RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 MAN1C1Q9NR34 630 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 PIN4Q9Y237 131 aaKnown RBP14.54□□□□□ -0.08
SDC2-201ENST00000302190 LRCH4O75427 683 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 SULT1E1P49888 294 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 BST1Q10588 318 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 FSTL1Q12841 308 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 IZUMO2Q6UXV1 221 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 RDM1Q8NG50 284 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 SCG3Q8WXD2 468 aaKnown RBP14.54□□□□□ -0.08
SDC2-201ENST00000302190 CDCA5Q96FF9 252 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 FGD4Q96M96 766 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 EPB41L4BQ9H329 900 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 BFARQ9NZS9 450 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 HUS1O60921 280 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 ACAT1P24752 427 aaKnown RBP14.54□□□□□ -0.08
SDC2-201ENST00000302190 AP3M2P53677 418 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 ROR2Q01974 943 aaKnown RBP14.54□□□□□ -0.08
SDC2-201ENST00000302190 FASTKD1Q53R41 847 aaKnown RBP14.54□□□□□ -0.08
SDC2-201ENST00000302190 RFWD3Q6PCD5 774 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 ARHGAP22Q7Z5H3 698 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 CDKL3Q8IVW4 592 aaPredicted RBP14.54□□□□□ -0.08
SDC2-201ENST00000302190 CRYGNQ8WXF5 182 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 LRGUKQ96M69 825 aa14.54□□□□□ -0.08
SDC2-201ENST00000302190 DENND2DQ9H6A0 471 aaPredicted RBP14.54□□□□□ -0.08
SDC2-201ENST00000302190 PRRC2BQ5JSZ5 2229 aaKnown RBP14.53□□□□□ -0.08
SDC2-201ENST00000302190 VNN1O95497 513 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 AKAP5P24588 427 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 SLC25A3Q00325 362 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 ITGA9Q13797 1035 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 CYTH1Q15438 398 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 CWF19L1Q69YN2 538 aaKnown RBP14.53□□□□□ -0.08
SDC2-201ENST00000302190 CRELD2Q6UXH1 353 aaPredicted RBP14.53□□□□□ -0.08
SDC2-201ENST00000302190 LRRC43Q8N309 656 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 CPT1BQ92523 772 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 DPP3Q9NY33 737 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 SLC39A10Q9ULF5 831 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 NOD1Q9Y239 953 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 WDR27A2RRH5 827 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 LYPLA1O75608 230 aaPredicted RBP14.53□□□□□ -0.08
SDC2-201ENST00000302190 TBC1D25Q3MII6 688 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 DSTYKQ6XUX3 929 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 TMEM192Q8IY95 271 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 HDAC11Q96DB2 347 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 OXNAD1Q96HP4 312 aaPredicted RBP14.53□□□□□ -0.08
SDC2-201ENST00000302190 CNPY3Q9BT09 278 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 NMUR2Q9GZQ4 415 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 ZMYND8Q9ULU4 1186 aaPredicted RBP14.53□□□□□ -0.08
SDC2-201ENST00000302190 TIMM13Q9Y5L4 95 aaPredicted RBP14.53□□□□□ -0.08
SDC2-201ENST00000302190 PSME4Q14997 1843 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 USP1O94782 785 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 ASS1P00966 412 aaKnown RBP14.53□□□□□ -0.08
SDC2-201ENST00000302190 FESP07332 822 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 INSRRP14616 1297 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 OGDHQ02218 1023 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 FKBP1CQ5VVH2 108 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 NIPA1Q7RTP0 329 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 SCUBE1Q8IWY4 988 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 C12orf56Q8IXR9 622 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 VCPIP1Q96JH7 1222 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 BTBD10Q9BSF8 475 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 NKX1-2Q9UD57 310 aaPredicted RBP14.53□□□□□ -0.08
SDC2-201ENST00000302190 STARD13Q9Y3M8 1113 aa14.53□□□□□ -0.08
SDC2-201ENST00000302190 ZNF536O15090 1300 aa14.52□□□□□ -0.08
SDC2-201ENST00000302190 NPM3O75607 178 aaKnown RBP14.52□□□□□ -0.08
SDC2-201ENST00000302190 MX2P20592 715 aa14.52□□□□□ -0.08
SDC2-201ENST00000302190 ATP4AP20648 1035 aa14.52□□□□□ -0.08
SDC2-201ENST00000302190 ARPP19P56211 112 aa14.52□□□□□ -0.08
SDC2-201ENST00000302190 UBAP2LQ14157 1087 aaKnown RBP14.52□□□□□ -0.08
SDC2-201ENST00000302190 PLEKHA7Q6IQ23 1121 aa14.52□□□□□ -0.08
SDC2-201ENST00000302190 CLNKQ7Z7G1 428 aa14.52□□□□□ -0.08
SDC2-201ENST00000302190 NDRG1Q92597 394 aaKnown RBP14.52□□□□□ -0.08
SDC2-201ENST00000302190 DFFAO00273 331 aa14.52□□□□□ -0.09
SDC2-201ENST00000302190 ALOX15BO15296 676 aa14.52□□□□□ -0.09
SDC2-201ENST00000302190 SLC5A9Q2M3M2 681 aa14.52□□□□□ -0.09
SDC2-201ENST00000302190 MSS51Q4VC12 460 aa14.52□□□□□ -0.09
SDC2-201ENST00000302190 KCNT2Q6UVM3 1135 aa14.52□□□□□ -0.09
SDC2-201ENST00000302190 PHF13Q86YI8 300 aaPredicted RBP14.52□□□□□ -0.09
SDC2-201ENST00000302190 TASP1Q9H6P5 420 aa14.52□□□□□ -0.09
SDC2-201ENST00000302190 TMEM63AO94886 807 aa14.52□□□□□ -0.09
SDC2-201ENST00000302190 TOP3BO95985 862 aaKnown RBP14.52□□□□□ -0.09
SDC2-201ENST00000302190 KCNA2P16389 499 aa14.52□□□□□ -0.09
SDC2-201ENST00000302190 CYP2F1P24903 491 aa14.52□□□□□ -0.09
SDC2-201ENST00000302190 SP2Q02086 613 aa14.52□□□□□ -0.09
SDC2-201ENST00000302190 KHDC1Q4VXA5 237 aaKnown RBP14.52□□□□□ -0.09
SDC2-201ENST00000302190 PDZD4Q76G19 769 aaPredicted RBP14.52□□□□□ -0.09
SDC2-201ENST00000302190 CEP70Q8NHQ1 597 aa14.52□□□□□ -0.09
SDC2-201ENST00000302190 SLC7A14Q8TBB6 771 aa14.52□□□□□ -0.09
SDC2-201ENST00000302190 MIPOL1Q8TD10 442 aa14.52□□□□□ -0.09
SDC2-201ENST00000302190 ABTB1Q969K4 478 aaPredicted RBP14.52□□□□□ -0.09
SDC2-201ENST00000302190 EPAS1Q99814 870 aa14.52□□□□□ -0.09
SDC2-201ENST00000302190 SMARCAD1Q9H4L7 1026 aa14.52□□□□□ -0.09
SDC2-201ENST00000302190 TMEM165Q9HC07 324 aa14.52□□□□□ -0.09
SDC2-201ENST00000302190 ARHGAP28Q9P2N2 729 aa14.52□□□□□ -0.09
SDC2-201ENST00000302190 SLC17A6Q9P2U8 582 aa14.52□□□□□ -0.09
SDC2-201ENST00000302190 SLC12A4Q9UP95 1085 aa14.52□□□□□ -0.09
SDC2-201ENST00000302190 ARFGEF1Q9Y6D6 1849 aa14.51□□□□□ -0.09
SDC2-201ENST00000302190 DYNC1LI2O43237 492 aaPredicted RBP14.51□□□□□ -0.09
SDC2-201ENST00000302190 UGT1A9O60656 530 aa14.51□□□□□ -0.09
SDC2-201ENST00000302190 IL1R2P27930 398 aa14.51□□□□□ -0.09
SDC2-201ENST00000302190 CDKN2BP42772 138 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms