RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 GRIK3Q13003 919 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 CCDC6Q16204 474 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 CA9Q16790 459 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 MUM1Q2TAK8 710 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 ANGEL2Q5VTE6 544 aaKnown RBP14.37□□□□□ -0.11
PHGDH-233ENST00000642021 NAIF1Q69YI7 327 aaPredicted RBP14.37□□□□□ -0.11
PHGDH-233ENST00000642021 JADE1Q6IE81 842 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 TRMT10BQ6PF06 316 aaKnown RBP14.37□□□□□ -0.11
PHGDH-233ENST00000642021 CHST13Q8NET6 341 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 UCMAQ8WVF2 138 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 FAM136AQ96C01 138 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 RPF1Q9H9Y2 349 aaKnown RBP14.37□□□□□ -0.11
PHGDH-233ENST00000642021 STOML1Q9UBI4 398 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 MARCOQ9UEW3 520 aaPredicted RBP14.37□□□□□ -0.11
PHGDH-233ENST00000642021 CCDC195A0A1B0GUA6 201 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 KLF11O14901 512 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 PSMG1O95456 288 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 LMNAP02545 664 aaKnown RBP14.37□□□□□ -0.11
PHGDH-233ENST00000642021 CSH1P0DML2 217 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 CSH2P0DML3 217 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 KITP10721 976 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 GPD1P21695 349 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 AMPD1P23109 780 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 ACAP1Q15027 740 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 C11orf91Q3C1V1 193 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 OR6B2Q6IFH4 312 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 SCYL2Q6P3W7 929 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 FAM183BPQ6ZVS7 135 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 ARID3BQ8IVW6 561 aaPredicted RBP14.37□□□□□ -0.11
PHGDH-233ENST00000642021 CCDC33Q8N5R6 958 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 C12orf29Q8N999 325 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 CCDC110Q8TBZ0 833 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 SCG3Q8WXD2 468 aaKnown RBP14.37□□□□□ -0.11
PHGDH-233ENST00000642021 CNPY3Q9BT09 278 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 MAGEB5Q9BZ81 275 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 YIPF3Q9GZM5 350 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 SPDYE5A6NIY4 337 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 NFKBIEO00221 500 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 SNRPAP09012 282 aaKnown RBP14.36□□□□□ -0.11
PHGDH-233ENST00000642021 RXRBP28702 533 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 VHLP40337 213 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 CCDC14Q49A88 953 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 CMPK2Q5EBM0 449 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 MPP5Q8N3R9 675 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 PCDH19Q8TAB3 1148 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 ACAP3Q96P50 834 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 CAMKK2Q96RR4 588 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 PPP1R16BQ96T49 567 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 GPR20Q99678 358 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 IQCGQ9H095 443 aaKnown RBP14.36□□□□□ -0.11
PHGDH-233ENST00000642021 PAK5Q9P286 719 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 MGAMO43451 1857 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 DOCK1Q14185 1865 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 SLC15A5A6NIM6 579 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 CAPN14A8MX76 684 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 B2RBV5 119 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 KIF3CO14782 793 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 IL1BP01584 269 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 RGS7P49802 495 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 TMPRSS15P98073 1019 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 CCDC62Q6P9F0 684 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 LBX2Q6XYB7 198 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.36□□□□□ -0.11
PHGDH-233ENST00000642021 ETNK2Q9NVF9 386 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 WASF2Q9Y6W5 498 aa14.36□□□□□ -0.11
PHGDH-233ENST00000642021 H3BRJ5 948 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 PRPSAP2O60256 369 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 SPAG6O75602 509 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 ENO1P06733 434 aaKnown RBP14.35□□□□□ -0.11
PHGDH-233ENST00000642021 PFKMP08237 780 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 STAG3L1P0CL83 205 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 PRKCHP24723 683 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 PGM1P36871 562 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 GRIA1P42261 906 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 MBTD1Q05BQ5 628 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 THOC5Q13769 683 aaKnown RBP14.35□□□□□ -0.11
PHGDH-233ENST00000642021 TFDP2Q14188 446 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 CHI3L2Q15782 390 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 TSNAXIP1Q2TAA8 658 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 DLK2Q6UY11 383 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 UNC5AQ6ZN44 842 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 LMNTD2Q8IXW0 634 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 E2F7Q96AV8 911 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 CLPTM1LQ96KA5 538 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 ENO4A6NNW6 628 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 KRT37O76014 449 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 METTL18O95568 372 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 OSBPP22059 807 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 NDST1P52848 882 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 BCAR1P56945 870 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 OCRLQ01968 901 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 SLC34A1Q06495 639 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 KRT81Q14533 505 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 FAM47CQ5HY64 1035 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 MROH9Q5TGP6 573 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 ZNF534Q76KX8 674 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 NCAPG2Q86XI2 1143 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 RBM15BQ8NDT2 890 aaKnown RBP14.35□□□□□ -0.11
PHGDH-233ENST00000642021 COPS5Q92905 334 aa14.35□□□□□ -0.11
PHGDH-233ENST00000642021 C2orf40Q9H1Z8 148 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms