RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 YWHAQP27348 245 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 HNRNPH3P31942 346 aaKnown RBP11.24□□□□□ -0.61
CLCN6-202ENST00000346436 MAPK9P45984 424 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 BCAT1P54687 386 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 NUDCD3Q8IVD9 361 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 WDR48Q8TAF3 677 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 UBA3Q8TBC4 463 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 FDXACB1Q9BRP7 624 aaPredicted RBP11.24□□□□□ -0.61
CLCN6-202ENST00000346436 TMEM121Q9BTD3 319 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 WDR18Q9BV38 432 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 ELOVL4Q9GZR5 314 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 CHST7Q9NS84 486 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 LMO7Q8WWI1 1683 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 CCDC78A2IDD5 438 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 ANXA9O76027 345 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 MTA2O94776 668 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 APOA4P06727 396 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 KCNA2P16389 499 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 KRT4P19013 534 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 FNTAP49354 379 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 RAP1GDS1P52306 607 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 FBXO47Q5MNV8 452 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 FAM46CQ5VWP2 391 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 SV2AQ7L0J3 742 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 ZNF677Q86XU0 584 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 C10orf88Q9H8K7 445 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 RAB6BQ9NRW1 208 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 ZMYND8Q9ULU4 1186 aaPredicted RBP11.24□□□□□ -0.61
CLCN6-202ENST00000346436 NFASCO94856 1347 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 SPATA31C1P0DKV0 1188 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 ITGALP20701 1170 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 FEZF2Q8TBJ5 459 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 DDIT4Q9NX09 232 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 L3MBTL1Q9Y468 752 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 CXCL14O95715 111 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 C4orf22Q6V702 233 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 PIP4K2CQ8TBX8 421 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 OSGEPL1Q9H4B0 414 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 PSMC3IPQ9P2W1 217 aaPredicted RBP11.24□□□□□ -0.61
CLCN6-202ENST00000346436 ITGA11Q9UKX5 1188 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 SUFUQ9UMX1 484 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 KIF1AQ12756 1690 aa11.24□□□□□ -0.61
CLCN6-202ENST00000346436 SUPT3HO75486 399 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 ATP5HO75947 161 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 BMP10O95393 424 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 DARSP14868 501 aaKnown RBP11.23□□□□□ -0.61
CLCN6-202ENST00000346436 RGS9BPQ6ZS82 235 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 SYDE1Q6ZW31 735 aaPredicted RBP11.23□□□□□ -0.61
CLCN6-202ENST00000346436 SERPINB12Q96P63 405 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 PURBQ96QR8 312 aaKnown RBP11.23□□□□□ -0.61
CLCN6-202ENST00000346436 CYP3A43Q9HB55 503 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 RAD18Q9NS91 495 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 PHTF1Q9UMS5 762 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 KDM3BQ7LBC6 1761 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 SYNDIG1LA6NDD5 238 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 UNCXA6NJT0 531 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 ARIH2O95376 493 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 GPD1P21695 349 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 CDC25CP30307 473 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 QPCTQ16769 361 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 ZNF662Q6ZS27 426 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 DACT3Q96B18 629 aaPredicted RBP11.23□□□□□ -0.61
CLCN6-202ENST00000346436 HES6Q96HZ4 224 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 SYT15Q9BQS2 421 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 USP18Q9UMW8 372 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 ARHGAP26Q9UNA1 814 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 PDZK1P1A8MUH7 402 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 ANKRD63C9JTQ0 380 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 PIAS1O75925 651 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 VDRP11473 427 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 NQO1P15559 274 aaKnown RBP11.23□□□□□ -0.61
CLCN6-202ENST00000346436 EPB42P16452 691 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 PPP3CCP48454 512 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 SESN2P58004 480 aaPredicted RBP11.23□□□□□ -0.61
CLCN6-202ENST00000346436 ART3Q13508 389 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 PTK6Q13882 451 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 SLC35G1Q2M3R5 365 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 ZRANB3Q5FWF4 1079 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 NOMO2Q5JPE7 1267 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 ACAD11Q709F0 780 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.23□□□□□ -0.61
CLCN6-202ENST00000346436 LRRC15Q8TF66 581 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 MAGEB10Q96LZ2 347 aaPredicted RBP11.23□□□□□ -0.61
CLCN6-202ENST00000346436 ZFP42Q96MM3 310 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 UPF3AQ9H1J1 476 aaKnown RBP11.23□□□□□ -0.61
CLCN6-202ENST00000346436 ERVK-5Q9HDB9 667 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 METTL5Q9NRN9 209 aaKnown RBP11.23□□□□□ -0.61
CLCN6-202ENST00000346436 GTPBP10A4D1E9 387 aaKnown RBP11.23□□□□□ -0.61
CLCN6-202ENST00000346436 ENO4A6NNW6 628 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 ZNF839A8K0R7 811 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 CSH1P0DML2 217 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 CSH2P0DML3 217 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 STMN1P16949 149 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 POLR2LP62875 67 aaKnown RBP11.23□□□□□ -0.61
CLCN6-202ENST00000346436 CUL2Q13617 745 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 CAPRIN2Q6IMN6 1127 aaKnown RBP11.23□□□□□ -0.61
CLCN6-202ENST00000346436 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.23□□□□□ -0.61
CLCN6-202ENST00000346436 C1orf186Q6ZWK4 172 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 NIPA1Q7RTP0 329 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 LINC00523Q86TU6 105 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms