RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 FRMD8Q9BZ67 464 aaPredicted RBP14.34□□□□□ -0.11
COL6A1-201ENST00000361866 KCNK4Q9NYG8 393 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 TSPAN16Q9UKR8 245 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 AHCYL1O43865 530 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 PMPCBO75439 489 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 FDX1P10109 184 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 THRAP10827 490 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 SP100P23497 879 aaPredicted RBP14.34□□□□□ -0.11
COL6A1-201ENST00000361866 TBCCQ15814 346 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 ITPRIPL1Q6GPH6 555 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 SCN4BQ8IWT1 228 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 CPB2Q96IY4 423 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 VPS33BQ9H267 617 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 TAS2R1Q9NYW7 299 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 KLK14Q9P0G3 267 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 DCDC2Q9UHG0 476 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 ZNRF3Q9ULT6 936 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 AP4E1Q9UPM8 1137 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 ERVK-10P10266 1014 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 PSMC3P17980 439 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 IL10P22301 178 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 ACSBG2Q5FVE4 666 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 CYP2R1Q6VVX0 501 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 PTAR1Q7Z6K3 402 aaPredicted RBP14.34□□□□□ -0.11
COL6A1-201ENST00000361866 ZBTB46Q86UZ6 589 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 WDR49Q8IV35 697 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 TNS4Q8IZW8 715 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 ASAP3Q8TDY4 903 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 PDCD6IPQ8WUM4 868 aaKnown RBP14.34□□□□□ -0.11
COL6A1-201ENST00000361866 NCLNQ969V3 563 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 SEMA6AQ9H2E6 1030 aa14.34□□□□□ -0.11
COL6A1-201ENST00000361866 IARS2Q9NSE4 1012 aaKnown RBP14.34□□□□□ -0.11
COL6A1-201ENST00000361866 DRG1Q9Y295 367 aaKnown RBP14.34□□□□□ -0.11
COL6A1-201ENST00000361866 M0QYT0 321 aa14.33□□□□□ -0.11
COL6A1-201ENST00000361866 GFAPP14136 432 aa14.33□□□□□ -0.11
COL6A1-201ENST00000361866 TCF4P15884 667 aa14.33□□□□□ -0.11
COL6A1-201ENST00000361866 HDAC4P56524 1084 aa14.33□□□□□ -0.11
COL6A1-201ENST00000361866 PDK1Q15118 436 aa14.33□□□□□ -0.11
COL6A1-201ENST00000361866 ANO4Q32M45 955 aa14.33□□□□□ -0.11
COL6A1-201ENST00000361866 SEL1L3Q68CR1 1132 aa14.33□□□□□ -0.11
COL6A1-201ENST00000361866 MICALL2Q8IY33 904 aa14.33□□□□□ -0.11
COL6A1-201ENST00000361866 PBXIP1Q96AQ6 731 aa14.33□□□□□ -0.11
COL6A1-201ENST00000361866 MARK4Q96L34 752 aa14.33□□□□□ -0.11
COL6A1-201ENST00000361866 EBF2Q9HAK2 575 aa14.33□□□□□ -0.11
COL6A1-201ENST00000361866 ETAA1Q9NY74 926 aa14.33□□□□□ -0.11
COL6A1-201ENST00000361866 SLC5A4Q9NY91 659 aa14.33□□□□□ -0.11
COL6A1-201ENST00000361866 ANGPT2O15123 496 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 CFHP08603 1231 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 CD48P09326 243 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 CETPP11597 493 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 MAP4P27816 1152 aaKnown RBP14.33□□□□□ -0.12
COL6A1-201ENST00000361866 NDST1P52848 882 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 CNTN2Q02246 1040 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 TDRD5Q8NAT2 981 aaKnown RBP14.33□□□□□ -0.12
COL6A1-201ENST00000361866 SH3TC2Q8TF17 1288 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 CNDP1Q96KN2 507 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 PHACTR1Q9C0D0 580 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 EFCAB1Q9HAE3 211 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 SERPINE1P05121 402 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 NELFEP18615 380 aaKnown RBP14.33□□□□□ -0.12
COL6A1-201ENST00000361866 ACAP1Q15027 740 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 ARMC3Q5W041 872 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 ASCC2Q9H1I8 757 aaPredicted RBP14.33□□□□□ -0.12
COL6A1-201ENST00000361866 ARHGEF37A1IGU5 675 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 TMEM191CA6NGB0 347 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 CST3P01034 146 aaPredicted RBP14.33□□□□□ -0.12
COL6A1-201ENST00000361866 ITGAVP06756 1048 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 PGK2P07205 417 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 FGFR3P22607 806 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 PTK2BQ14289 1009 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 TTLL4Q14679 1199 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 RINLQ6ZS11 566 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 CPT1BQ92523 772 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 PLEKHA5Q9HAU0 1116 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 IL1RAPL1Q9NZN1 696 aa14.33□□□□□ -0.12
COL6A1-201ENST00000361866 RUVBL2Q9Y230 463 aaKnown RBP14.33□□□□□ -0.12
COL6A1-201ENST00000361866 PEX11AO75192 247 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 STAG3L1P0CL83 205 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 VDRP11473 427 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 GRK2P25098 689 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 PEX6Q13608 980 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 ZC3H12AQ5D1E8 599 aaKnown RBP14.32□□□□□ -0.12
COL6A1-201ENST00000361866 APLFQ8IW19 511 aaPredicted RBP14.32□□□□□ -0.12
COL6A1-201ENST00000361866 OR6Y1Q8NGX8 325 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 WNK4Q96J92 1243 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 STX18Q9P2W9 335 aaKnown RBP14.32□□□□□ -0.12
COL6A1-201ENST00000361866 TBX10O75333 385 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 MICAL2O94851 1124 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 CHEK2O96017 543 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 CCNE2O96020 404 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 EIF4BP23588 611 aaKnown RBP14.32□□□□□ -0.12
COL6A1-201ENST00000361866 ADSSP30520 456 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 GNL1P36915 607 aaPredicted RBP14.32□□□□□ -0.12
COL6A1-201ENST00000361866 GAD2Q05329 585 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 USP4Q13107 963 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 TTC33Q6PID6 262 aaPredicted RBP14.32□□□□□ -0.12
COL6A1-201ENST00000361866 MPZL3Q6UWV2 235 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 BBS12Q6ZW61 710 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 FAM228AQ86W67 206 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 KYQ8NBH2 561 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms