RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 CDH5P33151 784 aaPredicted RBP9.63□□□□□ -0.87
HMGN1-201ENST00000288344 RPS9P46781 194 aaKnown RBP9.63□□□□□ -0.87
HMGN1-201ENST00000288344 SOX9P48436 509 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 COPB1P53618 953 aaKnown RBP9.63□□□□□ -0.87
HMGN1-201ENST00000288344 BCAT1P54687 386 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 MFAP3P55082 362 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 RUNX3Q13761 415 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 CCINQ13939 588 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 MTF1Q14872 753 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 STILQ15468 1287 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 GOLGA7BQ2TAP0 167 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 ANO6Q4KMQ2 910 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 NAIF1Q69YI7 327 aaPredicted RBP9.63□□□□□ -0.87
HMGN1-201ENST00000288344 TRIM68Q6AZZ1 485 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 DENND1BQ6P3S1 775 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 RHBDF2Q6PJF5 856 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 Q6ZNB5 142 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 RALGPS2Q86X27 583 aaPredicted RBP9.63□□□□□ -0.87
HMGN1-201ENST00000288344 SECISBP2LQ93073 1101 aaKnown RBP9.63□□□□□ -0.87
HMGN1-201ENST00000288344 SHDQ96IW2 340 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 CALR3Q96L12 384 aaKnown RBP9.63□□□□□ -0.87
HMGN1-201ENST00000288344 GCNAQ96QF7 691 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 PRR14Q9BWN1 585 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 VPS16Q9H269 839 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 LHX5Q9H2C1 402 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 CNGB3Q9NQW8 809 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 TLR8Q9NR97 1041 aaKnown RBP9.63□□□□□ -0.87
HMGN1-201ENST00000288344 TAB2Q9NYJ8 693 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 SIT1Q9Y3P8 196 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 FHOD1Q9Y613 1164 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 CPQQ9Y646 472 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 ZNF292O60281 2723 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 MYO18AQ92614 2054 aaKnown RBP9.63□□□□□ -0.87
HMGN1-201ENST00000288344 MIA3Q5JRA6 1907 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 E2F8A0AVK6 867 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 FAM170BA6NMN3 283 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 YJEFN3A6XGL0 299 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 LGALS16A8MUM7 142 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 E7ENQ6 273 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 SPECC1L-ADORA2AF8WAN1 911 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 TEX33O43247 280 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 ZBED1O96006 694 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 CKMP06732 381 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 DCNP07585 359 aaKnown RBP9.62□□□□□ -0.87
HMGN1-201ENST00000288344 PNMA6AP0CW24 399 aaPredicted RBP9.62□□□□□ -0.87
HMGN1-201ENST00000288344 GJA4P35212 333 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 PDE6CP51160 858 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 TKTL1P51854 596 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 DAOAP59103 153 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 KCNC4Q03721 635 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 VAC14Q08AM6 782 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 MESP2Q0VG99 397 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 DRAP1Q14919 205 aaPredicted RBP9.62□□□□□ -0.87
HMGN1-201ENST00000288344 NR1I3Q14994 352 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 PDGFRLQ15198 375 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 ITPRIPL2Q3MIP1 535 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 TMEM196Q5HYL7 178 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 ARTNQ5T4W7 220 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 ZNF852Q6ZMS4 543 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 TPRG1Q6ZUI0 275 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 BEND5Q7L4P6 421 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 SLC47A2Q86VL8 602 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 PHTF2Q8N3S3 785 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 DTWD2Q8NBA8 298 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 MSANTD3Q96H12 275 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 NAP1L5Q96NT1 182 aaPredicted RBP9.62□□□□□ -0.87
HMGN1-201ENST00000288344 USB1Q9BQ65 265 aaKnown RBP9.62□□□□□ -0.87
HMGN1-201ENST00000288344 STK33Q9BYT3 514 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 ULBP1Q9BZM6 244 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 EBF3Q9H4W6 596 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 C8orf33Q9H7E9 229 aaPredicted RBP9.62□□□□□ -0.87
HMGN1-201ENST00000288344 ECT2Q9H8V3 914 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 FBXL21Q9UKT6 434 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 WNT6Q9Y6F9 365 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 PIAS3Q9Y6X2 628 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 ATG2BQ96BY7 2078 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 MYO16Q9Y6X6 1858 aa9.62□□□□□ -0.87
HMGN1-201ENST00000288344 RIF1Q5UIP0 2472 aaKnown RBP9.62□□□□□ -0.87
HMGN1-201ENST00000288344 ZFHX2Q9C0A1 2572 aaPredicted RBP9.61□□□□□ -0.87
HMGN1-201ENST00000288344 GPR179Q6PRD1 2367 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 ANTXRLA6NF34 631 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 MAN2B1O00754 1011 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 PAPSS1O43252 624 aaPredicted RBP9.61□□□□□ -0.87
HMGN1-201ENST00000288344 STC2O76061 302 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 LETM1O95202 739 aaPredicted RBP9.61□□□□□ -0.87
HMGN1-201ENST00000288344 IGLV3-27P01718 113 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 RARGP13631 454 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 CD19P15391 556 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 CHRNB2P17787 502 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 ATP5C1P36542 298 aaKnown RBP9.61□□□□□ -0.87
HMGN1-201ENST00000288344 PBX1P40424 430 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 OPRD1P41143 372 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 ZNF165P49910 485 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 GALK1P51570 392 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 TPD52L1Q16890 204 aaPredicted RBP9.61□□□□□ -0.87
HMGN1-201ENST00000288344 ARHGAP44Q17R89 818 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 BSPRYQ5W0U4 402 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 FSTL4Q6MZW2 842 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 MSANTD2Q6P1R3 559 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 CREBRFQ8IUR6 639 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms