RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 SMARCD1Q96GM5 515 aa20.19■□□□□ 0.82
HOXC4-201ENST00000303406 PCED1BQ96HM7 432 aa20.19■□□□□ 0.82
HOXC4-201ENST00000303406 GLT1D1Q96MS3 346 aa20.19■□□□□ 0.82
HOXC4-201ENST00000303406 KCTD15Q96SI1 283 aaPredicted RBP20.19■□□□□ 0.82
HOXC4-201ENST00000303406 SMOQ99835 787 aa20.19■□□□□ 0.82
HOXC4-201ENST00000303406 OSBPL7Q9BZF2 842 aa20.19■□□□□ 0.82
HOXC4-201ENST00000303406 DHX35Q9H5Z1 703 aaKnown RBP20.19■□□□□ 0.82
HOXC4-201ENST00000303406 CCDC134Q9H6E4 229 aa20.19■□□□□ 0.82
HOXC4-201ENST00000303406 CSNK1G1Q9HCP0 422 aa20.19■□□□□ 0.82
HOXC4-201ENST00000303406 TRMT13Q9NUP7 481 aaKnown RBP20.19■□□□□ 0.82
HOXC4-201ENST00000303406 TDRD15B5MCY1 1934 aaKnown RBP20.19■□□□□ 0.82
HOXC4-201ENST00000303406 BEST1O76090 585 aa20.18■□□□□ 0.82
HOXC4-201ENST00000303406 EOMESO95936 686 aa20.18■□□□□ 0.82
HOXC4-201ENST00000303406 FAM107AO95990 144 aa20.18■□□□□ 0.82
HOXC4-201ENST00000303406 TYMPP19971 482 aa20.18■□□□□ 0.82
HOXC4-201ENST00000303406 IGFBP6P24592 240 aaPredicted RBP20.18■□□□□ 0.82
HOXC4-201ENST00000303406 SLCO1A2P46721 670 aa20.18■□□□□ 0.82
HOXC4-201ENST00000303406 TKTL1P51854 596 aa20.18■□□□□ 0.82
HOXC4-201ENST00000303406 MAP3K7CLP57077 242 aa20.18■□□□□ 0.82
HOXC4-201ENST00000303406 RNASELQ05823 741 aaKnown RBP20.18■□□□□ 0.82
HOXC4-201ENST00000303406 SKIDA1Q1XH10 827 aa20.18■□□□□ 0.82
HOXC4-201ENST00000303406 OTUD1Q5VV17 481 aaPredicted RBP20.18■□□□□ 0.82
HOXC4-201ENST00000303406 C1orf228Q6PIY5 440 aa20.18■□□□□ 0.82
HOXC4-201ENST00000303406 DCLRE1AQ6PJP8 1040 aa20.18■□□□□ 0.82
HOXC4-201ENST00000303406 CD300LGQ6UXG3 332 aa20.18■□□□□ 0.82
HOXC4-201ENST00000303406 EXOC3L1Q86VI1 746 aa20.18■□□□□ 0.82
HOXC4-201ENST00000303406 NLRP14Q86W24 1093 aa20.18■□□□□ 0.82
HOXC4-201ENST00000303406 SPATS2Q86XZ4 545 aaKnown RBP20.18■□□□□ 0.82
HOXC4-201ENST00000303406 IRGQQ8WZA9 623 aa20.18■□□□□ 0.82
HOXC4-201ENST00000303406 ARHGEF2Q92974 986 aaKnown RBP20.18■□□□□ 0.82
HOXC4-201ENST00000303406 NTAN1Q96AB6 310 aa20.18■□□□□ 0.82
HOXC4-201ENST00000303406 FAM149B1Q96BN6 582 aa20.18■□□□□ 0.82
HOXC4-201ENST00000303406 PGAP3Q96FM1 320 aaPredicted RBP20.18■□□□□ 0.82
HOXC4-201ENST00000303406 CSPG4P5Q96PW8 444 aa20.18■□□□□ 0.82
HOXC4-201ENST00000303406 SEZ6LQ9BYH1 1024 aa20.18■□□□□ 0.82
HOXC4-201ENST00000303406 RGS18Q9NS28 235 aa20.18■□□□□ 0.82
HOXC4-201ENST00000303406 USP3Q9Y6I4 520 aa20.18■□□□□ 0.82
HOXC4-201ENST00000303406 FRMPD3Q5JV73 1810 aa20.18■□□□□ 0.82
HOXC4-201ENST00000303406 MYBPHLA2RUH7 354 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 GMNCA6NCL1 334 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 HACD1B0YJ81 288 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 NDUFAB1O14561 156 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 ZBED1O96006 694 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 PHBP35232 272 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 ARL4AP40617 200 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 PDIA2Q13087 525 aaKnown RBP20.17■□□□□ 0.82
HOXC4-201ENST00000303406 KCNJ11Q14654 390 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 MAPRE1Q15691 268 aaKnown RBP20.17■□□□□ 0.82
HOXC4-201ENST00000303406 INTS6LQ5JSJ4 861 aaKnown RBP20.17■□□□□ 0.82
HOXC4-201ENST00000303406 ZC3H18Q86VM9 953 aaKnown RBP20.17■□□□□ 0.82
HOXC4-201ENST00000303406 CCDC185Q8N715 623 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 ATP11CQ8NB49 1132 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 ZMIZ2Q8NF64 920 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 XPO6Q96QU8 1125 aaKnown RBP20.17■□□□□ 0.82
HOXC4-201ENST00000303406 RTP3Q9BQQ7 232 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 C10orf88Q9H8K7 445 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 PNPLA8Q9NP80 782 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 SLC24A2Q9UI40 661 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 HHLA1C9JL84 531 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 MYCNP04198 464 aaPredicted RBP20.17■□□□□ 0.82
HOXC4-201ENST00000303406 CHN1P15882 459 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 DCAF6Q58WW2 860 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 PPP6R3Q5H9R7 873 aaPredicted RBP20.17■□□□□ 0.82
HOXC4-201ENST00000303406 ANKRD22Q5VYY1 191 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 TRAF7Q6Q0C0 670 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 ZBED8Q8IZ13 594 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 PDIK1LQ8N165 341 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 CD99L2Q8TCZ2 262 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 RAET1EQ8TD07 263 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 SUSD3Q96L08 255 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 QKIQ96PU8 341 aaKnown RBP eCLIP20.17■□□□□ 0.82
HOXC4-201ENST00000303406 PKMYT1Q99640 499 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 SELENOSQ9BQE4 189 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 ULBP1Q9BZM6 244 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 CACNG4Q9UBN1 327 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 XPO7Q9UIA9 1087 aaKnown RBP20.17■□□□□ 0.82
HOXC4-201ENST00000303406 GGA2Q9UJY4 613 aa20.17■□□□□ 0.82
HOXC4-201ENST00000303406 H3BRJ5 948 aa20.16■□□□□ 0.82
HOXC4-201ENST00000303406 B3GAT3O94766 335 aa20.16■□□□□ 0.82
HOXC4-201ENST00000303406 TMEM63AO94886 807 aa20.16■□□□□ 0.82
HOXC4-201ENST00000303406 CKBP12277 381 aa20.16■□□□□ 0.82
HOXC4-201ENST00000303406 ZNF135P52742 658 aaPredicted RBP20.16■□□□□ 0.82
HOXC4-201ENST00000303406 ATXN1P54253 815 aaKnown RBP20.16■□□□□ 0.82
HOXC4-201ENST00000303406 SCAPQ12770 1279 aa20.16■□□□□ 0.82
HOXC4-201ENST00000303406 SLC45A4Q5BKX6 768 aa20.16■□□□□ 0.82
HOXC4-201ENST00000303406 B4GALNT4Q76KP1 1039 aa20.16■□□□□ 0.82
HOXC4-201ENST00000303406 BEND5Q7L4P6 421 aa20.16■□□□□ 0.82
HOXC4-201ENST00000303406 TADA2BQ86TJ2 420 aa20.16■□□□□ 0.82
HOXC4-201ENST00000303406 ATXN2LQ8WWM7 1075 aaKnown RBP20.16■□□□□ 0.82
HOXC4-201ENST00000303406 RSPH1Q8WYR4 309 aa20.16■□□□□ 0.82
HOXC4-201ENST00000303406 MYLPFQ96A32 169 aa20.16■□□□□ 0.82
HOXC4-201ENST00000303406 CCT8L2Q96SF2 557 aa20.16■□□□□ 0.82
HOXC4-201ENST00000303406 PAAF1Q9BRP4 392 aa20.16■□□□□ 0.82
HOXC4-201ENST00000303406 TRIM62Q9BVG3 475 aa20.16■□□□□ 0.82
HOXC4-201ENST00000303406 EXOC1LA0A1B0GW35 172 aa20.15■□□□□ 0.82
HOXC4-201ENST00000303406 C5orf60A6NFR6 353 aa20.15■□□□□ 0.82
HOXC4-201ENST00000303406 TMEM189-UBE2V1I3L0A0 370 aa20.15■□□□□ 0.82
HOXC4-201ENST00000303406 EBAG9O00559 213 aa20.15■□□□□ 0.82
HOXC4-201ENST00000303406 KCNN4O15554 427 aa20.15■□□□□ 0.82
HOXC4-201ENST00000303406 GCATO75600 419 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms