RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 ASCC1Q8N9N2 400 aaKnown RBP13.26□□□□□ -0.29
VAMP4-201ENST00000236192 ETNPPLQ8TBG4 499 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 VPS33AQ96AX1 596 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 MTERF3Q96E29 417 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 PRICKLE1Q96MT3 831 aaPredicted RBP13.26□□□□□ -0.29
VAMP4-201ENST00000236192 TCF12Q99081 682 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 SPHKAPQ2M3C7 1700 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 CCDC182A6NF36 153 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 BST1Q10588 318 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 TSC22D1Q15714 1073 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 AADACL2Q6P093 401 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 MARVELD2Q8N4S9 558 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 POMGNT1Q8WZA1 660 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 SLC5A5Q92911 643 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 FRMD8P1Q9BZ68 369 aaPredicted RBP13.26□□□□□ -0.29
VAMP4-201ENST00000236192 GZMAP12544 262 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 KPNA1P52294 538 aaPredicted RBP13.25□□□□□ -0.29
VAMP4-201ENST00000236192 RPL10AP62906 217 aaKnown RBP13.25□□□□□ -0.29
VAMP4-201ENST00000236192 TAP1Q03518 808 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 TAF12Q16514 161 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 ERVK-5Q9HDB9 667 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 NRKQ7Z2Y5 1582 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 PRAMEF22A3QJZ6 481 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 PLIN5Q00G26 463 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 GNA12Q03113 381 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.25□□□□□ -0.29
VAMP4-201ENST00000236192 MSLNQ13421 630 aaPredicted RBP13.25□□□□□ -0.29
VAMP4-201ENST00000236192 FAM102BQ5T8I3 360 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 CRTC3Q6UUV7 619 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 ADGRG6Q86SQ4 1221 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 ZNF410Q86VK4 478 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 NACC1Q96RE7 527 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 EMILIN2Q9BXX0 1053 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 ZNF717Q9BY31 904 aaPredicted RBP13.25□□□□□ -0.29
VAMP4-201ENST00000236192 TRIM45Q9H8W5 580 aaPredicted RBP13.25□□□□□ -0.29
VAMP4-201ENST00000236192 GGA1Q9UJY5 639 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 TRIM38O00635 465 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 MAGEB2O15479 319 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 TCEA1P23193 301 aaKnown RBP13.25□□□□□ -0.29
VAMP4-201ENST00000236192 EIF6P56537 245 aaKnown RBP13.25□□□□□ -0.29
VAMP4-201ENST00000236192 NME5P56597 212 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 PICALMQ13492 652 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 RABL6Q3YEC7 729 aaPredicted RBP13.25□□□□□ -0.29
VAMP4-201ENST00000236192 IFNEQ86WN2 208 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 ENKURQ8TC29 256 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 KCTD4Q8WVF5 259 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 FAM136AQ96C01 138 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 MRPL39Q9NYK5 338 aaKnown RBP13.25□□□□□ -0.29
VAMP4-201ENST00000236192 EFCAB6Q5THR3 1501 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 TCEA3O75764 348 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 FBXO21O94952 628 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 KRT19P08727 400 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 BCAMP50895 628 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 CSE1LP55060 971 aaKnown RBP13.25□□□□□ -0.29
VAMP4-201ENST00000236192 TIGD2Q4W5G0 525 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 HGSNATQ68CP4 663 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 GATAD2AQ86YP4 633 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 BDH2Q9BUT1 245 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 ZNF696Q9H7X3 374 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 FKBP14Q9NWM8 211 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 GDAP2Q9NXN4 497 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 PKD2L1Q9P0L9 805 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 PMF1-BGLAPU3KQ54 211 aa13.25□□□□□ -0.29
VAMP4-201ENST00000236192 PLEKHG3A1L390 1219 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 IFNA16P05015 189 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 C12orf56Q8IXR9 622 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 XXYLT1Q8NBI6 393 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 OR7G1Q8NGA0 311 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 PNPT1Q8TCS8 783 aaKnown RBP13.24□□□□□ -0.29
VAMP4-201ENST00000236192 OR2B2Q9GZK3 357 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 PLEKHA5Q9HAU0 1116 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 ZNF224Q9NZL3 707 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 MLH3Q9UHC1 1453 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 A0A1W2PPM1 405 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 SSTR1P30872 391 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 UBE3AQ05086 875 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 GRM4Q14833 912 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 DENND5AQ6IQ26 1287 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 ZCCHC8Q6NZY4 707 aaKnown RBP13.24□□□□□ -0.29
VAMP4-201ENST00000236192 ARCQ7LC44 396 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 LRRC57Q8N9N7 239 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 SLC7A6OSQ96CW6 309 aaPredicted RBP13.24□□□□□ -0.29
VAMP4-201ENST00000236192 MED15Q96RN5 788 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 SLC4A5Q9BY07 1137 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 KIAA1210Q9ULL0 1709 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 FOXO6A8MYZ6 492 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 DDX3YO15523 660 aaKnown RBP13.24□□□□□ -0.29
VAMP4-201ENST00000236192 FOSL1P15407 271 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 FAAP100Q0VG06 881 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 KCTD19Q17RG1 926 aaPredicted RBP13.24□□□□□ -0.29
VAMP4-201ENST00000236192 PABPC1LQ4VXU2 614 aaKnown RBP13.24□□□□□ -0.29
VAMP4-201ENST00000236192 ASPRV1Q53RT3 343 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 ARMC8Q8IUR7 673 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 C8orf59Q8N0T1 100 aaPredicted RBP13.24□□□□□ -0.29
VAMP4-201ENST00000236192 ZBTB38Q8NAP3 1195 aaPredicted RBP13.24□□□□□ -0.29
VAMP4-201ENST00000236192 ZNF420Q8TAQ5 688 aaPredicted RBP13.24□□□□□ -0.29
VAMP4-201ENST00000236192 NLRP4Q96MN2 994 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 OCEL1Q9H607 264 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 RAB6BQ9NRW1 208 aa13.24□□□□□ -0.29
VAMP4-201ENST00000236192 CHST7Q9NS84 486 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms