RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 FAM102AQ5T9C2 384 aaPredicted RBP16.89■□□□□ 0.29
NKX3-1-201ENST00000380871 C7orf31Q8N865 590 aa16.89■□□□□ 0.29
NKX3-1-201ENST00000380871 KIF12Q96FN5 646 aa16.89■□□□□ 0.29
NKX3-1-201ENST00000380871 SYT17Q9BSW7 474 aa16.89■□□□□ 0.29
NKX3-1-201ENST00000380871 MROH8Q9H579 483 aa16.89■□□□□ 0.29
NKX3-1-201ENST00000380871 TUT1Q9H6E5 874 aaKnown RBP16.89■□□□□ 0.29
NKX3-1-201ENST00000380871 MGAMO43451 1857 aa16.89■□□□□ 0.29
NKX3-1-201ENST00000380871 C1QAP02745 245 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 YWHAEP62258 255 aaKnown RBP16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 MRPS5P82675 430 aaKnown RBP16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 KLC1Q07866 573 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 SURF1Q15526 300 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 SLC10A6Q3KNW5 377 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 RNF220Q5VTB9 566 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 LRRC74BQ6ZQY2 392 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 ARID3BQ8IVW6 561 aaPredicted RBP16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 PDCD7Q8N8D1 485 aaKnown RBP16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 ANKRD27Q96NW4 1050 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 MTO1Q9Y2Z2 717 aaKnown RBP16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 TTLL3Q9Y4R7 772 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 LCTP09848 1927 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 CCL15-CCL14A0A0B4J2E2 113 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 ASB14A6NK59 587 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 H7C0C1 242 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 COPEO14579 308 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 TRUB2O95900 331 aaKnown RBP16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 RARBP10826 455 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 ATP5OP48047 213 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 YWHAZP63104 245 aaKnown RBP16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 MXRA7P84157 204 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 SLC18A2Q05940 514 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 KDSRQ06136 332 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 BST1Q10588 318 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 CCL15Q16663 113 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 ZCCHC23Q6ZST2 131 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 CHSY1Q86X52 802 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 FAM161BQ96MY7 647 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 PTPRHQ9HD43 1115 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 HEY1Q9Y5J3 304 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 MICAL2O94851 1124 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 IRX4P78413 519 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 PTPN11Q06124 597 aaPredicted RBP16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 CYP4V2Q6ZWL3 525 aaPredicted RBP16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 CMASQ8NFW8 434 aaPredicted RBP16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 KCNH4Q9UQ05 1017 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 TNFSF13BQ9Y275 285 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 EFR3BQ9Y2G0 817 aa16.88■□□□□ 0.29
NKX3-1-201ENST00000380871 B2RBV5 119 aa16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 KCNN4O15554 427 aa16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 HCRTO43612 131 aa16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 DNAJC6O75061 913 aa16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 PGM1P36871 562 aa16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 TMEM132DQ14C87 1099 aa16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 IQCGQ9H095 443 aaKnown RBP16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 PDZD7Q9H5P4 517 aa16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 PRMT7Q9NVM4 692 aaPredicted RBP16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 KLK14Q9P0G3 267 aa16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 PPARGC1AQ9UBK2 798 aaKnown RBP16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 SNX9Q9Y5X1 595 aa16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 F5H423 210 aaPredicted RBP16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 PPEF2O14830 753 aa16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 DYNC1LI2O43237 492 aaPredicted RBP16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 NDST1P52848 882 aa16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 SLC25A41Q8N5S1 370 aa16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 SLC4A11Q8NBS3 891 aa16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 RBM15BQ8NDT2 890 aaKnown RBP16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 ADPGKQ9BRR6 497 aa16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 MIS12Q9H081 205 aa16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 PPP1R12AO14974 1030 aaPredicted RBP16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 B4GALT4O60513 344 aa16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 APRTP07741 180 aa16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 SP100P23497 879 aaPredicted RBP16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 TMPRSS15P98073 1019 aa16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 SLC34A1Q06495 639 aa16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 CHI3L2Q15782 390 aa16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 TRMT10BQ6PF06 316 aaKnown RBP16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 NR2E3Q9Y5X4 410 aa16.87■□□□□ 0.29
NKX3-1-201ENST00000380871 BRCA1P38398 1863 aaKnown RBP16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 BTBD19C9JJ37 291 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 NPTXRO95502 500 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 CSH1P0DML2 217 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 CSH2P0DML3 217 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 MRPS35P82673 323 aaKnown RBP16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 LAMC2Q13753 1193 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 NOMO1Q15155 1222 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 TAPT1Q6NXT6 567 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 ACOT1Q86TX2 421 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 STMN2Q93045 179 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 PPP1R12CQ9BZL4 782 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 PHACTR1Q9C0D0 580 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 NGRNQ9NPE2 291 aaKnown RBP16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 KRT82Q9NSB4 513 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 SLC17A6Q9P2U8 582 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 DCAF8L1A6NGE4 600 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 MEI4A8MW99 385 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 HNRNPCL1O60812 293 aaKnown RBP16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 RNF8O76064 485 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 LMNAP02545 664 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms