RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 GMPRP36959 345 aa18.77■□□□□ 0.6
PTP4A3-202ENST00000349124 RCN2Q14257 317 aa18.77■□□□□ 0.6
PTP4A3-202ENST00000349124 WDR78Q5VTH9 848 aa18.77■□□□□ 0.6
PTP4A3-202ENST00000349124 ACOT1Q86TX2 421 aa18.77■□□□□ 0.6
PTP4A3-202ENST00000349124 CLEC4CQ8WTT0 213 aa18.77■□□□□ 0.6
PTP4A3-202ENST00000349124 WASF2Q9Y6W5 498 aa18.77■□□□□ 0.6
PTP4A3-202ENST00000349124 DOCK1Q14185 1865 aa18.77■□□□□ 0.6
PTP4A3-202ENST00000349124 A6NHS1 94 aa18.77■□□□□ 0.59
PTP4A3-202ENST00000349124 H3BRJ5 948 aa18.77■□□□□ 0.59
PTP4A3-202ENST00000349124 APOL1O14791 398 aa18.77■□□□□ 0.59
PTP4A3-202ENST00000349124 PPEF2O14830 753 aa18.77■□□□□ 0.59
PTP4A3-202ENST00000349124 LGR5O75473 907 aa18.77■□□□□ 0.59
PTP4A3-202ENST00000349124 RARBP10826 455 aa18.77■□□□□ 0.59
PTP4A3-202ENST00000349124 TSHRP16473 764 aa18.77■□□□□ 0.59
PTP4A3-202ENST00000349124 MUM1Q2TAK8 710 aa18.77■□□□□ 0.59
PTP4A3-202ENST00000349124 GOLGA7BQ2TAP0 167 aa18.77■□□□□ 0.59
PTP4A3-202ENST00000349124 C16orf46Q6P387 395 aa18.77■□□□□ 0.59
PTP4A3-202ENST00000349124 NDUFAF2Q8N183 169 aa18.77■□□□□ 0.59
PTP4A3-202ENST00000349124 SYT15Q9BQS2 421 aa18.77■□□□□ 0.59
PTP4A3-202ENST00000349124 NME7Q9Y5B8 376 aa18.77■□□□□ 0.59
PTP4A3-202ENST00000349124 SSC5DA1L4H1 1573 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 SMAPO00193 183 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 IL18RAPO95256 599 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 ADORA2AP29274 412 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 THOC5Q13769 683 aaKnown RBP18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 ACAP1Q15027 740 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 AMHR2Q16671 573 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 NBPF20Q3BBV1 942 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 FAM47CQ5HY64 1035 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 ZNF534Q76KX8 674 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 TTC30AQ86WT1 665 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 E2F7Q96AV8 911 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 EBF4Q9BQW3 602 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 YIPF3Q9GZM5 350 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 PDZD7Q9H5P4 517 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 GBA2Q9HCG7 927 aaPredicted RBP18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 ZFATQ9P243 1243 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 BARX2Q9UMQ3 279 aaPredicted RBP18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 KRT37O76014 449 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 ARF4P18085 180 aaPredicted RBP18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 PGM1P36871 562 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 AQP5P55064 265 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 SH3D19Q5HYK7 790 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 CCDC62Q6P9F0 684 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 PLPPR4Q7Z2D5 763 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 NUDCD3Q8IVD9 361 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 TEX9Q8N6V9 391 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 ZNF333Q96JL9 665 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 PGLYRP2Q96PD5 576 aa18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 CORO1CQ9ULV4 474 aaPredicted RBP18.76■□□□□ 0.59
PTP4A3-202ENST00000349124 DCAF8L1A6NGE4 600 aa18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 E7ENQ6 273 aa18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 FZD9O00144 591 aa18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 NVLO15381 856 aaKnown RBP18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 APOEP02649 317 aa18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 GCKP35557 465 aa18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 ALDH18A1P54886 795 aaKnown RBP18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 SCG3Q8WXD2 468 aaKnown RBP18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 SIGLEC10Q96LC7 697 aa18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 MRPL45Q9BRJ2 306 aaKnown RBP18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 PNPLA8Q9NP80 782 aa18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 CENPFP49454 3210 aa18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 SPDYE5A6NIY4 337 aa18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 IRF6O14896 467 aa18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 TXNP10599 105 aaKnown RBP18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 INSRRP14616 1297 aa18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 PRKCHP24723 683 aa18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 HDAC4P56524 1084 aa18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 LCLAT1Q6UWP7 414 aa18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 OLFML1Q6UWY5 402 aa18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 PDCD7Q8N8D1 485 aaKnown RBP18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 RBM15BQ8NDT2 890 aaKnown RBP18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 IL1RAPL1Q9NZN1 696 aa18.75■□□□□ 0.59
PTP4A3-202ENST00000349124 PAPSS1O43252 624 aaPredicted RBP18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 PSMG1O95456 288 aa18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 TMEM132DQ14C87 1099 aa18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 APOBEC3FQ8IUX4 373 aaKnown RBP18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 MAP7D3Q8IWC1 876 aa18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 ADGRF2Q8IZF7 708 aa18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.74■□□□□ 0.596e-6■■□□□ 12.4
PTP4A3-202ENST00000349124 FAM161BQ96MY7 647 aa18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 KLC2Q9H0B6 622 aa18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 DPP3Q9NY33 737 aa18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 EVPLQ92817 2033 aa18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 CAPN14A8MX76 684 aa18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 LYPLA1O75608 230 aaPredicted RBP18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 CNMDO75829 334 aa18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 C22orf31O95567 290 aa18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 OCRLQ01968 901 aa18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 UBAP2LQ14157 1087 aaKnown RBP18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 KRT72Q14CN4 511 aa18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 NAIF1Q69YI7 327 aaPredicted RBP18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 PPP1R13LQ8WUF5 828 aa18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 CEP41Q9BYV8 373 aa18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 STOML1Q9UBI4 398 aa18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 AKT3Q9Y243 479 aa18.74■□□□□ 0.59
PTP4A3-202ENST00000349124 E2F8A0AVK6 867 aa18.73■□□□□ 0.59
PTP4A3-202ENST00000349124 ENO4A6NNW6 628 aa18.73■□□□□ 0.59
PTP4A3-202ENST00000349124 I3L4J1 428 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms