RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 GEMIN4P57678 1058 aaKnown RBP11.23□□□□□ -0.61
URB2-201ENST00000258243 RHOAP61586 193 aa11.23□□□□□ -0.61
URB2-201ENST00000258243 LRRC8EQ6NSJ5 796 aa11.23□□□□□ -0.61
URB2-201ENST00000258243 VSIG10LQ86VR7 867 aa11.23□□□□□ -0.61
URB2-201ENST00000258243 UPF1Q92900 1129 aaKnown RBP eCLIP11.23□□□□□ -0.61
URB2-201ENST00000258243 SLC13A1Q9BZW2 595 aa11.23□□□□□ -0.61
URB2-201ENST00000258243 MRGBPQ9NV56 204 aa11.23□□□□□ -0.61
URB2-201ENST00000258243 VPS9D1Q9Y2B5 631 aa11.23□□□□□ -0.61
URB2-201ENST00000258243 SNCAIPQ9Y6H5 919 aa11.23□□□□□ -0.61
URB2-201ENST00000258243 COL14A1Q05707 1796 aaKnown RBP11.23□□□□□ -0.61
URB2-201ENST00000258243 SLIT3O75094 1523 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 TMEM120BA0PK00 339 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 DLGAP3O95886 979 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 PTK6Q13882 451 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 OSBPL8Q9BZF1 889 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 ELOVL4Q9GZR5 314 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 ALG13Q9NP73 1137 aaKnown RBP11.22□□□□□ -0.61
URB2-201ENST00000258243 C20orf96Q9NUD7 363 aaPredicted RBP11.22□□□□□ -0.61
URB2-201ENST00000258243 RAB21Q9UL25 225 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 BARX2Q9UMQ3 279 aaPredicted RBP11.22□□□□□ -0.61
URB2-201ENST00000258243 CST8O60676 142 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 DDHD2O94830 711 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 VCPP55072 806 aaKnown RBP11.22□□□□□ -0.61
URB2-201ENST00000258243 PTPN11Q06124 597 aaPredicted RBP11.22□□□□□ -0.61
URB2-201ENST00000258243 FOXD4Q12950 439 aaPredicted RBP11.22□□□□□ -0.61
URB2-201ENST00000258243 EIF2B5Q13144 721 aaKnown RBP11.22□□□□□ -0.61
URB2-201ENST00000258243 ZNF284Q2VY69 593 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 PAPD7Q5XG87 772 aaKnown RBP11.22□□□□□ -0.61
URB2-201ENST00000258243 C3orf20Q8ND61 904 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 PGLYRP2Q96PD5 576 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 POP1Q99575 1024 aaKnown RBP11.22□□□□□ -0.61
URB2-201ENST00000258243 CISHQ9NSE2 258 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 PKD2L2Q9NZM6 624 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 ZC3H7BQ9UGR2 993 aaKnown RBP11.22□□□□□ -0.61
URB2-201ENST00000258243 CLASP2O75122 1294 aaKnown RBP11.22□□□□□ -0.61
URB2-201ENST00000258243 PDE9AO76083 593 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 ELNP15502 786 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 CD44P16070 742 aaKnown RBP11.22□□□□□ -0.61
URB2-201ENST00000258243 COMTP21964 271 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 PRMT2P55345 433 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 PCBP1Q15365 356 aaKnown RBP eCLIP11.22□□□□□ -0.61
URB2-201ENST00000258243 SLC39A12Q504Y0 691 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 DMGDHQ9UI17 866 aaKnown RBP11.22□□□□□ -0.61
URB2-201ENST00000258243 HPSEQ9Y251 543 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 DUSP10Q9Y6W6 482 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 LACTBL1A8MY62 500 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 IDH3BO43837 385 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 CDH16O75309 829 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 GUCY1B2O75343 617 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 SGPL1O95470 568 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 PLEKP08567 350 aaPredicted RBP11.22□□□□□ -0.61
URB2-201ENST00000258243 TBL3Q12788 808 aaKnown RBP11.22□□□□□ -0.61
URB2-201ENST00000258243 JAMLQ86YT9 394 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 LRRC34Q8IZ02 419 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 DLGAP2Q9P1A6 1054 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 HEATR9A2RTY3 570 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 KLHL18O94889 574 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 PON1P27169 355 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 USP10Q14694 798 aaKnown RBP11.22□□□□□ -0.61
URB2-201ENST00000258243 SPDYE7PQ495Y7 208 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 RARS2Q5T160 578 aaKnown RBP11.22□□□□□ -0.61
URB2-201ENST00000258243 TMEM86AQ8N2M4 240 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 ARL10Q8N8L6 244 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 DNAJC7Q99615 494 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 OSBPL10Q9BXB5 764 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 NFKBIZQ9BYH8 718 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 DMAP1Q9NPF5 467 aaPredicted RBP11.22□□□□□ -0.61
URB2-201ENST00000258243 INTS13Q9NVM9 706 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 CD274Q9NZQ7 290 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 NCKAP1Q9Y2A7 1128 aa11.22□□□□□ -0.61
URB2-201ENST00000258243 EIF2S1P05198 315 aaKnown RBP11.21□□□□□ -0.61
URB2-201ENST00000258243 MSR1P21757 451 aa11.21□□□□□ -0.61
URB2-201ENST00000258243 EIF2S3P41091 472 aaKnown RBP11.21□□□□□ -0.61
URB2-201ENST00000258243 PTGER2P43116 358 aa11.21□□□□□ -0.61
URB2-201ENST00000258243 PDK2Q15119 407 aa11.21□□□□□ -0.61
URB2-201ENST00000258243 KIRREL3Q8IZU9 778 aa11.21□□□□□ -0.61
URB2-201ENST00000258243 B3GALT6Q96L58 329 aa11.21□□□□□ -0.61
URB2-201ENST00000258243 GOLPH3Q9H4A6 298 aa11.21□□□□□ -0.61
URB2-201ENST00000258243 A0A0B4J269 797 aa11.21□□□□□ -0.61
URB2-201ENST00000258243 WTIPA6NIX2 430 aaPredicted RBP11.21□□□□□ -0.61
URB2-201ENST00000258243 SMAPO00193 183 aa11.21□□□□□ -0.61
URB2-201ENST00000258243 LSM8O95777 96 aaKnown RBP11.21□□□□□ -0.61
URB2-201ENST00000258243 POLBP06746 335 aa11.21□□□□□ -0.61
URB2-201ENST00000258243 PPP3CCP48454 512 aa11.21□□□□□ -0.61
URB2-201ENST00000258243 TUBB3Q13509 450 aa11.21□□□□□ -0.61
URB2-201ENST00000258243 UGT3A1Q6NUS8 523 aa11.21□□□□□ -0.61
URB2-201ENST00000258243 PLPPR4Q7Z2D5 763 aa11.21□□□□□ -0.61
URB2-201ENST00000258243 KRT77Q7Z794 578 aa11.21□□□□□ -0.61
URB2-201ENST00000258243 RASSF5Q8WWW0 418 aa11.21□□□□□ -0.61
URB2-201ENST00000258243 HIC2Q96JB3 615 aa11.21□□□□□ -0.61
URB2-201ENST00000258243 NPHS2Q9NP85 383 aa11.21□□□□□ -0.61
URB2-201ENST00000258243 CA12O43570 354 aa11.21□□□□□ -0.62
URB2-201ENST00000258243 CCDC22O60826 627 aa11.21□□□□□ -0.62
URB2-201ENST00000258243 USP2O75604 605 aaPredicted RBP11.21□□□□□ -0.62
URB2-201ENST00000258243 PCDH8O95206 1070 aa11.21□□□□□ -0.62
URB2-201ENST00000258243 PPM1AP35813 382 aa11.21□□□□□ -0.62
URB2-201ENST00000258243 FDFT1P37268 417 aa11.21□□□□□ -0.62
URB2-201ENST00000258243 TBX4P57082 545 aa11.21□□□□□ -0.62
URB2-201ENST00000258243 MTFR1Q15390 333 aa11.21□□□□□ -0.62
URB2-201ENST00000258243 PABPC1LQ4VXU2 614 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms