RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 EGFLAMQ63HQ2 1017 aa12.06□□□□□ -0.48
ATXN3-201ENST00000340660 MIER3Q7Z3K6 550 aa12.06□□□□□ -0.48
ATXN3-201ENST00000340660 ANKMY2Q8IV38 441 aa12.06□□□□□ -0.48
ATXN3-201ENST00000340660 ZNF417Q8TAU3 575 aa12.06□□□□□ -0.48
ATXN3-201ENST00000340660 ASAP3Q8TDY4 903 aa12.06□□□□□ -0.48
ATXN3-201ENST00000340660 PANK1Q8TE04 598 aa12.06□□□□□ -0.48
ATXN3-201ENST00000340660 TCP11Q8WWU5 503 aa12.06□□□□□ -0.48
ATXN3-201ENST00000340660 CEP170P1Q96L14 293 aa12.06□□□□□ -0.48
ATXN3-201ENST00000340660 ZNF587Q96SQ5 575 aaPredicted RBP12.06□□□□□ -0.48
ATXN3-201ENST00000340660 SEPT5Q99719 369 aaPredicted RBP12.06□□□□□ -0.48
ATXN3-201ENST00000340660 OSGEPQ9NPF4 335 aa12.06□□□□□ -0.48
ATXN3-201ENST00000340660 ITGB1BP2Q9UKP3 347 aa12.06□□□□□ -0.48
ATXN3-201ENST00000340660 TIMM13Q9Y5L4 95 aaPredicted RBP12.06□□□□□ -0.48
ATXN3-201ENST00000340660 UBE4BO95155 1302 aa12.06□□□□□ -0.48
ATXN3-201ENST00000340660 SMIM28A0A1B0GU29 152 aa12.05□□□□□ -0.48
ATXN3-201ENST00000340660 TBC1D3BA6NDS4 549 aa12.05□□□□□ -0.48
ATXN3-201ENST00000340660 GAS7O60861 476 aa12.05□□□□□ -0.48
ATXN3-201ENST00000340660 SPATA31C1P0DKV0 1188 aa12.05□□□□□ -0.48
ATXN3-201ENST00000340660 ATP2B1P20020 1258 aa12.05□□□□□ -0.48
ATXN3-201ENST00000340660 ADCY7P51828 1080 aa12.05□□□□□ -0.48
ATXN3-201ENST00000340660 YWHAHQ04917 246 aaPredicted RBP12.05□□□□□ -0.48
ATXN3-201ENST00000340660 POU5F1BQ06416 359 aa12.05□□□□□ -0.48
ATXN3-201ENST00000340660 DHCR24Q15392 516 aa12.05□□□□□ -0.48
ATXN3-201ENST00000340660 TGIF1Q15583 401 aa12.05□□□□□ -0.48
ATXN3-201ENST00000340660 HIF1AQ16665 826 aa12.05□□□□□ -0.48
ATXN3-201ENST00000340660 JAKMIP3Q5VZ66 844 aa12.05□□□□□ -0.48
ATXN3-201ENST00000340660 C8orf86Q6ZUL3 223 aa12.05□□□□□ -0.48
ATXN3-201ENST00000340660 CLEC14AQ86T13 490 aa12.05□□□□□ -0.48
ATXN3-201ENST00000340660 RDM1Q8NG50 284 aa12.05□□□□□ -0.48
ATXN3-201ENST00000340660 LRRC15Q8TF66 581 aa12.05□□□□□ -0.48
ATXN3-201ENST00000340660 MRPS31Q92665 395 aaKnown RBP12.05□□□□□ -0.48
ATXN3-201ENST00000340660 ELF4Q99607 663 aaPredicted RBP12.05□□□□□ -0.48
ATXN3-201ENST00000340660 GABRG3Q99928 467 aa12.05□□□□□ -0.48
ATXN3-201ENST00000340660 LZTS2Q9BRK4 669 aa12.05□□□□□ -0.48
ATXN3-201ENST00000340660 XPNPEP1Q9NQW7 623 aa12.05□□□□□ -0.48
ATXN3-201ENST00000340660 ITM2CQ9NQX7 267 aa12.05□□□□□ -0.48
ATXN3-201ENST00000340660 ARID1BQ8NFD5 2236 aaPredicted RBP12.05□□□□□ -0.48
ATXN3-201ENST00000340660 WT1P19544 449 aaPredicted RBP12.04□□□□□ -0.48
ATXN3-201ENST00000340660 MCM4P33991 863 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 TPMTP51580 245 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 MLLT10P55197 1068 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 RPL10AP62906 217 aaKnown RBP12.04□□□□□ -0.48
ATXN3-201ENST00000340660 ZXDBP98169 803 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 TESK1Q15569 626 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 TAF12Q16514 161 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 RTN1Q16799 776 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 LRCH2Q5VUJ6 765 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 B3GNT9Q6UX72 402 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 RSRC2Q7L4I2 434 aaKnown RBP12.04□□□□□ -0.48
ATXN3-201ENST00000340660 ADGRG2Q8IZP9 1017 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 STKLD1Q8NE28 680 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 CTCFLQ8NI51 663 aaPredicted RBP12.04□□□□□ -0.48
ATXN3-201ENST00000340660 SLC5A5Q92911 643 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 MAP3K14Q99558 947 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 RIT2Q99578 217 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 NFKBIZQ9BYH8 718 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 TMEM206Q9H813 350 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 VRTNQ9H8Y1 702 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 TRPC7Q9HCX4 862 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 HSFX1Q9UBD0 423 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 TJP2Q9UDY2 1190 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 TACC2O95359 2948 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 ATRQ13535 2644 aa12.04□□□□□ -0.48
ATXN3-201ENST00000340660 ADAMTS3O15072 1205 aa12.03□□□□□ -0.48
ATXN3-201ENST00000340660 OPA1O60313 960 aa12.03□□□□□ -0.48
ATXN3-201ENST00000340660 CKMP06732 381 aa12.03□□□□□ -0.48
ATXN3-201ENST00000340660 USP17L7P0C7H9 530 aa12.03□□□□□ -0.48
ATXN3-201ENST00000340660 TCF3P15923 654 aa12.03□□□□□ -0.48
ATXN3-201ENST00000340660 EPHA8P29322 1005 aaPredicted RBP12.03□□□□□ -0.48
ATXN3-201ENST00000340660 NAPAP54920 295 aa12.03□□□□□ -0.48
ATXN3-201ENST00000340660 GRIN1Q05586 938 aa12.03□□□□□ -0.48
ATXN3-201ENST00000340660 TFDP1Q14186 410 aa12.03□□□□□ -0.48
ATXN3-201ENST00000340660 MXD4Q14582 209 aaPredicted RBP12.03□□□□□ -0.48
ATXN3-201ENST00000340660 NAA30Q147X3 362 aaPredicted RBP12.03□□□□□ -0.48
ATXN3-201ENST00000340660 MGAT5BQ3V5L5 792 aa12.03□□□□□ -0.48
ATXN3-201ENST00000340660 C10orf76Q5T2E6 689 aa12.03□□□□□ -0.48
ATXN3-201ENST00000340660 SFMBT2Q5VUG0 894 aa12.03□□□□□ -0.48
ATXN3-201ENST00000340660 RHBDF2Q6PJF5 856 aa12.03□□□□□ -0.48
ATXN3-201ENST00000340660 C20orf204Q6ZNR8 217 aa12.03□□□□□ -0.48
ATXN3-201ENST00000340660 FILIP1Q7Z7B0 1213 aa12.03□□□□□ -0.48
ATXN3-201ENST00000340660 TEX2Q8IWB9 1127 aa12.03□□□□□ -0.48
ATXN3-201ENST00000340660 EXOC8Q8IYI6 725 aa12.03□□□□□ -0.48
ATXN3-201ENST00000340660 CCDC82Q8N4S0 544 aa12.03□□□□□ -0.48
ATXN3-201ENST00000340660 BHMTQ93088 406 aa12.03□□□□□ -0.48
ATXN3-201ENST00000340660 TEKT3Q9BXF9 490 aa12.03□□□□□ -0.48
ATXN3-201ENST00000340660 UNKQ9C0B0 810 aaKnown RBP12.03□□□□□ -0.48
ATXN3-201ENST00000340660 C6orf106Q9H6K1 298 aaPredicted RBP12.03□□□□□ -0.48
ATXN3-201ENST00000340660 ZNF71Q9NQZ8 489 aaPredicted RBP12.03□□□□□ -0.48
ATXN3-201ENST00000340660 ZBTB40Q9NUA8 1239 aa12.03□□□□□ -0.48
ATXN3-201ENST00000340660 WRAP73Q9P2S5 460 aaPredicted RBP12.03□□□□□ -0.48
ATXN3-201ENST00000340660 USP20Q9Y2K6 914 aa12.03□□□□□ -0.48
ATXN3-201ENST00000340660 FN1P02751 2386 aaKnown RBP12.03□□□□□ -0.48
ATXN3-201ENST00000340660 TP53BP1Q12888 1972 aaPredicted RBP12.02□□□□□ -0.49
ATXN3-201ENST00000340660 TRIP11Q15643 1979 aa12.02□□□□□ -0.49
ATXN3-201ENST00000340660 OR6C75A6NL08 312 aa12.02□□□□□ -0.49
ATXN3-201ENST00000340660 CYP26A1O43174 497 aa12.02□□□□□ -0.49
ATXN3-201ENST00000340660 SYNCRIPO60506 623 aaKnown RBP12.02□□□□□ -0.49
ATXN3-201ENST00000340660 PSMD10O75832 226 aa12.02□□□□□ -0.49
ATXN3-201ENST00000340660 CIITAP33076 1130 aa12.02□□□□□ -0.49
ATXN3-201ENST00000340660 POLE2P56282 527 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms