RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 USP15Q9Y4E8 981 aaPredicted RBP19.16■□□□□ 0.66
CLIP2-202ENST00000361545 SKAP2O75563 359 aaPredicted RBP19.15■□□□□ 0.66
CLIP2-202ENST00000361545 CASP5P51878 434 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 POLE2P56282 527 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 DLG4P78352 724 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 ZNF268Q14587 947 aaPredicted RBP19.15■□□□□ 0.66
CLIP2-202ENST00000361545 MFSD4BQ5TF39 518 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 ICA1LQ8NDH6 482 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 LPPQ93052 612 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 SERPINB11Q96P15 392 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 SYT17Q9BSW7 474 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 GIMAP4Q9NUV9 329 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 AMPD1P23109 780 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 POTEAQ6S8J7 498 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 ERP27Q96DN0 273 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 SCHIP1Q9P0W5 487 aaPredicted RBP19.15■□□□□ 0.66
CLIP2-202ENST00000361545 NR2E3Q9Y5X4 410 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 CDY1Q9Y6F8 540 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 GJB1P08034 283 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 STARD3Q14849 445 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 POU6F1Q14863 301 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 ZC3H12BQ5HYM0 836 aaKnown RBP19.15■□□□□ 0.66
CLIP2-202ENST00000361545 NLGN2Q8NFZ4 835 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 EPS8L3Q8TE67 593 aaKnown RBP19.15■□□□□ 0.66
CLIP2-202ENST00000361545 IL17RAQ96F46 866 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 STN1Q9H668 368 aaKnown RBP19.15■□□□□ 0.66
CLIP2-202ENST00000361545 E5RJQ4 531 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 FLT3LGP49771 235 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 PRUNE1Q86TP1 453 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 MDM1Q8TC05 714 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 UBE2OQ9C0C9 1292 aaKnown RBP19.15■□□□□ 0.66
CLIP2-202ENST00000361545 CYP4F12Q9HCS2 524 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 TPH1P17752 444 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 INPP5AQ14642 412 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 ICE2Q659A1 982 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 ANO5Q75V66 913 aa19.15■□□□□ 0.66
CLIP2-202ENST00000361545 ZNF473Q8WTR7 871 aaKnown RBP19.15■□□□□ 0.66
CLIP2-202ENST00000361545 MYO1GB0I1T2 1018 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 PIK3CDO00329 1044 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 SCAMP3O14828 347 aaKnown RBP19.14■□□□□ 0.65
CLIP2-202ENST00000361545 H2AFYO75367 372 aaKnown RBP19.14■□□□□ 0.65
CLIP2-202ENST00000361545 RTN3O95197 1032 aaPredicted RBP19.14■□□□□ 0.65
CLIP2-202ENST00000361545 KCNK10P57789 538 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 C16orf59Q7L2K0 433 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 ARID3BQ8IVW6 561 aaPredicted RBP19.14■□□□□ 0.65
CLIP2-202ENST00000361545 PCYOX1LQ8NBM8 494 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 ULBP1Q9BZM6 244 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 YY1AP1Q9H869 796 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 PDHA1P08559 390 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 NFICP08651 508 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 STRA8Q7Z7C7 330 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 CCNJLQ8IV13 435 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 DACH2Q96NX9 599 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 PIH1D1Q9NWS0 290 aaKnown RBP19.14■□□□□ 0.65
CLIP2-202ENST00000361545 ZNF541Q9H0D2 1346 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 O00370 1275 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 SERPINF2P08697 491 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 SERPINB4P48594 390 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 SARSP49591 514 aaKnown RBP19.14■□□□□ 0.65
CLIP2-202ENST00000361545 MYO1HQ8N1T3 1032 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 TMEM134Q9H6X4 195 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 A0A0A6YYK5 440 aaPredicted RBP19.14■□□□□ 0.65
CLIP2-202ENST00000361545 PAEPP09466 180 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 PLIN5Q00G26 463 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 DNAJC3Q13217 504 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 RD3Q7Z3Z2 195 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 C17orf80Q9BSJ5 609 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 FAM129AQ9BZQ8 928 aa19.14■□□□□ 0.65
CLIP2-202ENST00000361545 GLP2RO95838 553 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 VCLP18206 1134 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 VPS37AQ8NEZ2 397 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 DTX3LQ8TDB6 740 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 HELQQ8TDG4 1101 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 PABPC3Q9H361 631 aaKnown RBP19.13■□□□□ 0.65
CLIP2-202ENST00000361545 MRPL17Q9NRX2 175 aaKnown RBP19.13■□□□□ 0.65
CLIP2-202ENST00000361545 KIF1AQ12756 1690 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 CALCAP01258 141 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 ITGB5P18084 799 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 CD52P31358 61 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 RAD23BP54727 409 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 TPGS1Q6ZTW0 290 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 PATL1Q86TB9 770 aaKnown RBP19.13■□□□□ 0.65
CLIP2-202ENST00000361545 ZDHHC17Q8IUH5 632 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 ZSWIM2Q8NEG5 633 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 DEFB118Q96PH6 123 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 PFDN1O60925 122 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 SEC24DO94855 1032 aaPredicted RBP19.13■□□□□ 0.65
CLIP2-202ENST00000361545 FKBP1BP68106 108 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 SLC6A3Q01959 620 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 CAMK2GQ13555 558 aaPredicted RBP19.13■□□□□ 0.65
CLIP2-202ENST00000361545 CCNG2Q16589 344 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 RARS2Q5T160 578 aaKnown RBP19.13■□□□□ 0.65
CLIP2-202ENST00000361545 NYAP1Q6ZVC0 841 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 NFKBIZQ9BYH8 718 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 GLTPD2A6NH11 291 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 EIF4E1BA6NMX2 242 aaKnown RBP19.13■□□□□ 0.65
CLIP2-202ENST00000361545 MAFO75444 373 aaPredicted RBP19.13■□□□□ 0.65
CLIP2-202ENST00000361545 ELNP15502 786 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 PPP3CAQ08209 521 aa19.13■□□□□ 0.65
CLIP2-202ENST00000361545 OVGP1Q12889 678 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms