RNA–Protein interactions for RNA: ENST00000381800.3

LOH12CR2-201, Transcript of loss of heterozygosity, 12, chromosomal region 2, humanhuman

TSL 1 (best) BASIC

Gene LOH12CR2, Length 1,540 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOH12CR2-201ENST00000381800 KRT82Q9NSB4 513 aa16.82■□□□□ 0.28
LOH12CR2-201ENST00000381800 SLC24A2Q9UI40 661 aa16.82■□□□□ 0.28
LOH12CR2-201ENST00000381800 FZD10Q9ULW2 581 aa16.82■□□□□ 0.28
LOH12CR2-201ENST00000381800 NOD1Q9Y239 953 aa16.82■□□□□ 0.28
LOH12CR2-201ENST00000381800 USP3Q9Y6I4 520 aa16.82■□□□□ 0.28
LOH12CR2-201ENST00000381800 GMNCA6NCL1 334 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 H7C0C1 242 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 COL6A1P12109 1028 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 ACAT1P24752 427 aaKnown RBP16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 ATP5OP48047 213 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 SULT1E1P49888 294 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 PRMT2P55345 433 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 DAOAP59103 153 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 IFI35P80217 286 aaPredicted RBP16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 SCAPQ12770 1279 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 KCNJ11Q14654 390 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 LONRF1Q17RB8 773 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 DEFB115Q30KQ5 88 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 OTUD1Q5VV17 481 aaPredicted RBP16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 DCLRE1AQ6PJP8 1040 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 CD300LGQ6UXG3 332 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 EXOC3L1Q86VI1 746 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 NLRP14Q86W24 1093 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 C9orf72Q96LT7 481 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 GLT1D1Q96MS3 346 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 PWWP2AQ96N64 755 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 CSPG4P5Q96PW8 444 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 KCTD15Q96SI1 283 aaPredicted RBP16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 PKMYT1Q99640 499 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 SMOQ99835 787 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 TRIM62Q9BVG3 475 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 ADAM33Q9BZ11 813 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 TMEM51Q9NW97 253 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 GPATCH2LQ9NWQ4 482 aa16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 TDRD15B5MCY1 1934 aaKnown RBP16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 ATXN2Q99700 1313 aaKnown RBP16.81■□□□□ 0.28
LOH12CR2-201ENST00000381800 C5orf60A6NFR6 353 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 HHLA1C9JL84 531 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 TMEM189-UBE2V1I3L0A0 370 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 CLDN5O00501 218 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 GCATO75600 419 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 SPAG6O75602 509 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 AP1G2O75843 785 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 BEST1O76090 585 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 TFE3P19532 575 aaPredicted RBP16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 PHBP35232 272 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 ARL4AP40617 200 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 AFF1P51825 1210 aaKnown RBP16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 TKTL1P51854 596 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 FAM189BP81408 668 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 RNASELQ05823 741 aaKnown RBP16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 SLC45A4Q5BKX6 768 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 INTS6LQ5JSJ4 861 aaKnown RBP16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 TRAF7Q6Q0C0 670 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 NPNTQ6UXI9 565 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 B4GALNT4Q76KP1 1039 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 TADA2BQ86TJ2 420 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 PDIK1LQ8N165 341 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 ATP11CQ8NB49 1132 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 ZMIZ2Q8NF64 920 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 UHMK1Q8TAS1 419 aaKnown RBP16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 ARHGEF2Q92974 986 aaKnown RBP16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 PCED1BQ96HM7 432 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 SUSD3Q96L08 255 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 XPO6Q96QU8 1125 aaKnown RBP16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 RTP3Q9BQQ7 232 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 DHX35Q9H5Z1 703 aaKnown RBP16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 SENP1Q9P0U3 644 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 RAD54BQ9Y620 910 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 FRMPD3Q5JV73 1810 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 MYBPHLA2RUH7 354 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 H3BRJ5 948 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 NDUFAB1O14561 156 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 AOC2O75106 756 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 ZBED1O96006 694 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 SLC18A1P54219 525 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 PDIA2Q13087 525 aaKnown RBP16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 ARHGEF6Q15052 776 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 PM20D1Q6GTS8 502 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 MCUQ8NE86 351 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 MAML1Q92585 1016 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 FAM149B1Q96BN6 582 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 QKIQ96PU8 341 aaKnown RBP eCLIP16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 OSBPL7Q9BZF2 842 aa16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 TRMT13Q9NUP7 481 aaKnown RBP16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 DNAJC17Q9NVM6 304 aaKnown RBP16.8■□□□□ 0.28
LOH12CR2-201ENST00000381800 CASTOR2A6NHX0 329 aa16.79■□□□□ 0.28
LOH12CR2-201ENST00000381800 EBAG9O00559 213 aa16.79■□□□□ 0.28
LOH12CR2-201ENST00000381800 F9P00740 461 aa16.79■□□□□ 0.28
LOH12CR2-201ENST00000381800 CKBP12277 381 aa16.79■□□□□ 0.28
LOH12CR2-201ENST00000381800 SLCO1A2P46721 670 aa16.79■□□□□ 0.28
LOH12CR2-201ENST00000381800 HCAR3P49019 387 aa16.79■□□□□ 0.28
LOH12CR2-201ENST00000381800 MAP3K7CLP57077 242 aa16.79■□□□□ 0.28
LOH12CR2-201ENST00000381800 DCAF6Q58WW2 860 aa16.79■□□□□ 0.28
LOH12CR2-201ENST00000381800 EFHC2Q5JST6 749 aa16.79■□□□□ 0.28
LOH12CR2-201ENST00000381800 ANKRD22Q5VYY1 191 aa16.79■□□□□ 0.28
LOH12CR2-201ENST00000381800 TTC19Q6DKK2 380 aaPredicted RBP16.79■□□□□ 0.28
LOH12CR2-201ENST00000381800 C1orf228Q6PIY5 440 aa16.79■□□□□ 0.28
LOH12CR2-201ENST00000381800 CCDC185Q8N715 623 aa16.79■□□□□ 0.28
LOH12CR2-201ENST00000381800 SLAIN1Q8ND83 568 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms