RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 TMC2Q8TDI7 906 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 TP63Q9H3D4 680 aaPredicted RBP6.88□□□□□ -1.31
ZNF540-201ENST00000316433 MMRN2Q9H8L6 949 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 S100A14Q9HCY8 104 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 CD209Q9NNX6 404 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 SLCO1B3Q9NPD5 702 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 TCF7L2Q9NQB0 619 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 APEX2Q9UBZ4 518 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 VANGL2Q9ULK5 521 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 ILVBLA1L0T0 632 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 WDR91A4D1P6 747 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 MEIS2O14770 477 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 TGFB1I1O43294 461 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 UGT1A9O60656 530 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 GMNNO75496 209 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 NR3C1P04150 777 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 INHBBP09529 407 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 CCDC130P13994 396 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 UGT1A6P19224 532 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 UGT1A1P22309 533 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 UGT1A4P22310 534 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 SHMT1P34896 483 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 PTGS2P35354 604 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 UGT1A3P35503 534 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 UGT1A5P35504 534 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 POLD2P49005 469 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 CREB5Q02930 508 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 SNAPC2Q13487 334 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 LETM2Q2VYF4 491 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 ANO4Q32M45 955 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 TMC5Q6UXY8 1006 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 PSPC1Q8WXF1 523 aaKnown RBP6.88□□□□□ -1.31
ZNF540-201ENST00000316433 HERVK_113Q902F9 699 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 STAMQ92783 540 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 THAP11Q96EK4 314 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 PIGSQ96S52 555 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 RIT2Q99578 217 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 SENP7Q9BQF6 1050 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 UGT1A7Q9HAW7 530 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 UGT1A10Q9HAW8 530 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 UGT1A8Q9HAW9 530 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 SCPEP1Q9HB40 452 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 FAM207AQ9NSI2 230 aaPredicted RBP6.88□□□□□ -1.31
ZNF540-201ENST00000316433 APPL1Q9UKG1 709 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 POLIQ9UNA4 740 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 B3GNT3Q9Y2A9 372 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 FER1L6Q2WGJ9 1857 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 H3BUI4 141 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 CCRL2O00421 344 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 EML1O00423 815 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 TP73O15350 636 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 MYO1DO94832 1006 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 ZNF23P17027 643 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 TNNI2P48788 182 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 MLLT6P55198 1093 aaPredicted RBP6.87□□□□□ -1.31
ZNF540-201ENST00000316433 MAP3K7CLP57077 242 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 YWHAGP61981 247 aaKnown RBP eCLIP6.87□□□□□ -1.31
ZNF540-201ENST00000316433 CTTNQ14247 550 aaKnown RBP6.87□□□□□ -1.31
ZNF540-201ENST00000316433 HP1BP3Q5SSJ5 553 aaPredicted RBP6.87□□□□□ -1.31
ZNF540-201ENST00000316433 LRRC38Q5VT99 294 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 C1orf146Q5VVC0 180 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 ANKS1BQ7Z6G8 1248 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 GLRX5Q86SX6 157 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 DCP2Q8IU60 420 aaKnown RBP6.87□□□□□ -1.31
ZNF540-201ENST00000316433 GALNT13Q8IUC8 556 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 GPIHBP1Q8IV16 184 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 SP8Q8IXZ3 490 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 FAM71AQ8IYT1 594 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 UBL4BQ8N7F7 174 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 ADAMTS16Q8TE57 1224 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 GRK7Q8WTQ7 553 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 SPOCK2Q92563 424 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 CDKL2Q92772 493 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 DDX17Q92841 729 aaKnown RBP6.87□□□□□ -1.31
ZNF540-201ENST00000316433 PMEPA1Q969W9 287 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 ZNF486Q96H40 463 aaPredicted RBP6.87□□□□□ -1.31
ZNF540-201ENST00000316433 WNK4Q96J92 1243 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 UROC1Q96N76 676 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 ZNF641Q96N77 438 aaPredicted RBP6.87□□□□□ -1.31
ZNF540-201ENST00000316433 GCNAQ96QF7 691 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 ANO3Q9BYT9 981 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 SERHL2Q9H4I8 314 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 TMEM206Q9H813 350 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 PCDH12Q9NPG4 1184 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 ANKMY1Q9P2S6 941 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 TBK1Q9UHD2 729 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 IP6K2Q9UHH9 426 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 NOCTQ9UK39 431 aaKnown RBP6.87□□□□□ -1.31
ZNF540-201ENST00000316433 APOBEC2Q9Y235 224 aaKnown RBP6.87□□□□□ -1.31
ZNF540-201ENST00000316433 RALGAPA2Q2PPJ7 1873 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 FADS2P1A8MWK0 482 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 FOXO6A8MYZ6 492 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 POTECB2RU33 542 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 CFAP99D6REC4 459 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 ATMINO43313 823 aaPredicted RBP6.87□□□□□ -1.31
ZNF540-201ENST00000316433 PEX1O43933 1283 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 PSMD10O75832 226 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 CBX5P45973 191 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 FMO5P49326 533 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 TPTEP56180 551 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms