RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 TMEM30AQ9NV96 361 aa15.34■□□□□ 0.05
CLK4-201ENST00000316308 MBLAC1A4D2B0 266 aaPredicted RBP15.33■□□□□ 0.05
CLK4-201ENST00000316308 C2orf71A6NGG8 1288 aa15.33■□□□□ 0.05
CLK4-201ENST00000316308 IGF2BP3O00425 579 aaKnown RBP eCLIP15.33■□□□□ 0.05
CLK4-201ENST00000316308 ZNF865P0CJ78 1059 aaPredicted RBP15.33■□□□□ 0.05
CLK4-201ENST00000316308 STIP1P31948 543 aaKnown RBP15.33■□□□□ 0.05
CLK4-201ENST00000316308 BNIP1Q12981 228 aa15.33■□□□□ 0.05
CLK4-201ENST00000316308 PTK7Q13308 1070 aa15.33■□□□□ 0.05
CLK4-201ENST00000316308 BOLA3Q53S33 107 aa15.33■□□□□ 0.05
CLK4-201ENST00000316308 OTUD1Q5VV17 481 aaPredicted RBP15.33■□□□□ 0.05
CLK4-201ENST00000316308 IQSEC1Q6DN90 963 aa15.33■□□□□ 0.05
CLK4-201ENST00000316308 BANPQ8N9N5 519 aa15.33■□□□□ 0.05
CLK4-201ENST00000316308 ZNF75CPQ92670 426 aaPredicted RBP15.33■□□□□ 0.05
CLK4-201ENST00000316308 TMEM237Q96Q45 408 aa15.33■□□□□ 0.05
CLK4-201ENST00000316308 AP4E1Q9UPM8 1137 aa15.33■□□□□ 0.05
CLK4-201ENST00000316308 IPPQ9Y573 584 aa15.33■□□□□ 0.05
CLK4-201ENST00000316308 MRPL42Q9Y6G3 142 aaKnown RBP15.33■□□□□ 0.05
CLK4-201ENST00000316308 DPYSL4O14531 572 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 KRT16P08779 473 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 VAV1P15498 845 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 ADIGQ0VDE8 80 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 TFDP2Q14188 446 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 PDK4Q16654 411 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 FAM110CQ1W6H9 321 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 SYPL2Q5VXT5 272 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 ICE2Q659A1 982 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 KCNT2Q6UVM3 1135 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 PAQR9Q6ZVX9 377 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 PIGZQ86VD9 579 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 LRRC6Q86X45 466 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 PPM1NQ8N819 430 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 WNT8BQ93098 351 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 FAM149B1Q96BN6 582 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 PLEKHA5Q9HAU0 1116 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 ANLNQ9NQW6 1124 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 IL1RAPL1Q9NZN1 696 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 KIAA1257Q9ULG3 409 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 TTLL3Q9Y4R7 772 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 NRCAMQ92823 1304 aa15.33■□□□□ 0.04
CLK4-201ENST00000316308 I6L893 689 aaPredicted RBP15.32■□□□□ 0.04
CLK4-201ENST00000316308 PTGESO14684 152 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 EDF1O60869 148 aaKnown RBP15.32■□□□□ 0.04
CLK4-201ENST00000316308 PYGBP11216 843 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 HHATQ5VTY9 493 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 SH2D5Q6ZV89 423 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 NT5DC4Q86YG4 428 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 CTAGE3PQ8IX95 158 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 DEFB106AQ8N104 65 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 ANKRD52Q8NB46 1076 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 LPPQ93052 612 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 CSPG4P5Q96PW8 444 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 PAAF1Q9BRP4 392 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 POPDC2Q9HBU9 364 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 KANSL3Q9P2N6 904 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 DCTN4Q9UJW0 460 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 PHBP35232 272 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 GMPRP36959 345 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 CACNA2D1P54289 1103 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 LILRA4P59901 499 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 E2F5Q15329 346 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 KYAT1Q16773 422 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 CES4AQ5XG92 561 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 WSCD1Q658N2 575 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 RFWD2Q8NHY2 731 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 ERP27Q96DN0 273 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 PRR11Q96HE9 360 aaPredicted RBP15.32■□□□□ 0.04
CLK4-201ENST00000316308 FAM111AQ96PZ2 611 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 MECRQ9BV79 373 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 RHOBTB2Q9BYZ6 727 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 ZNF395Q9H8N7 513 aaPredicted RBP15.32■□□□□ 0.04
CLK4-201ENST00000316308 NPHS2Q9NP85 383 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 DTLQ9NZJ0 730 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 KLHL14Q9P2G3 628 aa15.32■□□□□ 0.04
CLK4-201ENST00000316308 SMIM35A0A1B0GVV1 85 aa15.31■□□□□ 0.04
CLK4-201ENST00000316308 RARBP10826 455 aa15.31■□□□□ 0.04
CLK4-201ENST00000316308 BST2Q10589 180 aaKnown RBP15.31■□□□□ 0.04
CLK4-201ENST00000316308 PDK2Q15119 407 aa15.31■□□□□ 0.04
CLK4-201ENST00000316308 FAM47CQ5HY64 1035 aa15.31■□□□□ 0.04
CLK4-201ENST00000316308 NCBP2-AS2Q69YL0 99 aa15.31■□□□□ 0.04
CLK4-201ENST00000316308 CEP128Q6ZU80 1094 aa15.31■□□□□ 0.04
CLK4-201ENST00000316308 MAP7D3Q8IWC1 876 aa15.31■□□□□ 0.04
CLK4-201ENST00000316308 SUGP1Q8IWZ8 645 aaKnown RBP15.31■□□□□ 0.04
CLK4-201ENST00000316308 LRRC52Q8N7C0 313 aa15.31■□□□□ 0.04
CLK4-201ENST00000316308 LRRC8CQ8TDW0 803 aa15.31■□□□□ 0.04
CLK4-201ENST00000316308 TBC1D31Q96DN5 1066 aa15.31■□□□□ 0.04
CLK4-201ENST00000316308 FRMD8P1Q9BZ68 369 aaPredicted RBP15.31■□□□□ 0.04
CLK4-201ENST00000316308 RXFP1Q9HBX9 757 aa15.31■□□□□ 0.04
CLK4-201ENST00000316308 UBQLN1Q9UMX0 589 aaKnown RBP15.31■□□□□ 0.04
CLK4-201ENST00000316308 STK38LQ9Y2H1 464 aa15.31■□□□□ 0.04
CLK4-201ENST00000316308 RRN3P2A6NIE6 340 aa15.31■□□□□ 0.04
CLK4-201ENST00000316308 SLC15A5A6NIM6 579 aa15.31■□□□□ 0.04
CLK4-201ENST00000316308 MDM4O15151 490 aa15.31■□□□□ 0.04
CLK4-201ENST00000316308 MGRN1O60291 552 aa15.31■□□□□ 0.04
CLK4-201ENST00000316308 CSH1P0DML2 217 aa15.31■□□□□ 0.04
CLK4-201ENST00000316308 CSH2P0DML3 217 aa15.31■□□□□ 0.04
CLK4-201ENST00000316308 TARSP26639 723 aaKnown RBP15.31■□□□□ 0.04
CLK4-201ENST00000316308 NR1H3Q13133 447 aa15.31■□□□□ 0.04
CLK4-201ENST00000316308 DPYSL2Q16555 572 aa15.31■□□□□ 0.04
CLK4-201ENST00000316308 DCAF6Q58WW2 860 aa15.31■□□□□ 0.04
CLK4-201ENST00000316308 ARHGAP17Q68EM7 881 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms