RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 BEST2Q8NFU1 509 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 DDX1Q92499 740 aaKnown RBP13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 FAXDC2Q96IV6 333 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 CLPTM1LQ96KA5 538 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 DOCK2Q92608 1830 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 RNF103-CHMP3A0A140T963 221 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 USP1O94782 785 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 HMGCRP04035 888 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 CXCL8P10145 99 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 USP10Q14694 798 aaKnown RBP13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 ITPRIPL1Q6GPH6 555 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 FAM83AQ86UY5 434 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 AMIGO3Q86WK7 504 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 CHSY1Q86X52 802 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 CCT7Q99832 543 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 MRPL1Q9BYD6 325 aaKnown RBP13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 ETNK2Q9NVF9 386 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 WASF2Q9Y6W5 498 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 F8W8V4 182 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 MAGEC1O60732 1142 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 TM7SF2O76062 418 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 SERPINA6P08185 405 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 PDK1Q15118 436 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 TRIM67Q6ZTA4 783 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 RELL1Q8IUW5 271 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 VPS39Q96JC1 886 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 PRMT7Q9NVM4 692 aaPredicted RBP13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 COL14A1Q05707 1796 aaKnown RBP13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 NAV1Q8NEY1 1877 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 BCORQ6W2J9 1755 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 VWA5AO00534 786 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 LRCH4O75427 683 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 MICAL2O94851 1124 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 CYP2F1P24903 491 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 MAPRE2Q15555 327 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 KIF19Q2TAC6 998 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 LRRC8EQ6NSJ5 796 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 CHADLQ6NUI6 762 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 GSTCDQ8NEC7 633 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 APOBEC3GQ9HC16 384 aaKnown RBP13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 ARHGAP28Q9P2N2 729 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 FETUBQ9UGM5 382 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 CDYLQ9Y232 598 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 PLLPQ9Y342 182 aa13.16□□□□□ -0.3
DNMT3A-202ENST00000321117 C10orf71Q711Q0 1435 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 FAM155BO75949 473 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 EEF1B2P24534 225 aaKnown RBP13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 SULT1E1P49888 294 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 TGFB2P61812 414 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 MOGSQ13724 837 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 C15orf59Q2T9L4 293 aaPredicted RBP13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 PTPN20Q4JDL3 420 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 C1orf220Q5T0J3 134 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 GCNAQ96QF7 691 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 SLC39A10Q9ULF5 831 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 GAS2O43903 313 aaKnown RBP13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 TRUB2O95900 331 aaKnown RBP13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 LYNP07948 512 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 CFHP08603 1231 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 TNFSF9P41273 254 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 MGAT5Q09328 741 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 ANGEL2Q5VTE6 544 aaKnown RBP13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 DPY19L2P1Q6NXN4 242 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 ARCQ7LC44 396 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 FAM49AQ9H0Q0 323 aaPredicted RBP13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 DMAP1Q9NPF5 467 aaPredicted RBP13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 IPO11Q9UI26 975 aaKnown RBP13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 KIAA1257Q9ULG3 409 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 SSX2IPQ9Y2D8 614 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 WDR27A2RRH5 827 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 TCF4P15884 667 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 HSPA13P48723 471 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 PRAMEP78395 509 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 WASHC5Q12768 1159 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 KLF1Q13351 362 aaPredicted RBP13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 EFCAB12Q6NXP0 572 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 RAB44Q7Z6P3 723 aaPredicted RBP13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 MPP4Q96JB8 637 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 TBCBQ99426 244 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 CYP3A43Q9HB55 503 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 TCF7L2Q9NQB0 619 aa13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 PIH1D1Q9NWS0 290 aaKnown RBP13.15□□□□□ -0.3
DNMT3A-202ENST00000321117 SERPINB8P50452 374 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 GDF10P55107 478 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 KYAT1Q16773 422 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 DDI1Q8WTU0 396 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 ZNF516Q92618 1163 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 GFM2Q969S9 779 aaKnown RBP13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 SERAC1Q96JX3 654 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 RNF157Q96PX1 679 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 NTPCRQ9BSD7 190 aaKnown RBP13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 AP4E1Q9UPM8 1137 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 TAF1P21675 1872 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 C19orf81C9J6K1 198 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 XPO1O14980 1071 aaKnown RBP13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 STRNO43815 780 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 HUS1O60921 280 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 PDGFRBP09619 1106 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 PHEXP78562 749 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 LAMTOR4Q0VGL1 99 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms