RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 LRIG3Q6UXM1 1119 aa18.33■□□□□ 0.53
NPAS3-202ENST00000356141 TOP6BLQ8N6T0 577 aa18.33■□□□□ 0.53
NPAS3-202ENST00000356141 LGMNQ99538 433 aa18.33■□□□□ 0.53
NPAS3-202ENST00000356141 PPP1R12CQ9BZL4 782 aa18.33■□□□□ 0.53
NPAS3-202ENST00000356141 KIF9Q9HAQ2 790 aa18.33■□□□□ 0.53
NPAS3-202ENST00000356141 KCNK9Q9NPC2 374 aa18.33■□□□□ 0.53
NPAS3-202ENST00000356141 HOMER3Q9NSC5 361 aa18.33■□□□□ 0.53
NPAS3-202ENST00000356141 LCMT1Q9UIC8 334 aa18.33■□□□□ 0.53
NPAS3-202ENST00000356141 HMGB1P1B2RPK0 211 aaPredicted RBP18.33■□□□□ 0.52
NPAS3-202ENST00000356141 MYO1CO00159 1063 aa18.33■□□□□ 0.52
NPAS3-202ENST00000356141 TMED2Q15363 201 aa18.33■□□□□ 0.52
NPAS3-202ENST00000356141 LINC01599Q8WXQ3 324 aa18.33■□□□□ 0.52
NPAS3-202ENST00000356141 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.33■□□□□ 0.522e-6■■■■■ 52.6
NPAS3-202ENST00000356141 CPT1BQ92523 772 aa18.33■□□□□ 0.52
NPAS3-202ENST00000356141 RAB6BQ9NRW1 208 aa18.33■□□□□ 0.52
NPAS3-202ENST00000356141 SLC38A7Q9NVC3 462 aa18.33■□□□□ 0.52
NPAS3-202ENST00000356141 CWC15Q9P013 229 aaKnown RBP18.33■□□□□ 0.52
NPAS3-202ENST00000356141 YWHAZP63104 245 aaKnown RBP18.32■□□□□ 0.52
NPAS3-202ENST00000356141 ERMARDQ5T6L9 678 aa18.32■□□□□ 0.52
NPAS3-202ENST00000356141 DEFB128Q7Z7B8 93 aa18.32■□□□□ 0.52
NPAS3-202ENST00000356141 ECHDC2Q86YB7 292 aa18.32■□□□□ 0.52
NPAS3-202ENST00000356141 EIF1ADQ8N9N8 165 aaKnown RBP18.32■□□□□ 0.52
NPAS3-202ENST00000356141 SLCO2A1Q92959 643 aa18.32■□□□□ 0.52
NPAS3-202ENST00000356141 ABI2Q9NYB9 513 aaPredicted RBP18.32■□□□□ 0.52
NPAS3-202ENST00000356141 CHMP2BQ9UQN3 213 aa18.32■□□□□ 0.52
NPAS3-202ENST00000356141 ZNF638Q14966 1978 aaKnown RBP18.32■□□□□ 0.52
NPAS3-202ENST00000356141 APOC4-APOC2K7ER74 178 aa18.32■□□□□ 0.52
NPAS3-202ENST00000356141 APOL1O14791 398 aa18.32■□□□□ 0.52
NPAS3-202ENST00000356141 XPO1O14980 1071 aaKnown RBP18.32■□□□□ 0.52
NPAS3-202ENST00000356141 TTC4O95801 387 aa18.32■□□□□ 0.52
NPAS3-202ENST00000356141 APOC2P02655 101 aa18.32■□□□□ 0.52
NPAS3-202ENST00000356141 PCK1P35558 622 aa18.32■□□□□ 0.52
NPAS3-202ENST00000356141 COPS2P61201 443 aa18.32■□□□□ 0.52
NPAS3-202ENST00000356141 MRPS5P82675 430 aaKnown RBP18.32■□□□□ 0.52
NPAS3-202ENST00000356141 OLIG2Q13516 323 aa18.32■□□□□ 0.52
NPAS3-202ENST00000356141 AUHQ13825 339 aaKnown RBP18.32■□□□□ 0.52
NPAS3-202ENST00000356141 CLLU1OSQ5K130 101 aa18.32■□□□□ 0.52
NPAS3-202ENST00000356141 LHX8Q68G74 356 aa18.32■□□□□ 0.52
NPAS3-202ENST00000356141 TTC39CQ8N584 583 aa18.32■□□□□ 0.52
NPAS3-202ENST00000356141 HNRNPABQ99729 332 aaKnown RBP18.32■□□□□ 0.52
NPAS3-202ENST00000356141 UNC93B1Q9H1C4 597 aa18.32■□□□□ 0.52
NPAS3-202ENST00000356141 HMX1Q9NP08 348 aaPredicted RBP18.32■□□□□ 0.52
NPAS3-202ENST00000356141 XPO7Q9UIA9 1087 aaKnown RBP18.32■□□□□ 0.52
NPAS3-202ENST00000356141 I6L893 689 aaPredicted RBP18.31■□□□□ 0.52
NPAS3-202ENST00000356141 L1CAMP32004 1257 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 LSP1P33241 339 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 FAM117BQ6P1L5 589 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 SLC26A9Q7LBE3 791 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 TTC9BQ8N6N2 239 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 GDAP1Q8TB36 358 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 DEFB118Q96PH6 123 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 SIK2Q9H0K1 926 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 KIAA0100Q14667 2235 aaKnown RBP18.31■□□□□ 0.52
NPAS3-202ENST00000356141 GABRDO14764 452 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 SPAG7O75391 227 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 PPP2R2AP63151 447 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 TRIM71Q2Q1W2 868 aaKnown RBP18.31■□□□□ 0.52
NPAS3-202ENST00000356141 RNASEH2BQ5TBB1 312 aaKnown RBP18.31■□□□□ 0.52
NPAS3-202ENST00000356141 OTUD1Q5VV17 481 aaPredicted RBP18.31■□□□□ 0.52
NPAS3-202ENST00000356141 SRRM1Q8IYB3 904 aaKnown RBP18.31■□□□□ 0.52
NPAS3-202ENST00000356141 CCNYQ8ND76 341 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 DBF4BQ8NFT6 615 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 RNF217Q8TC41 542 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 RNF34Q969K3 372 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 KLF6Q99612 283 aaPredicted RBP18.31■□□□□ 0.52
NPAS3-202ENST00000356141 PAIP2Q9BPZ3 127 aaKnown RBP18.31■□□□□ 0.52
NPAS3-202ENST00000356141 DDIT4Q9NX09 232 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 GIT1Q9Y2X7 761 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 ZBED1O96006 694 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 FYNP06241 537 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 ITGAVP06756 1048 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 APRTP07741 180 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 F7P08709 466 aaPredicted RBP18.31■□□□□ 0.52
NPAS3-202ENST00000356141 SETSIPP0DME0 302 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 GRK4P32298 578 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 GRIA1P42261 906 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 DEUP1Q05D60 604 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 OVOS1Q6IE37 1185 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 DNAJC14Q6Y2X3 702 aaPredicted RBP18.31■□□□□ 0.52
NPAS3-202ENST00000356141 FAF2Q96CS3 445 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 MTMR10Q9NXD2 777 aa18.31■□□□□ 0.52
NPAS3-202ENST00000356141 RALGAPA2Q2PPJ7 1873 aa18.3■□□□□ 0.52
NPAS3-202ENST00000356141 MSI1O43347 362 aaKnown RBP18.3■□□□□ 0.52
NPAS3-202ENST00000356141 CHN1P15882 459 aa18.3■□□□□ 0.52
NPAS3-202ENST00000356141 MDH1P40925 334 aaKnown RBP18.3■□□□□ 0.52
NPAS3-202ENST00000356141 IRF5Q13568 498 aa18.3■□□□□ 0.52
NPAS3-202ENST00000356141 SLC39A12Q504Y0 691 aa18.3■□□□□ 0.52
NPAS3-202ENST00000356141 CD300LGQ6UXG3 332 aa18.3■□□□□ 0.52
NPAS3-202ENST00000356141 KDM7AQ6ZMT4 941 aa18.3■□□□□ 0.52
NPAS3-202ENST00000356141 HOOK3Q86VS8 718 aa18.3■□□□□ 0.52
NPAS3-202ENST00000356141 IGDCC3Q8IVU1 814 aa18.3■□□□□ 0.52
NPAS3-202ENST00000356141 PRCCQ92733 491 aaPredicted RBP18.3■□□□□ 0.52
NPAS3-202ENST00000356141 NKD2Q969F2 451 aaPredicted RBP18.3■□□□□ 0.52
NPAS3-202ENST00000356141 FAXDC2Q96IV6 333 aa18.3■□□□□ 0.52
NPAS3-202ENST00000356141 C12orf65Q9H3J6 166 aaKnown RBP18.3■□□□□ 0.52
NPAS3-202ENST00000356141 NRDE2Q9H7Z3 1164 aa18.3■□□□□ 0.52
NPAS3-202ENST00000356141 NDUFAB1O14561 156 aa18.3■□□□□ 0.52
NPAS3-202ENST00000356141 HGSO14964 777 aaPredicted RBP18.3■□□□□ 0.52
NPAS3-202ENST00000356141 SRGAP2BP0DMP2 458 aa18.3■□□□□ 0.52
NPAS3-202ENST00000356141 MATKP42679 507 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms