RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 RSPO2Q6UXX9 243 aaPredicted RBP9□□□□□ -0.97
TDP1-203ENST00000393454 SYDE1Q6ZW31 735 aaPredicted RBP9□□□□□ -0.97
TDP1-203ENST00000393454 STKLD1Q8NE28 680 aa9□□□□□ -0.97
TDP1-203ENST00000393454 ACTL9Q8TC94 416 aa9□□□□□ -0.97
TDP1-203ENST00000393454 RIN2Q8WYP3 895 aaPredicted RBP9□□□□□ -0.97
TDP1-203ENST00000393454 SEC14L1Q92503 715 aa9□□□□□ -0.97
TDP1-203ENST00000393454 FUBP3Q96I24 572 aaKnown RBP eCLIP9□□□□□ -0.97
TDP1-203ENST00000393454 IGSF21Q96ID5 467 aa9□□□□□ -0.97
TDP1-203ENST00000393454 RNF157Q96PX1 679 aa9□□□□□ -0.97
TDP1-203ENST00000393454 MAGEB5Q9BZ81 275 aa9□□□□□ -0.97
TDP1-203ENST00000393454 NEUROG2Q9H2A3 272 aa9□□□□□ -0.97
TDP1-203ENST00000393454 SLC27A5Q9Y2P5 690 aa9□□□□□ -0.97
TDP1-203ENST00000393454 USP3Q9Y6I4 520 aa9□□□□□ -0.97
TDP1-203ENST00000393454 SGK1O00141 431 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 MAP2K7O14733 419 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 ENDOD1O94919 500 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 KRT14P02533 472 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 CAPN2P17655 700 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 L1CAMP32004 1257 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 ADCY8P40145 1251 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 VCPP55072 806 aaKnown RBP8.99□□□□□ -0.97
TDP1-203ENST00000393454 YWHAGP61981 247 aaKnown RBP eCLIP8.99□□□□□ -0.97
TDP1-203ENST00000393454 NNTQ13423 1086 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 MGAT5BQ3V5L5 792 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 OTUD1Q5VV17 481 aaPredicted RBP8.99□□□□□ -0.97
TDP1-203ENST00000393454 RNF19BQ6ZMZ0 732 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 NUP93Q8N1F7 819 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 EIF1ADQ8N9N8 165 aaKnown RBP8.99□□□□□ -0.97
TDP1-203ENST00000393454 GPR152Q8TDT2 470 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.99□□□□□ -0.978e-7■■■■■ 32.1
TDP1-203ENST00000393454 SLCO2A1Q92959 643 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 CAVIN3Q969G5 261 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 RNF34Q969K3 372 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 NT5C3BQ969T7 300 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 C8orf48Q96LL4 319 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 ZNF558Q96NG5 402 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 KCTD15Q96SI1 283 aaPredicted RBP8.99□□□□□ -0.97
TDP1-203ENST00000393454 YME1L1Q96TA2 773 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 SEPT5Q99719 369 aaPredicted RBP8.99□□□□□ -0.97
TDP1-203ENST00000393454 ACBD3Q9H3P7 528 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 IL23AQ9NPF7 189 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 PIGVQ9NUD9 493 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 DDIT4Q9NX09 232 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 RRN3Q9NYV6 651 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.99□□□□□ -0.97
TDP1-203ENST00000393454 FZD10Q9ULW2 581 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 CDY1Q9Y6F8 540 aa8.99□□□□□ -0.97
TDP1-203ENST00000393454 APOC4-APOC2K7ER74 178 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 TNFRSF10BO14763 440 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 APOL1O14791 398 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 MCF2LO15068 1137 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 SOAT2O75908 522 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 APOC2P02655 101 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 ATF2P15336 505 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 PECAM1P16284 738 aaPredicted RBP8.98□□□□□ -0.97
TDP1-203ENST00000393454 RPL17P18621 184 aaKnown RBP8.98□□□□□ -0.97
TDP1-203ENST00000393454 IL4RP24394 825 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 ECHS1P30084 290 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 GBP1P32455 592 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 ARL4AP40617 200 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 MAGEA11P43364 429 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 DRG2P55039 364 aaKnown RBP8.98□□□□□ -0.97
TDP1-203ENST00000393454 EIF3EP60228 445 aaKnown RBP8.98□□□□□ -0.97
TDP1-203ENST00000393454 FAM193AP78312 1265 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 CALCOCO2Q13137 446 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 GPR17Q13304 367 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 PTK6Q13882 451 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 PSMD5Q16401 504 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 DPYSL2Q16555 572 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 EFHC2Q5JST6 749 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 DRICH1Q6PGQ1 229 aaPredicted RBP8.98□□□□□ -0.97
TDP1-203ENST00000393454 NPNTQ6UXI9 565 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 BHLHA9Q7RTU4 235 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 PRUNE1Q86TP1 453 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 SCML4Q8N228 414 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 PYROXD2Q8N2H3 581 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 TTC9BQ8N6N2 239 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 FBXO22Q8NEZ5 403 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 P3H4Q92791 437 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 ZNF689Q96CS4 500 aaPredicted RBP8.98□□□□□ -0.97
TDP1-203ENST00000393454 TMEM169Q96HH4 297 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 FMO2Q99518 471 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 ZNF670Q9BS34 389 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 TMEM121Q9BTD3 319 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 TRIM62Q9BVG3 475 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 FRMD8P1Q9BZ68 369 aaPredicted RBP8.98□□□□□ -0.97
TDP1-203ENST00000393454 MCOLN1Q9GZU1 580 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 C10orf88Q9H8K7 445 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 TMPRSS4Q9NRS4 437 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 DRG1Q9Y295 367 aaKnown RBP8.98□□□□□ -0.97
TDP1-203ENST00000393454 HEY1Q9Y5J3 304 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 LTBP2Q14767 1821 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 PATJQ8NI35 1801 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 MYO16Q9Y6X6 1858 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 A0A1W2PQH9 124 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 MTMR11A4FU01 709 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 H7C0C1 242 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 CREB3O43889 395 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 F9P00740 461 aa8.98□□□□□ -0.97
TDP1-203ENST00000393454 IFNB1P01574 187 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms