RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 A0A1W2PQH9 124 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 ANTXRLA6NF34 631 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 C4orf47A7E2U8 309 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 NEDD8-MDP1E9PL57 170 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 TM4SF5O14894 197 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 CILPO75339 1184 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 TYRP14679 529 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 NTSR1P30989 418 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 P2RY2P41231 377 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 DPP6P42658 865 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 PGFP49763 221 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 MESP2Q0VG99 397 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 SPDYCQ5MJ68 293 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 PPP1R26Q5T8A7 1209 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-204ENST00000356316 TCEAL6Q6IPX3 200 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 KLHDC10Q6PID8 442 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 ETFBKMTQ8IXQ9 262 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 TMEFF1Q8IYR6 380 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 CHPFQ8IZ52 775 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 ARHGAP18Q8N392 663 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 TERB1Q8NA31 727 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 FBXL13Q8NEE6 735 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 OLIG1Q8TAK6 271 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 RLN3Q8WXF3 142 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 NUP205Q92621 2012 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 TCEAL3Q969E4 200 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 TMEM176AQ96HP8 235 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 NUSAP1Q9BXS6 441 aaKnown RBP11.22□□□□□ -0.61
CAPN3-204ENST00000356316 APOBEC3GQ9HC16 384 aaKnown RBP11.22□□□□□ -0.61
CAPN3-204ENST00000356316 TMEM9BQ9NQ34 198 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.22□□□□□ -0.61
CAPN3-204ENST00000356316 RAB20Q9NX57 234 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 HOOK1Q9UJC3 728 aaKnown RBP11.22□□□□□ -0.61
CAPN3-204ENST00000356316 ZNF510Q9Y2H8 683 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 STARD13Q9Y3M8 1113 aa11.22□□□□□ -0.61
CAPN3-204ENST00000356316 HHLA1C9JL84 531 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 AP5Z1O43299 807 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 ADAM23O75077 832 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 SMC2O95347 1197 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 HOXB2P14652 356 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 BCKDHBP21953 392 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 CHKAP35790 457 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 WASP42768 502 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 DGKGP49619 791 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 MXI1P50539 228 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 KIF11P52732 1056 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 COG7P83436 770 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 LMAN2Q12907 356 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 E2F5Q15329 346 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 N4BP2L1Q5TBK1 243 aaPredicted RBP11.21□□□□□ -0.61
CAPN3-204ENST00000356316 TCERG1LQ5VWI1 586 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 SLC36A4Q6YBV0 504 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 RSRC2Q7L4I2 434 aaKnown RBP11.21□□□□□ -0.61
CAPN3-204ENST00000356316 GPRIN1Q7Z2K8 1008 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 CCDC186Q7Z3E2 898 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 MIB1Q86YT6 1006 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 PHTF2Q8N3S3 785 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 ZNF276Q8N554 614 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 WBP2Q969T9 261 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 EEF2KMTQ96G04 330 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 GTPBP4Q9BZE4 634 aaKnown RBP11.21□□□□□ -0.61
CAPN3-204ENST00000356316 UBXN6Q9BZV1 441 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 DCLK3Q9C098 648 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 FAM124BQ9H5Z6 455 aaPredicted RBP11.21□□□□□ -0.61
CAPN3-204ENST00000356316 NMUR1Q9HB89 426 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 CISHQ9NSE2 258 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 RYDENQ9NUL5 291 aaKnown RBP11.21□□□□□ -0.61
CAPN3-204ENST00000356316 OSER1Q9NX31 292 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 CLIC5Q9NZA1 410 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 NUDT5Q9UKK9 219 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 ANGPTL2Q9UKU9 493 aa11.21□□□□□ -0.61
CAPN3-204ENST00000356316 LNP1A1A4G5 178 aa11.2□□□□□ -0.62
CAPN3-204ENST00000356316 CACNG3O60359 315 aa11.2□□□□□ -0.62
CAPN3-204ENST00000356316 ZNF217O75362 1048 aa11.2□□□□□ -0.62
CAPN3-204ENST00000356316 KCNK5O95279 499 aa11.2□□□□□ -0.62
CAPN3-204ENST00000356316 CYBBP04839 570 aa11.2□□□□□ -0.62
CAPN3-204ENST00000356316 HNRNPLP14866 589 aaKnown RBP eCLIP11.2□□□□□ -0.62
CAPN3-204ENST00000356316 ATXN3P54252 364 aaPredicted RBP11.2□□□□□ -0.62
CAPN3-204ENST00000356316 YWHAEP62258 255 aaKnown RBP11.2□□□□□ -0.62
CAPN3-204ENST00000356316 IRX4P78413 519 aa11.2□□□□□ -0.62
CAPN3-204ENST00000356316 FKBP3Q00688 224 aaKnown RBP11.2□□□□□ -0.62
CAPN3-204ENST00000356316 RPL6Q02878 288 aaKnown RBP11.2□□□□□ -0.62
CAPN3-204ENST00000356316 EFEMP1Q12805 493 aa11.2□□□□□ -0.62
CAPN3-204ENST00000356316 DCAF17Q5H9S7 520 aaPredicted RBP11.2□□□□□ -0.62
CAPN3-204ENST00000356316 ZNF658Q5TYW1 1059 aaPredicted RBP11.2□□□□□ -0.62
CAPN3-204ENST00000356316 ARMCX6Q7L4S7 300 aa11.2□□□□□ -0.62
CAPN3-204ENST00000356316 SYT12Q8IV01 421 aa11.2□□□□□ -0.62
CAPN3-204ENST00000356316 SMYD4Q8IYR2 804 aaPredicted RBP11.2□□□□□ -0.62
CAPN3-204ENST00000356316 BHMTQ93088 406 aa11.2□□□□□ -0.62
CAPN3-204ENST00000356316 GOLPH3LQ9H4A5 285 aa11.2□□□□□ -0.62
CAPN3-204ENST00000356316 GDPD2Q9HCC8 539 aa11.2□□□□□ -0.62
CAPN3-204ENST00000356316 MARK1Q9P0L2 795 aa11.2□□□□□ -0.62
CAPN3-204ENST00000356316 RASAL2Q9UJF2 1139 aa11.2□□□□□ -0.62
CAPN3-204ENST00000356316 STRIP2Q9ULQ0 834 aa11.2□□□□□ -0.62
CAPN3-204ENST00000356316 BOLA1Q9Y3E2 137 aa11.2□□□□□ -0.62
CAPN3-204ENST00000356316 USP3Q9Y6I4 520 aa11.2□□□□□ -0.62
CAPN3-204ENST00000356316 ABCA7Q8IZY2 2146 aa11.2□□□□□ -0.62
CAPN3-204ENST00000356316 CEP192Q8TEP8 1941 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 MDM4O15151 490 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms