RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 STXBP2Q15833 593 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 ARPINQ7Z6K5 226 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 ALYREFQ86V81 257 aaKnown RBP9.72□□□□□ -0.85
SMG6-202ENST00000354901 PHF13Q86YI8 300 aaPredicted RBP9.72□□□□□ -0.85
SMG6-202ENST00000354901 RNF149Q8NC42 400 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 BBOF1Q8ND07 529 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 TRAPPC12Q8WVT3 735 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 GAB3Q8WWW8 586 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 TTC17Q96AE7 1141 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 DRC3Q9H069 523 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 POLIQ9UNA4 740 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 STARD13Q9Y3M8 1113 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 CCDC195A0A1B0GUA6 201 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 TMEM191CA6NGB0 347 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 SPATA31C2B4DYI2 1134 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 H0YCG3 227 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 EDF1O60869 148 aaKnown RBP9.72□□□□□ -0.85
SMG6-202ENST00000354901 MAP3K6O95382 1288 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 TMEM191BP0C7N4 346 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 RFC1P35251 1148 aaPredicted RBP9.72□□□□□ -0.85
SMG6-202ENST00000354901 NAMPTP43490 491 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 GDF10P55107 478 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 SEPT6Q14141 434 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 BBS9Q3SYG4 887 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 ANGEL2Q5VTE6 544 aaKnown RBP9.72□□□□□ -0.85
SMG6-202ENST00000354901 DCAF15Q66K64 600 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 SLFN12LQ6IEE8 588 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 SLC2A7Q6PXP3 512 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 TRIM72Q6ZMU5 477 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 APOBEC3FQ8IUX4 373 aaKnown RBP9.72□□□□□ -0.85
SMG6-202ENST00000354901 RCOR2Q8IZ40 523 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 ARHGAP24Q8N264 748 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 GALNT4Q8N4A0 578 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 ZCCHC9Q8N567 271 aaKnown RBP9.72□□□□□ -0.85
SMG6-202ENST00000354901 CCDC110Q8TBZ0 833 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 LZICQ8WZA0 190 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 DGCR14Q96DF8 476 aaKnown RBP9.72□□□□□ -0.85
SMG6-202ENST00000354901 NLRP4Q96MN2 994 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 USP29Q9HBJ7 922 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 CNTNAP2Q9UHC6 1331 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 PEX1O43933 1283 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 CST8O60676 142 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 ZWINTO95229 277 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 CD48P09326 243 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 TBXAS1P24557 533 aaPredicted RBP9.72□□□□□ -0.85
SMG6-202ENST00000354901 GSTM4Q03013 218 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 C1QBPQ07021 282 aaKnown RBP9.72□□□□□ -0.85
SMG6-202ENST00000354901 ACVR2BQ13705 512 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 LPIN1Q14693 890 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 ANKRD22Q5VYY1 191 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 RHPN2Q8IUC4 686 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 TMEM35BQ8NCS4 154 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 JOSD2Q8TAC2 188 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 ACTL9Q8TC94 416 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 LRRN4Q8WUT4 740 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 HSPH1Q92598 858 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 CDHR1Q96JP9 859 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 RILPQ96NA2 401 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 TRNAU1APQ9NX07 287 aaKnown RBP9.72□□□□□ -0.85
SMG6-202ENST00000354901 EURLQ9NYK6 297 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 PTTG2Q9NZH5 202 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 ITM2BQ9Y287 266 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 TRIM17Q9Y577 477 aa9.72□□□□□ -0.85
SMG6-202ENST00000354901 INO80B-WBP1J3KQ70 363 aa9.71□□□□□ -0.85
SMG6-202ENST00000354901 ADCY6O43306 1168 aa9.71□□□□□ -0.85
SMG6-202ENST00000354901 OTUD4Q01804 1114 aaKnown RBP9.71□□□□□ -0.85
SMG6-202ENST00000354901 MOGSQ13724 837 aa9.71□□□□□ -0.85
SMG6-202ENST00000354901 TFDP1Q14186 410 aa9.71□□□□□ -0.85
SMG6-202ENST00000354901 ANKDD1AQ495B1 522 aa9.71□□□□□ -0.85
SMG6-202ENST00000354901 ZNF362Q5T0B9 420 aaPredicted RBP9.71□□□□□ -0.85
SMG6-202ENST00000354901 WDR78Q5VTH9 848 aa9.71□□□□□ -0.85
SMG6-202ENST00000354901 TRABD2AQ86V40 505 aa9.71□□□□□ -0.85
SMG6-202ENST00000354901 REPS2Q8NFH8 660 aa9.71□□□□□ -0.85
SMG6-202ENST00000354901 GDPD5Q8WTR4 605 aa9.71□□□□□ -0.85
SMG6-202ENST00000354901 NCSTNQ92542 709 aa9.71□□□□□ -0.85
SMG6-202ENST00000354901 TMEM120AQ9BXJ8 343 aa9.71□□□□□ -0.85
SMG6-202ENST00000354901 CALN1Q9BXU9 219 aa9.71□□□□□ -0.85
SMG6-202ENST00000354901 INO80BQ9C086 356 aaPredicted RBP9.71□□□□□ -0.85
SMG6-202ENST00000354901 DHX33Q9H6R0 707 aaKnown RBP9.71□□□□□ -0.85
SMG6-202ENST00000354901 SUN2Q9UH99 717 aa9.71□□□□□ -0.85
SMG6-202ENST00000354901 CIDEBQ9UHD4 219 aa9.71□□□□□ -0.85
SMG6-202ENST00000354901 CAPN8A6NHC0 703 aa9.71□□□□□ -0.86
SMG6-202ENST00000354901 STAM2O75886 525 aa9.71□□□□□ -0.86
SMG6-202ENST00000354901 VCLP18206 1134 aa9.71□□□□□ -0.86
SMG6-202ENST00000354901 KRT4P19013 534 aa9.71□□□□□ -0.86
SMG6-202ENST00000354901 UBA1P22314 1058 aaKnown RBP9.71□□□□□ -0.86
SMG6-202ENST00000354901 GCAP28676 217 aa9.71□□□□□ -0.86
SMG6-202ENST00000354901 PMLP29590 882 aa9.71□□□□□ -0.86
SMG6-202ENST00000354901 ENTPD1P49961 510 aa9.71□□□□□ -0.86
SMG6-202ENST00000354901 STAT5BP51692 787 aa9.71□□□□□ -0.86
SMG6-202ENST00000354901 ALDH18A1P54886 795 aaKnown RBP9.71□□□□□ -0.86
SMG6-202ENST00000354901 BASP1P80723 227 aaKnown RBP9.71□□□□□ -0.86
SMG6-202ENST00000354901 TAF5Q15542 800 aa9.71□□□□□ -0.86
SMG6-202ENST00000354901 MAPK6Q16659 721 aa9.71□□□□□ -0.86
SMG6-202ENST00000354901 LY6KQ17RY6 165 aa9.71□□□□□ -0.86
SMG6-202ENST00000354901 ZNF699Q32M78 642 aa9.71□□□□□ -0.86
SMG6-202ENST00000354901 THOC7Q6I9Y2 204 aaKnown RBP9.71□□□□□ -0.86
SMG6-202ENST00000354901 DENND1BQ6P3S1 775 aa9.71□□□□□ -0.86
SMG6-202ENST00000354901 ZNF75CPQ92670 426 aaPredicted RBP9.71□□□□□ -0.86
SMG6-202ENST00000354901 TRIM55Q9BYV6 548 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms