RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 HSF2BPO75031 334 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 SERPING1P05155 500 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 GLULP15104 373 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 EFEMP1Q12805 493 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 ARID5BQ14865 1188 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 E4F1Q66K89 784 aaPredicted RBP13.85□□□□□ -0.19
CKAP2-202ENST00000378034 OLFML1Q6UWY5 402 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 FAM183BPQ6ZVS7 135 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 HTR3DQ70Z44 454 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 SLC26A9Q7LBE3 791 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 PHF13Q86YI8 300 aaPredicted RBP13.85□□□□□ -0.19
CKAP2-202ENST00000378034 RIN3Q8TB24 985 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 CSGALNACT1Q8TDX6 532 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 EDEM1Q92611 657 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 OTUB2Q96DC9 234 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 GKN1Q9NS71 199 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 SEPT11Q9NVA2 429 aaKnown RBP13.85□□□□□ -0.19
CKAP2-202ENST00000378034 DUS2Q9NX74 493 aaKnown RBP13.85□□□□□ -0.19
CKAP2-202ENST00000378034 WDR35Q9P2L0 1181 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 TJP2Q9UDY2 1190 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 RASAL2Q9UJF2 1139 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 LSM7Q9UK45 103 aaKnown RBP13.85□□□□□ -0.19
CKAP2-202ENST00000378034 NUDT5Q9UKK9 219 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 FBXL21Q9UKT6 434 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 SH3BP1Q9Y3L3 701 aa13.85□□□□□ -0.19
CKAP2-202ENST00000378034 HBS1LQ9Y450 684 aaKnown RBP13.85□□□□□ -0.19
CKAP2-202ENST00000378034 CAPN9O14815 690 aa13.84□□□□□ -0.19
CKAP2-202ENST00000378034 FYNP06241 537 aa13.84□□□□□ -0.19
CKAP2-202ENST00000378034 NCAM1P13591 858 aa13.84□□□□□ -0.19
CKAP2-202ENST00000378034 IFNAR2P48551 515 aa13.84□□□□□ -0.19
CKAP2-202ENST00000378034 ZNF75DP51815 510 aa13.84□□□□□ -0.19
CKAP2-202ENST00000378034 ZNF571Q7Z3V5 609 aaPredicted RBP13.84□□□□□ -0.19
CKAP2-202ENST00000378034 VPS36Q86VN1 386 aa13.84□□□□□ -0.19
CKAP2-202ENST00000378034 XYLT1Q86Y38 959 aa13.84□□□□□ -0.19
CKAP2-202ENST00000378034 MIB1Q86YT6 1006 aa13.84□□□□□ -0.19
CKAP2-202ENST00000378034 OR8K1Q8NGG5 319 aa13.84□□□□□ -0.19
CKAP2-202ENST00000378034 PLD4Q96BZ4 506 aa13.84□□□□□ -0.19
CKAP2-202ENST00000378034 MSANTD3Q96H12 275 aa13.84□□□□□ -0.19
CKAP2-202ENST00000378034 DCLK3Q9C098 648 aa13.84□□□□□ -0.19
CKAP2-202ENST00000378034 TMEM51Q9NW97 253 aa13.84□□□□□ -0.19
CKAP2-202ENST00000378034 ZNF510Q9Y2H8 683 aa13.84□□□□□ -0.19
CKAP2-202ENST00000378034 MDM4O15151 490 aa13.83□□□□□ -0.19
CKAP2-202ENST00000378034 CALB1P05937 261 aa13.83□□□□□ -0.19
CKAP2-202ENST00000378034 GZMAP12544 262 aa13.83□□□□□ -0.19
CKAP2-202ENST00000378034 GSCP56915 257 aaPredicted RBP13.83□□□□□ -0.19
CKAP2-202ENST00000378034 PRKCQQ04759 706 aa13.83□□□□□ -0.19
CKAP2-202ENST00000378034 C1QBPQ07021 282 aaKnown RBP13.83□□□□□ -0.19
CKAP2-202ENST00000378034 NNTQ13423 1086 aa13.83□□□□□ -0.19
CKAP2-202ENST00000378034 TSR1Q2NL82 804 aaKnown RBP13.83□□□□□ -0.19
CKAP2-202ENST00000378034 SLC44A4Q53GD3 710 aa13.83□□□□□ -0.19
CKAP2-202ENST00000378034 HGSNATQ68CP4 663 aa13.83□□□□□ -0.19
CKAP2-202ENST00000378034 ACAD10Q6JQN1 1059 aa13.83□□□□□ -0.19
CKAP2-202ENST00000378034 C1orf228Q6PIY5 440 aa13.83□□□□□ -0.19
CKAP2-202ENST00000378034 ARCQ7LC44 396 aa13.83□□□□□ -0.19
CKAP2-202ENST00000378034 ATP2A3Q93084 1043 aa13.83□□□□□ -0.19
CKAP2-202ENST00000378034 SHDQ96IW2 340 aa13.83□□□□□ -0.19
CKAP2-202ENST00000378034 VCPIP1Q96JH7 1222 aa13.83□□□□□ -0.19
CKAP2-202ENST00000378034 SLC2A13Q96QE2 648 aa13.83□□□□□ -0.19
CKAP2-202ENST00000378034 DNAJC7Q99615 494 aa13.83□□□□□ -0.19
CKAP2-202ENST00000378034 EPHX3Q9H6B9 360 aa13.83□□□□□ -0.19
CKAP2-202ENST00000378034 COL4A2P08572 1712 aa13.83□□□□□ -0.2
CKAP2-202ENST00000378034 SLC12A8A0AV02 714 aa13.83□□□□□ -0.2
CKAP2-202ENST00000378034 TBX2Q13207 712 aaPredicted RBP13.83□□□□□ -0.2
CKAP2-202ENST00000378034 ITPRIPL2Q3MIP1 535 aa13.83□□□□□ -0.2
CKAP2-202ENST00000378034 TDRD12Q587J7 1177 aaKnown RBP13.83□□□□□ -0.2
CKAP2-202ENST00000378034 MMS22LQ6ZRQ5 1243 aa13.83□□□□□ -0.2
CKAP2-202ENST00000378034 TMC6Q7Z403 805 aa13.83□□□□□ -0.2
CKAP2-202ENST00000378034 CNGA4Q8IV77 575 aa13.83□□□□□ -0.2
CKAP2-202ENST00000378034 SLC30A5Q8TAD4 765 aa13.83□□□□□ -0.2
CKAP2-202ENST00000378034 ASIC4Q96FT7 647 aa13.83□□□□□ -0.2
CKAP2-202ENST00000378034 ZFYVE19Q96K21 471 aa13.83□□□□□ -0.2
CKAP2-202ENST00000378034 SERPINB11Q96P15 392 aa13.83□□□□□ -0.2
CKAP2-202ENST00000378034 C8orf33Q9H7E9 229 aaPredicted RBP13.83□□□□□ -0.2
CKAP2-202ENST00000378034 ARHGEF3Q9NR81 526 aa13.83□□□□□ -0.2
CKAP2-202ENST00000378034 ZNHIT6Q9NWK9 470 aaKnown RBP13.83□□□□□ -0.2
CKAP2-202ENST00000378034 RRN3Q9NYV6 651 aa13.83□□□□□ -0.2
CKAP2-202ENST00000378034 ADAM22Q9P0K1 906 aa13.83□□□□□ -0.2
CKAP2-202ENST00000378034 NAALADL1Q9UQQ1 740 aa13.83□□□□□ -0.2
CKAP2-202ENST00000378034 TICRRQ7Z2Z1 1910 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 TMEM221A6NGB7 291 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 M0R296 226 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 GREM1O60565 184 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 DAB1O75553 588 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 STC2O76061 302 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 NFATC1O95644 943 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 SKILP12757 684 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 RING1Q06587 406 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 NR1H3Q13133 447 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 RUNX3Q13761 415 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 TRIP4Q15650 581 aaPredicted RBP13.82□□□□□ -0.2
CKAP2-202ENST00000378034 MLF2Q15773 248 aaPredicted RBP13.82□□□□□ -0.2
CKAP2-202ENST00000378034 EML3Q32P44 896 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 CPA6Q8N4T0 437 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 TTC16Q8NEE8 873 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 OLIG1Q8TAK6 271 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 DQX1Q8TE96 717 aaKnown RBP13.82□□□□□ -0.2
CKAP2-202ENST00000378034 PIWIL1Q96J94 861 aaKnown RBP13.82□□□□□ -0.2
CKAP2-202ENST00000378034 C1QTNF1Q9BXJ1 281 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 WNT6Q9Y6F9 365 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 AKR1B15C9JRZ8 316 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms