RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 SLC18A2Q05940 514 aa11.22□□□□□ -0.61
CHRNA1-201ENST00000261007 CDC16Q13042 620 aa11.22□□□□□ -0.61
CHRNA1-201ENST00000261007 PCBP1Q15365 356 aaKnown RBP eCLIP11.22□□□□□ -0.61
CHRNA1-201ENST00000261007 HIF1AQ16665 826 aa11.22□□□□□ -0.61
CHRNA1-201ENST00000261007 DCUN1D2Q6PH85 259 aa11.22□□□□□ -0.61
CHRNA1-201ENST00000261007 RIPOR1Q6ZS17 1223 aa11.22□□□□□ -0.61
CHRNA1-201ENST00000261007 FNIP1Q8TF40 1166 aa11.22□□□□□ -0.61
CHRNA1-201ENST00000261007 DCAKDQ8WVC6 231 aa11.22□□□□□ -0.61
CHRNA1-201ENST00000261007 NKD2Q969F2 451 aaPredicted RBP11.22□□□□□ -0.61
CHRNA1-201ENST00000261007 PAFAH2Q99487 392 aa11.22□□□□□ -0.61
CHRNA1-201ENST00000261007 ADPGKQ9BRR6 497 aa11.22□□□□□ -0.61
CHRNA1-201ENST00000261007 R3HDMLQ9H3Y0 253 aa11.22□□□□□ -0.61
CHRNA1-201ENST00000261007 RNPEPQ9H4A4 650 aa11.22□□□□□ -0.61
CHRNA1-201ENST00000261007 IFT122Q9HBG6 1241 aa11.22□□□□□ -0.61
CHRNA1-201ENST00000261007 PDGFCQ9NRA1 345 aa11.22□□□□□ -0.61
CHRNA1-201ENST00000261007 SLC17A7Q9P2U7 560 aa11.22□□□□□ -0.61
CHRNA1-201ENST00000261007 TAGLN3Q9UI15 199 aa11.22□□□□□ -0.61
CHRNA1-201ENST00000261007 DNPEPQ9ULA0 475 aa11.22□□□□□ -0.61
CHRNA1-201ENST00000261007 CLUHO75153 1309 aa11.22□□□□□ -0.61
CHRNA1-201ENST00000261007 ANK1P16157 1881 aa11.22□□□□□ -0.61
CHRNA1-201ENST00000261007 IQANK1A0A1B0GTG1 560 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 TCRBV5S1A1TA0A578 114 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 RRN3P2A6NIE6 340 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 BTBD19C9JJ37 291 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 E7ESA3 106 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 SPECC1L-ADORA2AF8WAN1 911 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 LPXNO60711 386 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 CALCAP01258 141 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 STAG3L1P0CL83 205 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 CYP2C8P10632 490 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 MYL2P10916 166 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 PYGBP11216 843 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 HOXD8P13378 290 aaPredicted RBP11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 CD58P19256 250 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 VCPP55072 806 aaKnown RBP11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 ASPHQ12797 758 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 OASLQ15646 514 aaKnown RBP11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 EEF1DP3Q658K8 133 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 PDSS2Q86YH6 399 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 ULK2Q8IYT8 1036 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 PYROXD1Q8WU10 500 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 TRAPPC12Q8WVT3 735 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 PRR11Q96HE9 360 aaPredicted RBP11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 APOPT1Q96IL0 206 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 PANX3Q96QZ0 392 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 PARK7Q99497 189 aaKnown RBP11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 FAM118BQ9BPY3 351 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 FRMD8P1Q9BZ68 369 aaPredicted RBP11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 CNTN3Q9P232 1028 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 ITGA11Q9UKX5 1188 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 AKT3Q9Y243 479 aa11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 FARP1Q9Y4F1 1045 aaPredicted RBP11.21□□□□□ -0.61
CHRNA1-201ENST00000261007 CCL15-CCL14A0A0B4J2E2 113 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 B4GALT5O43286 388 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 AP1G1O43747 822 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 MT-ND3P03897 115 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 CXCL8P10145 99 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 MED21Q13503 144 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 ACAP1Q15027 740 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 CCL15Q16663 113 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 DCAF4L1Q3SXM0 396 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 MAP3K21Q5TCX8 1036 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 IQSEC1Q6DN90 963 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 POLNQ7Z5Q5 900 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 PPIL6Q8IXY8 311 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 GLIS1Q8NBF1 620 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 IRGQQ8WZA9 623 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 HIC2Q96JB3 615 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 C7orf26Q96N11 449 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 SLITRK1Q96PX8 696 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 NMUR2Q9GZQ4 415 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 ABHD16BQ9H3Z7 469 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 KIAA1257Q9ULG3 409 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 SORCS3Q9UPU3 1222 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 EFR3BQ9Y2G0 817 aa11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.21□□□□□ -0.62
CHRNA1-201ENST00000261007 ZNF236Q9UL36 1845 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 A0A087WZ62 844 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 H3BRB1 525 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 RNASEH1O60930 286 aaKnown RBP11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 ASLP04424 464 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 CFHP08603 1231 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 KRT19P08727 400 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 ZSCAN5DPP0CG00 497 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 SETSIPP0DME0 302 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 UQCRBP14927 111 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 VAV1P15498 845 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 MAGEA8P43361 318 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 IGBP1P78318 339 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 GRB14Q14449 540 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 MYBPC3Q14896 1274 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 STILQ15468 1287 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 AMHR2Q16671 573 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 DUSP28Q4G0W2 176 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 TMEM259Q4ZIN3 620 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 HP1BP3Q5SSJ5 553 aaPredicted RBP11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 DPP9Q86TI2 863 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 TRIM74Q86UV6 250 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 TRIM73Q86UV7 250 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 RBM15BQ8NDT2 890 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms