RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 CILPO75339 1184 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 ZNF217O75362 1048 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 CFIP05156 583 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 HNRNPLP14866 589 aaKnown RBP eCLIP14.78□□□□□ -0.044e-7■■□□□ 13.3
TPM1-202ENST00000288398 DGKGP49619 791 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 MXI1P50539 228 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 RPL6Q02878 288 aaKnown RBP14.78□□□□□ -0.04
TPM1-202ENST00000288398 PPP3CAQ08209 521 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 DPYDQ12882 1025 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 KLHDC10Q6PID8 442 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 RSRC2Q7L4I2 434 aaKnown RBP14.78□□□□□ -0.04
TPM1-202ENST00000288398 GPRIN1Q7Z2K8 1008 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 RABEPKQ7Z6M1 372 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 SYT12Q8IV01 421 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 PHTF2Q8N3S3 785 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 BHMTQ93088 406 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 TWNKQ96RR1 684 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 TSG101Q99816 390 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 DUSP16Q9BY84 665 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 APOBEC3GQ9HC16 384 aaKnown RBP14.78□□□□□ -0.04
TPM1-202ENST00000288398 EVLQ9UI08 416 aaPredicted RBP14.78□□□□□ -0.04
TPM1-202ENST00000288398 RASAL2Q9UJF2 1139 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 STRIP2Q9ULQ0 834 aa14.78□□□□□ -0.04
TPM1-202ENST00000288398 MYH10P35580 1976 aa14.77□□□□□ -0.04
TPM1-202ENST00000288398 EPG5Q9HCE0 2579 aa14.77□□□□□ -0.04
TPM1-202ENST00000288398 PATE3B3GLJ2 98 aa14.77□□□□□ -0.05
TPM1-202ENST00000288398 CYBBP04839 570 aa14.77□□□□□ -0.05
TPM1-202ENST00000288398 PMLP29590 882 aa14.77□□□□□ -0.05
TPM1-202ENST00000288398 MAPK8P45983 427 aa14.77□□□□□ -0.05
TPM1-202ENST00000288398 COG7P83436 770 aa14.77□□□□□ -0.05
TPM1-202ENST00000288398 ZNF252P-AS1Q0IIN9 211 aa14.77□□□□□ -0.05
TPM1-202ENST00000288398 STARD3Q14849 445 aa14.77□□□□□ -0.05
TPM1-202ENST00000288398 E2F5Q15329 346 aa14.77□□□□□ -0.05
TPM1-202ENST00000288398 C1orf220Q5T0J3 134 aa14.77□□□□□ -0.05
TPM1-202ENST00000288398 SH3PXD2AQ5TCZ1 1133 aa14.77□□□□□ -0.05
TPM1-202ENST00000288398 TCERG1LQ5VWI1 586 aa14.77□□□□□ -0.05
TPM1-202ENST00000288398 CCDC186Q7Z3E2 898 aa14.77□□□□□ -0.05
TPM1-202ENST00000288398 FBXL13Q8NEE6 735 aa14.77□□□□□ -0.05
TPM1-202ENST00000288398 CEP76Q8TAP6 659 aa14.77□□□□□ -0.05
TPM1-202ENST00000288398 FAXDC2Q96IV6 333 aa14.77□□□□□ -0.05
TPM1-202ENST00000288398 DCLK3Q9C098 648 aa14.77□□□□□ -0.05
TPM1-202ENST00000288398 SLC32A1Q9H598 525 aa14.77□□□□□ -0.05
TPM1-202ENST00000288398 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.77□□□□□ -0.053e-7■■■□□ 15.3
TPM1-202ENST00000288398 MARK1Q9P0L2 795 aa14.77□□□□□ -0.05
TPM1-202ENST00000288398 CALCOCO1Q9P1Z2 691 aa14.77□□□□□ -0.05
TPM1-202ENST00000288398 NUDT5Q9UKK9 219 aa14.77□□□□□ -0.05
TPM1-202ENST00000288398 STARD13Q9Y3M8 1113 aa14.77□□□□□ -0.05
TPM1-202ENST00000288398 FAM237AA0A1B0GTK4 181 aa14.76□□□□□ -0.05
TPM1-202ENST00000288398 MDM4O15151 490 aa14.76□□□□□ -0.05
TPM1-202ENST00000288398 NDUFS2O75306 463 aa14.76□□□□□ -0.05
TPM1-202ENST00000288398 ZNF202O95125 648 aa14.76□□□□□ -0.05
TPM1-202ENST00000288398 HOXD12P35452 270 aa14.76□□□□□ -0.05
TPM1-202ENST00000288398 CHKAP35790 457 aa14.76□□□□□ -0.05
TPM1-202ENST00000288398 PTGER3P43115 390 aa14.76□□□□□ -0.05
TPM1-202ENST00000288398 KIF11P52732 1056 aa14.76□□□□□ -0.05
TPM1-202ENST00000288398 YWHAEP62258 255 aaKnown RBP14.76□□□□□ -0.05
TPM1-202ENST00000288398 IRX4P78413 519 aa14.76□□□□□ -0.05
TPM1-202ENST00000288398 EDRF1Q3B7T1 1238 aa14.76□□□□□ -0.05
TPM1-202ENST00000288398 MAP7D1Q3KQU3 841 aa14.76□□□□□ -0.05
TPM1-202ENST00000288398 DCAF17Q5H9S7 520 aaPredicted RBP14.76□□□□□ -0.05
TPM1-202ENST00000288398 PPP1R26Q5T8A7 1209 aaPredicted RBP14.76□□□□□ -0.05
TPM1-202ENST00000288398 EGFLAMQ63HQ2 1017 aa14.76□□□□□ -0.05
TPM1-202ENST00000288398 HDDC3Q8N4P3 179 aa14.76□□□□□ -0.05
TPM1-202ENST00000288398 UCMAQ8WVF2 138 aa14.76□□□□□ -0.05
TPM1-202ENST00000288398 WBP2Q969T9 261 aa14.76□□□□□ -0.05
TPM1-202ENST00000288398 TMEM176AQ96HP8 235 aa14.76□□□□□ -0.05
TPM1-202ENST00000288398 NMUR1Q9HB89 426 aa14.76□□□□□ -0.05
TPM1-202ENST00000288398 OSER1Q9NX31 292 aa14.76□□□□□ -0.05
TPM1-202ENST00000288398 RAB20Q9NX57 234 aa14.76□□□□□ -0.05
TPM1-202ENST00000288398 CLIC5Q9NZA1 410 aa14.76□□□□□ -0.05
TPM1-202ENST00000288398 THADAQ6YHU6 1953 aa14.76□□□□□ -0.05
TPM1-202ENST00000288398 CNOT1A5YKK6 2376 aaKnown RBP14.75□□□□□ -0.05
TPM1-202ENST00000288398 ATXN2Q99700 1313 aaKnown RBP14.75□□□□□ -0.05
TPM1-202ENST00000288398 HHLA1C9JL84 531 aa14.75□□□□□ -0.05
TPM1-202ENST00000288398 TRIM24O15164 1050 aa14.75□□□□□ -0.05
TPM1-202ENST00000288398 HMBSP08397 361 aa14.75□□□□□ -0.05
TPM1-202ENST00000288398 GABRG2P18507 467 aa14.75□□□□□ -0.05
TPM1-202ENST00000288398 PGFP49763 221 aa14.75□□□□□ -0.05
TPM1-202ENST00000288398 SHC2P98077 582 aa14.75□□□□□ -0.05
TPM1-202ENST00000288398 ARID5AQ03989 594 aa14.75□□□□□ -0.05
TPM1-202ENST00000288398 GFPT1Q06210 699 aaPredicted RBP14.75□□□□□ -0.05
TPM1-202ENST00000288398 EFEMP1Q12805 493 aa14.75□□□□□ -0.05
TPM1-202ENST00000288398 FOXC1Q12948 553 aa14.75□□□□□ -0.05
TPM1-202ENST00000288398 DUOXA1Q1HG43 343 aa14.75□□□□□ -0.05
TPM1-202ENST00000288398 KIAA1324Q6UXG2 1013 aaKnown RBP14.75□□□□□ -0.05
TPM1-202ENST00000288398 IPO4Q8TEX9 1081 aaKnown RBP14.75□□□□□ -0.05
TPM1-202ENST00000288398 GTPBP2Q9BX10 602 aaKnown RBP14.75□□□□□ -0.05
TPM1-202ENST00000288398 FAM124BQ9H5Z6 455 aaPredicted RBP14.75□□□□□ -0.05
TPM1-202ENST00000288398 CISHQ9NSE2 258 aa14.75□□□□□ -0.05
TPM1-202ENST00000288398 PLK2Q9NYY3 685 aa14.75□□□□□ -0.05
TPM1-202ENST00000288398 HESX1Q9UBX0 185 aa14.75□□□□□ -0.05
TPM1-202ENST00000288398 MBD1Q9UIS9 605 aaPredicted RBP14.75□□□□□ -0.05
TPM1-202ENST00000288398 HOOK1Q9UJC3 728 aaKnown RBP14.75□□□□□ -0.05
TPM1-202ENST00000288398 CACNA1BQ00975 2339 aa14.74□□□□□ -0.05
TPM1-202ENST00000288398 GFRA2O00451 464 aa14.74□□□□□ -0.05
TPM1-202ENST00000288398 STC2O76061 302 aa14.74□□□□□ -0.05
TPM1-202ENST00000288398 SMC2O95347 1197 aa14.74□□□□□ -0.05
TPM1-202ENST00000288398 CEACAM1P13688 526 aa14.74□□□□□ -0.05
TPM1-202ENST00000288398 ENGP17813 658 aa14.74□□□□□ -0.05
TPM1-202ENST00000288398 CSRP1P21291 193 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms