RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 GOLGA8KD6RF30 607 aa16.33■□□□□ 0.21
HDAC8-209ENST00000373589 M0QYT0 321 aa16.33■□□□□ 0.21
HDAC8-209ENST00000373589 SGK1O00141 431 aa16.33■□□□□ 0.21
HDAC8-209ENST00000373589 DNALI1O14645 258 aaPredicted RBP16.33■□□□□ 0.21
HDAC8-209ENST00000373589 APOL1O14791 398 aa16.33■□□□□ 0.21
HDAC8-209ENST00000373589 MCF2LO15068 1137 aa16.33■□□□□ 0.21
HDAC8-209ENST00000373589 CYP2C18P33260 490 aa16.33■□□□□ 0.21
HDAC8-209ENST00000373589 SLC11A1P49279 550 aa16.33■□□□□ 0.21
HDAC8-209ENST00000373589 EIF3EP60228 445 aaKnown RBP16.33■□□□□ 0.21
HDAC8-209ENST00000373589 SCN5AQ14524 2016 aa16.33■□□□□ 0.21
HDAC8-209ENST00000373589 P3H1Q32P28 736 aa16.33■□□□□ 0.21
HDAC8-209ENST00000373589 PPP6R3Q5H9R7 873 aaPredicted RBP16.33■□□□□ 0.21
HDAC8-209ENST00000373589 VARS2Q5ST30 1063 aaKnown RBP16.33■□□□□ 0.21
HDAC8-209ENST00000373589 HIBCHQ6NVY1 386 aaPredicted RBP16.33■□□□□ 0.21
HDAC8-209ENST00000373589 NPNTQ6UXI9 565 aa16.33■□□□□ 0.21
HDAC8-209ENST00000373589 CTU1Q7Z7A3 348 aaKnown RBP16.33■□□□□ 0.21
HDAC8-209ENST00000373589 SPATA2LQ8IUW3 424 aaPredicted RBP16.33■□□□□ 0.21
HDAC8-209ENST00000373589 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.33■□□□□ 0.21
HDAC8-209ENST00000373589 P3H4Q92791 437 aa16.33■□□□□ 0.21
HDAC8-209ENST00000373589 SLC9A7Q96T83 725 aa16.33■□□□□ 0.21
HDAC8-209ENST00000373589 MAGEB5Q9BZ81 275 aa16.33■□□□□ 0.21
HDAC8-209ENST00000373589 TSPYL1Q9H0U9 437 aa16.33■□□□□ 0.21
HDAC8-209ENST00000373589 MARCH5Q9NX47 278 aa16.33■□□□□ 0.21
HDAC8-209ENST00000373589 RRN3Q9NYV6 651 aa16.33■□□□□ 0.21
HDAC8-209ENST00000373589 VPS18Q9P253 973 aa16.33■□□□□ 0.21
HDAC8-209ENST00000373589 TBX21Q9UL17 535 aa16.33■□□□□ 0.21
HDAC8-209ENST00000373589 TNFRSF10BO14763 440 aa16.33■□□□□ 0.2
HDAC8-209ENST00000373589 ALDH2P05091 517 aa16.33■□□□□ 0.2
HDAC8-209ENST00000373589 OR4Q2P0C623 313 aa16.33■□□□□ 0.2
HDAC8-209ENST00000373589 RBP3P10745 1247 aa16.33■□□□□ 0.2
HDAC8-209ENST00000373589 CYP2F1P24903 491 aa16.33■□□□□ 0.2
HDAC8-209ENST00000373589 GDF10P55107 478 aa16.33■□□□□ 0.2
HDAC8-209ENST00000373589 DEUP1Q05D60 604 aa16.33■□□□□ 0.2
HDAC8-209ENST00000373589 GABPB1Q06547 395 aaPredicted RBP16.33■□□□□ 0.2
HDAC8-209ENST00000373589 SLC39A12Q504Y0 691 aa16.33■□□□□ 0.2
HDAC8-209ENST00000373589 DCP1BQ8IZD4 617 aaKnown RBP16.33■□□□□ 0.2
HDAC8-209ENST00000373589 ARL8AQ96BM9 186 aa16.33■□□□□ 0.2
HDAC8-209ENST00000373589 COLEC11Q9BWP8 271 aa16.33■□□□□ 0.2
HDAC8-209ENST00000373589 MRPL9Q9BYD2 267 aaKnown RBP16.33■□□□□ 0.2
HDAC8-209ENST00000373589 GPR62Q9BZJ7 368 aa16.33■□□□□ 0.2
HDAC8-209ENST00000373589 SEMA4AQ9H3S1 761 aa16.33■□□□□ 0.2
HDAC8-209ENST00000373589 C10orf88Q9H8K7 445 aa16.33■□□□□ 0.2
HDAC8-209ENST00000373589 WDR6Q9NNW5 1121 aaKnown RBP16.33■□□□□ 0.2
HDAC8-209ENST00000373589 PIGVQ9NUD9 493 aa16.33■□□□□ 0.2
HDAC8-209ENST00000373589 RCOR3Q9P2K3 495 aaPredicted RBP16.33■□□□□ 0.2
HDAC8-209ENST00000373589 HCSTQ9UBK5 93 aa16.33■□□□□ 0.2
HDAC8-209ENST00000373589 CAPN9O14815 690 aa16.32■□□□□ 0.2
HDAC8-209ENST00000373589 NUDT17P0C025 328 aa16.32■□□□□ 0.2
HDAC8-209ENST00000373589 NCAM1P13591 858 aa16.32■□□□□ 0.2
HDAC8-209ENST00000373589 FGFR3P22607 806 aa16.32■□□□□ 0.2
HDAC8-209ENST00000373589 CHKAP35790 457 aa16.32■□□□□ 0.2
HDAC8-209ENST00000373589 BCAR1P56945 870 aa16.32■□□□□ 0.2
HDAC8-209ENST00000373589 ZNF844Q08AG5 666 aa16.32■□□□□ 0.2
HDAC8-209ENST00000373589 GPS1Q13098 491 aa16.32■□□□□ 0.2
HDAC8-209ENST00000373589 TTMPQ5BVD1 217 aa16.32■□□□□ 0.2
HDAC8-209ENST00000373589 BEND5Q7L4P6 421 aa16.32■□□□□ 0.2
HDAC8-209ENST00000373589 UNC45BQ8IWX7 931 aa16.32■□□□□ 0.2
HDAC8-209ENST00000373589 GOLGA6L1Q8N7Z2 621 aa16.32■□□□□ 0.2
HDAC8-209ENST00000373589 OR2W6PQ8NHA6 318 aa16.32■□□□□ 0.2
HDAC8-209ENST00000373589 SLC7A14Q8TBB6 771 aa16.32■□□□□ 0.2
HDAC8-209ENST00000373589 DIS3LQ8TF46 1054 aaKnown RBP16.32■□□□□ 0.2
HDAC8-209ENST00000373589 VWCEQ96DN2 955 aa16.32■□□□□ 0.2
HDAC8-209ENST00000373589 FUBP3Q96I24 572 aaKnown RBP eCLIP16.32■□□□□ 0.2
HDAC8-209ENST00000373589 CSPG4P5Q96PW8 444 aa16.32■□□□□ 0.2
HDAC8-209ENST00000373589 TMEM175Q9BSA9 504 aa16.32■□□□□ 0.2
HDAC8-209ENST00000373589 CWC15Q9P013 229 aaKnown RBP16.32■□□□□ 0.2
HDAC8-209ENST00000373589 TBKBP1A7MCY6 615 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 IFNB1P01574 187 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 GALTP07902 379 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 STIP1P31948 543 aaKnown RBP16.31■□□□□ 0.2
HDAC8-209ENST00000373589 GYS2P54840 703 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 AIF1P55008 147 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 NME3Q13232 169 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 NFE2Q16621 373 aaPredicted RBP16.31■□□□□ 0.2
HDAC8-209ENST00000373589 FAM171A1Q5VUB5 890 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 C1orf228Q6PIY5 440 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 DEFB128Q7Z7B8 93 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 PYROXD2Q8N2H3 581 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 SCAMP5Q8TAC9 235 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 RSAD2Q8WXG1 361 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 NTAN1Q96AB6 310 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 FOXP3Q9BZS1 431 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 TPX2Q9ULW0 747 aaKnown RBP16.31■□□□□ 0.2
HDAC8-209ENST00000373589 SF3B1O75533 1304 aaKnown RBP eCLIP16.31■□□□□ 0.22e-6■■■■■ 101.5
HDAC8-209ENST00000373589 PATJQ8NI35 1801 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 ZFXP17010 805 aaPredicted RBP16.31■□□□□ 0.2
HDAC8-209ENST00000373589 GRIK1P39086 918 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 SLC5A3P53794 718 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 EIF3BP55884 814 aaKnown RBP16.31■□□□□ 0.2
HDAC8-209ENST00000373589 ROR1Q01973 937 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 SCAPQ12770 1279 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 CEP85LQ5SZL2 805 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 RNASEH2BQ5TBB1 312 aaKnown RBP16.31■□□□□ 0.2
HDAC8-209ENST00000373589 BSPRYQ5W0U4 402 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 TRMT10CQ7L0Y3 403 aaKnown RBP16.31■□□□□ 0.2
HDAC8-209ENST00000373589 RELL1Q8IUW5 271 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 ZCCHC9Q8N567 271 aaKnown RBP16.31■□□□□ 0.2
HDAC8-209ENST00000373589 FAM71DQ8N9W8 422 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 PRDM16Q9HAZ2 1276 aa16.31■□□□□ 0.2
HDAC8-209ENST00000373589 ADAM21Q9UKJ8 722 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms