RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 ATXN1P54253 815 aaKnown RBP13.4□□□□□ -0.26
CPSF6-201ENST00000266679 FCGRTP55899 365 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 HDAC4P56524 1084 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 YWHAZP63104 245 aaKnown RBP13.4□□□□□ -0.26
CPSF6-201ENST00000266679 PTK7Q13308 1070 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 APBB1IPQ7Z5R6 666 aaPredicted RBP13.4□□□□□ -0.26
CPSF6-201ENST00000266679 TMEM110Q86TL2 294 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 AGGF1Q8N302 714 aaeCLIP13.4□□□□□ -0.263e-8■□□□□ 9.1
CPSF6-201ENST00000266679 CCDC33Q8N5R6 958 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 TCP10LQ8TDR4 215 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 SLC35F5Q8WV83 523 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 KLHL29Q96CT2 875 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 CYTH2Q99418 400 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 MYLK2Q9H1R3 596 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 SLC17A7Q9P2U7 560 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 TEX264Q9Y6I9 313 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 DNAH12Q6ZR08 3092 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 STRNO43815 780 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 GPR32O75388 356 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 ELNP15502 786 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 SOWAHAQ2M3V2 549 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 KBTBD12Q3ZCT8 623 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 C9orf57Q5W0N0 161 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 NOTUMQ6P988 496 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 ZNF75CPQ92670 426 aaPredicted RBP13.4□□□□□ -0.26
CPSF6-201ENST00000266679 TMEM106CQ9BVX2 250 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 TRIM6Q9C030 488 aaPredicted RBP13.4□□□□□ -0.26
CPSF6-201ENST00000266679 KLK14Q9P0G3 267 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 SLC45A1Q9Y2W3 748 aa13.4□□□□□ -0.26
CPSF6-201ENST00000266679 SZT2Q5T011 3432 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 MT-ND3P03897 115 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 SMIM10L2AP0DMW4 78 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 SMIM10L2BP0DMW5 78 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 HOXD8P13378 290 aaPredicted RBP13.39□□□□□ -0.27
CPSF6-201ENST00000266679 CYP2F1P24903 491 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 ZNF200P98182 395 aaPredicted RBP13.39□□□□□ -0.27
CPSF6-201ENST00000266679 FAAP100Q0VG06 881 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 GRB14Q14449 540 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 SLC9A4Q6AI14 798 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 LRRC52Q8N7C0 313 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 BANPQ8N9N5 519 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 NPLOC4Q8TAT6 608 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 CCDC110Q8TBZ0 833 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 TBCBQ99426 244 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 MAGEB5Q9BZ81 275 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 DHX35Q9H5Z1 703 aaKnown RBP13.39□□□□□ -0.27
CPSF6-201ENST00000266679 NOD2Q9HC29 1040 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 ALG13Q9NP73 1137 aaKnown RBP13.39□□□□□ -0.27
CPSF6-201ENST00000266679 ETNK2Q9NVF9 386 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 MORF4L1Q9UBU8 362 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 TTLL3Q9Y4R7 772 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 IKBKGQ9Y6K9 419 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 USH1CQ9Y6N9 552 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 IQANK1A0A1B0GTG1 560 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 CFAP69A5D8W1 941 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 TNPO2O14787 897 aaKnown RBP13.39□□□□□ -0.27
CPSF6-201ENST00000266679 INHBAP08476 426 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 CYP2C9P11712 490 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 GRK4P32298 578 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 CCDC15Q0P6D6 951 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 ZBTB6Q15916 424 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 ARHGAP17Q68EM7 881 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 OTOAQ7RTW8 1153 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 PRPF39Q86UA1 669 aaKnown RBP13.39□□□□□ -0.27
CPSF6-201ENST00000266679 SLC44A1Q8WWI5 657 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 USP6NLQ92738 828 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 ERP27Q96DN0 273 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 RTP4Q96DX8 246 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 SERAC1Q96JX3 654 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 ZNF670Q9BS34 389 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 TINF2Q9BSI4 451 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 KLC2Q9H0B6 622 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 NRDE2Q9H7Z3 1164 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 STK38LQ9Y2H1 464 aa13.39□□□□□ -0.27
CPSF6-201ENST00000266679 ZNF638Q14966 1978 aaKnown RBP13.38□□□□□ -0.27
CPSF6-201ENST00000266679 BCLAF3A2AJT9 711 aaKnown RBP13.38□□□□□ -0.27
CPSF6-201ENST00000266679 RRN3P2A6NIE6 340 aa13.38□□□□□ -0.27
CPSF6-201ENST00000266679 MDM4O15151 490 aa13.38□□□□□ -0.27
CPSF6-201ENST00000266679 DYNC1LI2O43237 492 aaPredicted RBP13.38□□□□□ -0.27
CPSF6-201ENST00000266679 FAM155BO75949 473 aa13.38□□□□□ -0.27
CPSF6-201ENST00000266679 GNRH1P01148 92 aa13.38□□□□□ -0.27
CPSF6-201ENST00000266679 APRTP07741 180 aa13.38□□□□□ -0.27
CPSF6-201ENST00000266679 KRT16P08779 473 aa13.38□□□□□ -0.27
CPSF6-201ENST00000266679 ALADP13716 330 aa13.38□□□□□ -0.27
CPSF6-201ENST00000266679 IBSPP21815 317 aaPredicted RBP13.38□□□□□ -0.27
CPSF6-201ENST00000266679 FLT3LGP49771 235 aa13.38□□□□□ -0.27
CPSF6-201ENST00000266679 GBE1Q04446 702 aa13.38□□□□□ -0.27
CPSF6-201ENST00000266679 BST2Q10589 180 aaKnown RBP13.38□□□□□ -0.27
CPSF6-201ENST00000266679 SETDB1Q15047 1291 aa13.38□□□□□ -0.27
CPSF6-201ENST00000266679 SWT1Q5T5J6 900 aaKnown RBP13.38□□□□□ -0.27
CPSF6-201ENST00000266679 ZNF618Q5T7W0 954 aa13.38□□□□□ -0.27
CPSF6-201ENST00000266679 UNC93AQ86WB7 457 aa13.38□□□□□ -0.27
CPSF6-201ENST00000266679 CEP57Q86XR8 500 aa13.38□□□□□ -0.27
CPSF6-201ENST00000266679 CDKL3Q8IVW4 592 aaPredicted RBP13.38□□□□□ -0.27
CPSF6-201ENST00000266679 KBTBD7Q8WVZ9 684 aa13.38□□□□□ -0.27
CPSF6-201ENST00000266679 C10orf82Q8WW14 230 aa13.38□□□□□ -0.27
CPSF6-201ENST00000266679 LENG1Q96BZ8 264 aaPredicted RBP13.38□□□□□ -0.27
CPSF6-201ENST00000266679 KCTD15Q96SI1 283 aaPredicted RBP13.38□□□□□ -0.27
CPSF6-201ENST00000266679 ABHD16BQ9H3Z7 469 aa13.38□□□□□ -0.27
CPSF6-201ENST00000266679 NPHS2Q9NP85 383 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms