RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 CRADDP78560 199 aa16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 SOX4Q06945 474 aaPredicted RBP16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 STILQ15468 1287 aa16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 PLEKHH3Q7Z736 793 aa16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 NT5DC4Q86YG4 428 aa16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 MPP5Q8N3R9 675 aa16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 GRAMD1AQ96CP6 724 aa16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 TBCBQ99426 244 aa16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 SLC13A1Q9BZW2 595 aa16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 L3MBTL1Q9Y468 752 aa16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 TRIM49D1C9J1S8 452 aa16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 ZWINTO95229 277 aa16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 MYL3P08590 195 aa16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 GOT1P17174 413 aa16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 GTF2A2P52657 109 aa16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 CASC4Q6P4E1 433 aa16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 KCNT2Q6UVM3 1135 aa16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 LRRC6Q86X45 466 aa16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 GBP7Q8N8V2 638 aaPredicted RBP16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 KBTBD7Q8WVZ9 684 aa16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 SEPT10Q9P0V9 454 aa16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 STARD13Q9Y3M8 1113 aa16.4■□□□□ 0.22
NCKIPSD-201ENST00000294129 MGRN1O60291 552 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 CBX6O95503 412 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 DARSP14868 501 aaKnown RBP16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 TKTP29401 623 aaKnown RBP16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 ADIGQ0VDE8 80 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 BST2Q10589 180 aaKnown RBP16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 RNF43Q68DV7 783 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 TTC39CQ8N584 583 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 MZB1Q8WU39 189 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 ZFP42Q96MM3 310 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 PLCD4Q9BRC7 762 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 SLC5A4Q9NY91 659 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 ZSWIM8A7E2V4 1837 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 IQANK1A0A1B0GTG1 560 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 C2orf71A6NGG8 1288 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 L1CAMP32004 1257 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 NME3Q13232 169 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 GRB14Q14449 540 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 DCAF6Q58WW2 860 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 DENND5BQ6ZUT9 1274 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 CAND1Q86VP6 1230 aaKnown RBP16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 BANPQ8N9N5 519 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 APPL2Q8NEU8 664 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 KCTD15Q96SI1 283 aaPredicted RBP16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 LGMNQ99538 433 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 PTPN18Q99952 460 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 IQCGQ9H095 443 aaKnown RBP16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 PLEKHA5Q9HAU0 1116 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 USH1CQ9Y6N9 552 aa16.39■□□□□ 0.21
NCKIPSD-201ENST00000294129 CHADO15335 359 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 TGM2P21980 687 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 TRMT10BQ6PF06 316 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 TLK2Q86UE8 772 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 RFWD2Q8NHY2 731 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 DHRS4Q9BTZ2 278 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 UBQLN1Q9UMX0 589 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 CCDC195A0A1B0GUA6 201 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 CFAP73A6NFT4 308 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 CREB3O43889 395 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 STAU1O95793 577 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 BGNP21810 368 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 NDUFV1P49821 464 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 BCAT1P54687 386 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 IRX4P78413 519 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 ZBTB6Q15916 424 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 SLC9A4Q6AI14 798 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 TWF2Q6IBS0 349 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 APBB1IPQ7Z5R6 666 aaPredicted RBP16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 VPS52Q8N1B4 723 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 GIMAP7Q8NHV1 300 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 ADAM32Q8TC27 787 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 SLC44A1Q8WWI5 657 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 MECRQ9BV79 373 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 MANSC1Q9H8J5 431 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 SLC17A6Q9P2U8 582 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 RRN3P2A6NIE6 340 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 RARBP10826 455 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 ALDH3A1P30838 453 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 SULT1E1P49888 294 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 MFSD10Q14728 455 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 SNX17Q15036 470 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 CCL14Q16627 93 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 FYB2Q5VWT5 728 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 OLFML2BQ68BL8 750 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 IQSEC1Q6DN90 963 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 CTU1Q7Z7A3 348 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 ADGRF2Q8IZF7 708 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 UNC5BQ8IZJ1 945 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 DEFB106AQ8N104 65 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 ANKRD52Q8NB46 1076 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 L3MBTL3Q96JM7 780 aaPredicted RBP16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 CSPG4P5Q96PW8 444 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 PPCSQ9HAB8 311 aa16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 TIMM13Q9Y5L4 95 aaPredicted RBP16.38■□□□□ 0.21
NCKIPSD-201ENST00000294129 DPYSL4O14531 572 aa16.37■□□□□ 0.21
NCKIPSD-201ENST00000294129 BEST1O76090 585 aa16.37■□□□□ 0.21
NCKIPSD-201ENST00000294129 PLEKHG4Q58EX7 1191 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms