RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 C18orf8Q96DM3 657 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 C1QTNF1Q9BXJ1 281 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 SYNCQ9H7C4 482 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 POPDC2Q9HBU9 364 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 ARHGEF3Q9NR81 526 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 DUS2Q9NX74 493 aaKnown RBP28.14■■■□□ 2.1
SSU72-201ENST00000291386 MARCH2Q9P0N8 246 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 TBC1D14Q9P2M4 693 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 RASAL2Q9UJF2 1139 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 SH3BP1Q9Y3L3 701 aa28.14■■■□□ 2.1
SSU72-201ENST00000291386 KRBA1A5PL33 1030 aa28.13■■■□□ 2.09
SSU72-201ENST00000291386 SLC9A3R1O14745 358 aaPredicted RBP28.13■■■□□ 2.09
SSU72-201ENST00000291386 GPR37L1O60883 481 aa28.13■■■□□ 2.09
SSU72-201ENST00000291386 SLC6A3Q01959 620 aa28.13■■■□□ 2.09
SSU72-201ENST00000291386 CENPCQ03188 943 aa28.13■■■□□ 2.09
SSU72-201ENST00000291386 MLF2Q15773 248 aaPredicted RBP28.13■■■□□ 2.09
SSU72-201ENST00000291386 CLEC16AQ2KHT3 1053 aa28.13■■■□□ 2.09
SSU72-201ENST00000291386 OR6B2Q6IFH4 312 aa28.13■■■□□ 2.09
SSU72-201ENST00000291386 TOGARAM2Q6ZUX3 1019 aa28.13■■■□□ 2.09
SSU72-201ENST00000291386 CSGALNACT1Q8TDX6 532 aa28.13■■■□□ 2.09
SSU72-201ENST00000291386 CPA5Q8WXQ8 436 aa28.13■■■□□ 2.09
SSU72-201ENST00000291386 FAM149B1Q96BN6 582 aa28.13■■■□□ 2.09
SSU72-201ENST00000291386 OTUB2Q96DC9 234 aa28.13■■■□□ 2.09
SSU72-201ENST00000291386 TRIM5Q9C035 493 aa28.13■■■□□ 2.09
SSU72-201ENST00000291386 C11orf16Q9NQ32 467 aa28.13■■■□□ 2.09
SSU72-201ENST00000291386 HPS4Q9NQG7 708 aa28.13■■■□□ 2.09
SSU72-201ENST00000291386 MMP8P22894 467 aa28.12■■■□□ 2.09
SSU72-201ENST00000291386 CASP14P31944 242 aa28.12■■■□□ 2.09
SSU72-201ENST00000291386 IFNAR2P48551 515 aa28.12■■■□□ 2.09
SSU72-201ENST00000291386 STARD6P59095 220 aa28.12■■■□□ 2.09
SSU72-201ENST00000291386 EML3Q32P44 896 aa28.12■■■□□ 2.09
SSU72-201ENST00000291386 IER5LQ5T953 404 aa28.12■■■□□ 2.09
SSU72-201ENST00000291386 SLC26A9Q7LBE3 791 aa28.12■■■□□ 2.09
SSU72-201ENST00000291386 MIB1Q86YT6 1006 aa28.12■■■□□ 2.09
SSU72-201ENST00000291386 CPLX3Q8WVH0 158 aa28.12■■■□□ 2.09
SSU72-201ENST00000291386 MSANTD3Q96H12 275 aa28.12■■■□□ 2.09
SSU72-201ENST00000291386 PIWIL1Q96J94 861 aaKnown RBP28.12■■■□□ 2.09
SSU72-201ENST00000291386 HAUS4Q9H6D7 363 aa28.12■■■□□ 2.09
SSU72-201ENST00000291386 HEBP1Q9NRV9 189 aa28.12■■■□□ 2.09
SSU72-201ENST00000291386 CA14Q9ULX7 337 aa28.12■■■□□ 2.09
SSU72-201ENST00000291386 HBS1LQ9Y450 684 aaKnown RBP28.12■■■□□ 2.09
SSU72-201ENST00000291386 WNT6Q9Y6F9 365 aa28.12■■■□□ 2.09
SSU72-201ENST00000291386 HSF2BPO75031 334 aa28.11■■■□□ 2.09
SSU72-201ENST00000291386 STC2O76061 302 aa28.11■■■□□ 2.09
SSU72-201ENST00000291386 NCAM1P13591 858 aa28.11■■■□□ 2.09
SSU72-201ENST00000291386 KLHL30Q0D2K2 578 aa28.11■■■□□ 2.09
SSU72-201ENST00000291386 RUNX3Q13761 415 aa28.11■■■□□ 2.09
SSU72-201ENST00000291386 ARID5BQ14865 1188 aa28.11■■■□□ 2.09
SSU72-201ENST00000291386 XYLT1Q86Y38 959 aa28.11■■■□□ 2.09
SSU72-201ENST00000291386 PHF13Q86YI8 300 aaPredicted RBP28.11■■■□□ 2.09
SSU72-201ENST00000291386 SIX5Q8N196 739 aa28.11■■■□□ 2.09
SSU72-201ENST00000291386 ATP2A3Q93084 1043 aa28.11■■■□□ 2.09
SSU72-201ENST00000291386 WBP2Q969T9 261 aa28.11■■■□□ 2.09
SSU72-201ENST00000291386 SHDQ96IW2 340 aa28.11■■■□□ 2.09
SSU72-201ENST00000291386 SLC2A13Q96QE2 648 aa28.11■■■□□ 2.09
SSU72-201ENST00000291386 DDX23Q9BUQ8 820 aaKnown RBP28.11■■■□□ 2.09
SSU72-201ENST00000291386 LINC00597Q9H2U6 94 aa28.11■■■□□ 2.09
SSU72-201ENST00000291386 GTSE1Q9NYZ3 720 aa28.11■■■□□ 2.09
SSU72-201ENST00000291386 BZW2Q9Y6E2 419 aaKnown RBP28.11■■■□□ 2.09
SSU72-201ENST00000291386 TRIOO75962 3097 aa28.1■■■□□ 2.09
SSU72-201ENST00000291386 TNFAIP3P21580 790 aa28.1■■■□□ 2.09
SSU72-201ENST00000291386 HNRNPH3P31942 346 aaKnown RBP28.1■■■□□ 2.09
SSU72-201ENST00000291386 NSFP46459 744 aaKnown RBP28.1■■■□□ 2.09
SSU72-201ENST00000291386 KPNA1P52294 538 aaPredicted RBP28.1■■■□□ 2.09
SSU72-201ENST00000291386 TNK2Q07912 1038 aa28.1■■■□□ 2.09
SSU72-201ENST00000291386 TAF5Q15542 800 aa28.1■■■□□ 2.09
SSU72-201ENST00000291386 ITPRIPL2Q3MIP1 535 aa28.1■■■□□ 2.09
SSU72-201ENST00000291386 HGSNATQ68CP4 663 aa28.1■■■□□ 2.09
SSU72-201ENST00000291386 TRIM68Q6AZZ1 485 aa28.1■■■□□ 2.09
SSU72-201ENST00000291386 PPP1R2P3Q6NXS1 205 aa28.1■■■□□ 2.09
SSU72-201ENST00000291386 ZNF571Q7Z3V5 609 aaPredicted RBP28.1■■■□□ 2.09
SSU72-201ENST00000291386 ADGRG2Q8IZP9 1017 aa28.1■■■□□ 2.09
SSU72-201ENST00000291386 TTC16Q8NEE8 873 aa28.1■■■□□ 2.09
SSU72-201ENST00000291386 PLD4Q96BZ4 506 aa28.1■■■□□ 2.09
SSU72-201ENST00000291386 EBF3Q9H4W6 596 aa28.1■■■□□ 2.09
SSU72-201ENST00000291386 C8orf33Q9H7E9 229 aaPredicted RBP28.1■■■□□ 2.09
SSU72-201ENST00000291386 SFMBT1Q9UHJ3 866 aa28.1■■■□□ 2.09
SSU72-201ENST00000291386 LSM7Q9UK45 103 aaKnown RBP28.1■■■□□ 2.09
SSU72-201ENST00000291386 NAALADL1Q9UQQ1 740 aa28.1■■■□□ 2.09
SSU72-201ENST00000291386 SLC12A8A0AV02 714 aa28.09■■■□□ 2.09
SSU72-201ENST00000291386 GSCP56915 257 aaPredicted RBP28.09■■■□□ 2.09
SSU72-201ENST00000291386 PTP4A2Q12974 167 aa28.09■■■□□ 2.09
SSU72-201ENST00000291386 NNTQ13423 1086 aa28.09■■■□□ 2.09
SSU72-201ENST00000291386 TRIP4Q15650 581 aaPredicted RBP28.09■■■□□ 2.09
SSU72-201ENST00000291386 C1orf228Q6PIY5 440 aa28.09■■■□□ 2.09
SSU72-201ENST00000291386 Q6ZNB5 142 aa28.09■■■□□ 2.09
SSU72-201ENST00000291386 DQX1Q8TE96 717 aaKnown RBP28.09■■■□□ 2.09
SSU72-201ENST00000291386 DCLK3Q9C098 648 aa28.09■■■□□ 2.09
SSU72-201ENST00000291386 ECT2Q9H8V3 914 aa28.09■■■□□ 2.09
SSU72-201ENST00000291386 ZNF510Q9Y2H8 683 aa28.09■■■□□ 2.09
SSU72-201ENST00000291386 SHISA7A6NL88 538 aa28.08■■■□□ 2.09
SSU72-201ENST00000291386 PRR33A8MZF0 331 aa28.08■■■□□ 2.09
SSU72-201ENST00000291386 CAPN9O14815 690 aa28.08■■■□□ 2.09
SSU72-201ENST00000291386 NFATC1O95644 943 aa28.08■■■□□ 2.09
SSU72-201ENST00000291386 IRF1P10914 325 aa28.08■■■□□ 2.09
SSU72-201ENST00000291386 ARSAP15289 507 aa28.08■■■□□ 2.09
SSU72-201ENST00000291386 SYPL2Q5VXT5 272 aa28.08■■■□□ 2.09
SSU72-201ENST00000291386 ARCQ7LC44 396 aa28.08■■■□□ 2.09
SSU72-201ENST00000291386 DRC7Q8IY82 874 aa28.08■■■□□ 2.09
SSU72-201ENST00000291386 CPA6Q8N4T0 437 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms