aa22.13■■□□□ 1.13
TSPAN4-206ENST00000397408 RALGPS2Q86X27 583 aaPredicted RBP22.13■■□□□ 1.13
TSPAN4-206ENST00000397408 ZDHHC17Q8IUH5 632 aa22.13■■□□□ 1.13
TSPAN4-206ENST00000397408 SLC30A5Q8TAD4 765 aa22.13■■□□□ 1.13
TSPAN4-206ENST00000397408 DQX1Q8TE96 717 aaKnown RBP22.13■■□□□ 1.13
TSPAN4-206ENST00000397408 CPLX3Q8WVH0 158 aa22.13■■□□□ 1.13
TSPAN4-206ENST00000397408 FAM3CQ92520 227 aa22.13■■□□□ 1.13
TSPAN4-206ENST00000397408 PLD4Q96BZ4 506 aa22.13■■□□□ 1.13
TSPAN4-206ENST00000397408 OTUB2Q96DC9 234 aa22.13■■□□□ 1.13
TSPAN4-206ENST00000397408 LTB4R2Q9NPC1 389 aa22.13■■□□□ 1.13
TSPAN4-206ENST00000397408 ASNSD1Q9NWL6 643 aa22.13■■□□□ 1.13
TSPAN4-206ENST00000397408 HBS1LQ9Y450 684 aaKnown RBP22.13■■□□□ 1.13
TSPAN4-206ENST00000397408 UNGP13051 313 aaPredicted RBP22.12■■□□□ 1.13
TSPAN4-206ENST00000397408 AOC1P19801 751 aa22.12■■□□□ 1.13
TSPAN4-206ENST00000397408 CORO1AP31146 461 aaKnown RBP22.12■■□□□ 1.13
TSPAN4-206ENST00000397408 GABRB2P47870 512 aa22.12■■□□□ 1.13
TSPAN4-206ENST00000397408 VCPP55072 806 aaKnown RBP22.12■■□□□ 1.13
TSPAN4-206ENST00000397408 SLC6A3Q01959 620 aa22.12■■□□□ 1.13
TSPAN4-206ENST00000397408 CLEC16AQ2KHT3 1053 aa22.12■■□□□ 1.13
TSPAN4-206ENST00000397408 SYPL2Q5VXT5 272 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms