RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 IFNAR2P48551 515 aa21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 COG7P83436 770 aa21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 SLC6A3Q01959 620 aa21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 CLEC16AQ2KHT3 1053 aa21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 TSR1Q2NL82 804 aaKnown RBP21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 TRIM67Q6ZTA4 783 aa21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 PIWIL1Q96J94 861 aaKnown RBP21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 WNT16Q9UBV4 365 aa21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 SFMBT1Q9UHJ3 866 aa21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 LSM7Q9UK45 103 aaKnown RBP21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 WNT6Q9Y6F9 365 aa21.77■■□□□ 1.08
SMARCB1-202ENST00000344921 SLC12A8A0AV02 714 aa21.76■■□□□ 1.07
SMARCB1-202ENST00000344921 UNGP13051 313 aaPredicted RBP21.76■■□□□ 1.07
SMARCB1-202ENST00000344921 GABRB2P47870 512 aa21.76■■□□□ 1.07
SMARCB1-202ENST00000344921 TAF5Q15542 800 aa21.76■■□□□ 1.07
SMARCB1-202ENST00000344921 TRIM68Q6AZZ1 485 aa21.76■■□□□ 1.07
SMARCB1-202ENST00000344921 MMS22LQ6ZRQ5 1243 aa21.76■■□□□ 1.07
SMARCB1-202ENST00000344921 ZNF571Q7Z3V5 609 aaPredicted RBP21.76■■□□□ 1.07
SMARCB1-202ENST00000344921 OSCP1Q8WVF1 389 aa21.76■■□□□ 1.07
SMARCB1-202ENST00000344921 DNASE1L2Q92874 299 aa21.76■■□□□ 1.07
SMARCB1-202ENST00000344921 EBF3Q9H4W6 596 aa21.76■■□□□ 1.07
SMARCB1-202ENST00000344921 NAALADL1Q9UQQ1 740 aa21.76■■□□□ 1.07
SMARCB1-202ENST00000344921 BZW2Q9Y6E2 419 aaKnown RBP21.76■■□□□ 1.07
SMARCB1-202ENST00000344921 ZNF75DP51815 510 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 RNASE9P60153 205 aaKnown RBP21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 TNK2Q07912 1038 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 FAM102AQ5T9C2 384 aaPredicted RBP21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 OLFML1Q6UWY5 402 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 TTC8Q8TAM2 541 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 ASIC4Q96FT7 647 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 C11orf70Q9BRQ4 267 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 HEBP1Q9NRV9 189 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 GTSE1Q9NYZ3 720 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 E2F8A0AVK6 867 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 GOLGA8SH3BPF8 625 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 SLC9A3R1O14745 358 aaPredicted RBP21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 HSF2BPO75031 334 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 SERPING1P05155 500 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 GLI1P08151 1106 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 MMP8P22894 467 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 CENPCQ03188 943 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 PDGFRLQ15198 375 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 SLC44A4Q53GD3 710 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 DCAF6Q58WW2 860 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 VPS36Q86VN1 386 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 XYLT1Q86Y38 959 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 SIX5Q8N196 739 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 FAM83CQ9BQN1 747 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 ADAM22Q9P0K1 906 aa21.75■■□□□ 1.07
SMARCB1-202ENST00000344921 TMCO5BA8MYB1 307 aa21.74■■□□□ 1.07
SMARCB1-202ENST00000344921 FYNP06241 537 aa21.74■■□□□ 1.07
SMARCB1-202ENST00000344921 KPNA1P52294 538 aaPredicted RBP21.74■■□□□ 1.07
SMARCB1-202ENST00000344921 SYPL2Q5VXT5 272 aa21.74■■□□□ 1.07
SMARCB1-202ENST00000344921 OR8K1Q8NGG5 319 aa21.74■■□□□ 1.07
SMARCB1-202ENST00000344921 MRFAP1L1Q96HT8 127 aa21.74■■□□□ 1.07
SMARCB1-202ENST00000344921 LINC00597Q9H2U6 94 aa21.74■■□□□ 1.07
SMARCB1-202ENST00000344921 MFSD1Q9H3U5 465 aa21.74■■□□□ 1.07
SMARCB1-202ENST00000344921 TRPV5Q9NQA5 729 aa21.74■■□□□ 1.07
SMARCB1-202ENST00000344921 ARHGEF3Q9NR81 526 aa21.74■■□□□ 1.07
SMARCB1-202ENST00000344921 ZNHIT6Q9NWK9 470 aaKnown RBP21.74■■□□□ 1.07
SMARCB1-202ENST00000344921 ASNSD1Q9NWL6 643 aa21.74■■□□□ 1.07
SMARCB1-202ENST00000344921 TBC1D14Q9P2M4 693 aa21.74■■□□□ 1.07
SMARCB1-202ENST00000344921 TICRRQ7Z2Z1 1910 aa21.74■■□□□ 1.07
SMARCB1-202ENST00000344921 STK25O00506 426 aa21.73■■□□□ 1.07
SMARCB1-202ENST00000344921 MSI1O43347 362 aaKnown RBP21.73■■□□□ 1.07
SMARCB1-202ENST00000344921 ARSAP15289 507 aa21.73■■□□□ 1.07
SMARCB1-202ENST00000344921 DEKP35659 375 aaKnown RBP21.73■■□□□ 1.07
SMARCB1-202ENST00000344921 ADKP55263 362 aaKnown RBP21.73■■□□□ 1.07
SMARCB1-202ENST00000344921 RUNX3Q13761 415 aa21.73■■□□□ 1.07
SMARCB1-202ENST00000344921 MSANTD2Q6P1R3 559 aa21.73■■□□□ 1.07
SMARCB1-202ENST00000344921 SLC26A9Q7LBE3 791 aa21.73■■□□□ 1.07
SMARCB1-202ENST00000344921 PHLDB2Q86SQ0 1253 aa21.73■■□□□ 1.07
SMARCB1-202ENST00000344921 DEFB106AQ8N104 65 aa21.73■■□□□ 1.07
SMARCB1-202ENST00000344921 ATP2A3Q93084 1043 aa21.73■■□□□ 1.07
SMARCB1-202ENST00000344921 WBP2Q969T9 261 aa21.73■■□□□ 1.07
SMARCB1-202ENST00000344921 SYT11Q9BT88 431 aa21.73■■□□□ 1.07
SMARCB1-202ENST00000344921 TMEM221A6NGB7 291 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 M0R296 226 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 ARNTLO00327 626 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 STC2O76061 302 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 CALB1P05937 261 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 ITPRIPL2Q3MIP1 535 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 HGSNATQ68CP4 663 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 ACAD10Q6JQN1 1059 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 BEND5Q7L4P6 421 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 ADAM32Q8TC27 787 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 DQX1Q8TE96 717 aaKnown RBP21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 HBS1LQ9Y450 684 aaKnown RBP21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 PLEKP08567 350 aaPredicted RBP21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 MLF2Q15773 248 aaPredicted RBP21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 EML3Q32P44 896 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 IER5LQ5T953 404 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 PPP1R2P3Q6NXS1 205 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 HTR3DQ70Z44 454 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 PHF13Q86YI8 300 aaPredicted RBP21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 CNGA4Q8IV77 575 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 BBS7Q8IWZ6 715 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 DRC7Q8IY82 874 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 CPA6Q8N4T0 437 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms