RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 DEFB106AQ8N104 65 aa16.03■□□□□ 0.16
CLN6-219ENST00000637329 ARHGAP18Q8N392 663 aa16.03■□□□□ 0.16
CLN6-219ENST00000637329 C12orf50Q8NA57 414 aaPredicted RBP16.03■□□□□ 0.16
CLN6-219ENST00000637329 PGAP3Q96FM1 320 aaPredicted RBP16.03■□□□□ 0.16
CLN6-219ENST00000637329 NPY6RQ99463 290 aa16.03■□□□□ 0.16
CLN6-219ENST00000637329 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.03■□□□□ 0.16
CLN6-219ENST00000637329 V9GYY5 206 aaPredicted RBP16.03■□□□□ 0.16
CLN6-219ENST00000637329 LAMA2P24043 3122 aaKnown RBP16.02■□□□□ 0.16
CLN6-219ENST00000637329 MYO16Q9Y6X6 1858 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 FAM92AA1XBS5 289 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 WDR27A2RRH5 827 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 YJEFN3A6XGL0 299 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 E7ENQ6 273 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 TNFRSF10AO00220 468 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 CAPN9O14815 690 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 PHF2O75151 1096 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 USP17L7P0C7H9 530 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 HAPLN1P10915 354 aaPredicted RBP16.02■□□□□ 0.16
CLN6-219ENST00000637329 ATP2A2P16615 1042 aaKnown RBP16.02■□□□□ 0.16
CLN6-219ENST00000637329 MCM3P25205 808 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 IL1R2P27930 398 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 RDXP35241 583 aaKnown RBP16.02■□□□□ 0.16
CLN6-219ENST00000637329 PLA2G5P39877 138 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 ATP11AP98196 1134 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 KLF1Q13351 362 aaPredicted RBP16.02■□□□□ 0.16
CLN6-219ENST00000637329 TAZQ16635 292 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 CYP1B1Q16678 543 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 CDO1Q16878 200 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 DCAF6Q58WW2 860 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 TFDP3Q5H9I0 405 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 RSPO2Q6UXX9 243 aaPredicted RBP16.02■□□□□ 0.16
CLN6-219ENST00000637329 SPOCD1Q6ZMY3 1216 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 RNF19BQ6ZMZ0 732 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 NUP93Q8N1F7 819 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 CMASQ8NFW8 434 aaPredicted RBP16.02■□□□□ 0.16
CLN6-219ENST00000637329 PEBP4Q96S96 227 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 CDX2Q99626 313 aaPredicted RBP16.02■□□□□ 0.16
CLN6-219ENST00000637329 OSBPL8Q9BZF1 889 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 HOMER3Q9NSC5 361 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 IL37Q9NZH6 218 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 CXXC1Q9P0U4 656 aaPredicted RBP16.02■□□□□ 0.16
CLN6-219ENST00000637329 FNIP2Q9P278 1114 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 AFF4Q9UHB7 1163 aaKnown RBP16.02■□□□□ 0.16
CLN6-219ENST00000637329 SCML2Q9UQR0 700 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 LZTS1Q9Y250 596 aa16.02■□□□□ 0.16
CLN6-219ENST00000637329 hCG_1818297A0A087WSY0 165 aa16.01■□□□□ 0.15
CLN6-219ENST00000637329 LRRD1A4D1F6 860 aa16.01■□□□□ 0.15
CLN6-219ENST00000637329 FGF18O76093 207 aa16.01■□□□□ 0.15
CLN6-219ENST00000637329 VNN2O95498 520 aa16.01■□□□□ 0.15
CLN6-219ENST00000637329 RARAP10276 462 aa16.01■□□□□ 0.15
CLN6-219ENST00000637329 CHRNA3P32297 505 aa16.01■□□□□ 0.15
CLN6-219ENST00000637329 CDKN2BP42772 138 aa16.01■□□□□ 0.15
CLN6-219ENST00000637329 FNTAP49354 379 aa16.01■□□□□ 0.15
CLN6-219ENST00000637329 TUFMP49411 452 aaKnown RBP16.01■□□□□ 0.15
CLN6-219ENST00000637329 ARPP19P56211 112 aa16.01■□□□□ 0.15
CLN6-219ENST00000637329 PDK2Q15119 407 aa16.01■□□□□ 0.15
CLN6-219ENST00000637329 ZFYVE27Q5T4F4 411 aa16.01■□□□□ 0.15
CLN6-219ENST00000637329 OTUD1Q5VV17 481 aaPredicted RBP16.01■□□□□ 0.15
CLN6-219ENST00000637329 TXNRD3NBQ6F5E7 133 aa16.01■□□□□ 0.15
CLN6-219ENST00000637329 AADACL2Q6P093 401 aa16.01■□□□□ 0.15
CLN6-219ENST00000637329 MAP7D3Q8IWC1 876 aa16.01■□□□□ 0.15
CLN6-219ENST00000637329 ATAD1Q8NBU5 361 aa16.01■□□□□ 0.15
CLN6-219ENST00000637329 PGLYRP2Q96PD5 576 aa16.01■□□□□ 0.15
CLN6-219ENST00000637329 ZBP1Q9H171 429 aa16.01■□□□□ 0.15
CLN6-219ENST00000637329 ANKZF1Q9H8Y5 726 aa16.01■□□□□ 0.15
CLN6-219ENST00000637329 ZWILCHQ9H900 591 aa16.01■□□□□ 0.15
CLN6-219ENST00000637329 MRPL17Q9NRX2 175 aaKnown RBP16.01■□□□□ 0.15
CLN6-219ENST00000637329 ABCC13Q9NSE7 274 aa16.01■□□□□ 0.15
CLN6-219ENST00000637329 C3orf70A6NLC5 250 aaPredicted RBP16■□□□□ 0.15
CLN6-219ENST00000637329 TLL1O43897 1013 aa16■□□□□ 0.15
CLN6-219ENST00000637329 ABLIM3O94929 683 aa16■□□□□ 0.15
CLN6-219ENST00000637329 TJP3O95049 919 aa16■□□□□ 0.15
CLN6-219ENST00000637329 F9P00740 461 aa16■□□□□ 0.15
CLN6-219ENST00000637329 RALAP11233 206 aa16■□□□□ 0.15
CLN6-219ENST00000637329 NCAM1P13591 858 aa16■□□□□ 0.15
CLN6-219ENST00000637329 OR1D2P34982 312 aa16■□□□□ 0.15
CLN6-219ENST00000637329 PSEN1P49768 467 aa16■□□□□ 0.15
CLN6-219ENST00000637329 YWHAGP61981 247 aaKnown RBP eCLIP16■□□□□ 0.15
CLN6-219ENST00000637329 RAB33AQ14088 237 aa16■□□□□ 0.15
CLN6-219ENST00000637329 DHX34Q14147 1143 aaKnown RBP16■□□□□ 0.15
CLN6-219ENST00000637329 SIX1Q15475 284 aaPredicted RBP16■□□□□ 0.15
CLN6-219ENST00000637329 SMTNL2Q2TAL5 461 aa16■□□□□ 0.15
CLN6-219ENST00000637329 MGAT5BQ3V5L5 792 aa16■□□□□ 0.15
CLN6-219ENST00000637329 SH3PXD2AQ5TCZ1 1133 aa16■□□□□ 0.15
CLN6-219ENST00000637329 WDR93Q6P2C0 686 aa16■□□□□ 0.15
CLN6-219ENST00000637329 MFSD7Q6UXD7 560 aa16■□□□□ 0.15
CLN6-219ENST00000637329 DENND5BQ6ZUT9 1274 aa16■□□□□ 0.15
CLN6-219ENST00000637329 HFE2Q6ZVN8 426 aa16■□□□□ 0.15
CLN6-219ENST00000637329 VPS52Q8N1B4 723 aa16■□□□□ 0.15
CLN6-219ENST00000637329 CCDC26Q8TAB7 109 aa16■□□□□ 0.15
CLN6-219ENST00000637329 FAM71BQ8TC56 605 aa16■□□□□ 0.15
CLN6-219ENST00000637329 NTAN1Q96AB6 310 aa16■□□□□ 0.15
CLN6-219ENST00000637329 SEPT5Q99719 369 aaPredicted RBP16■□□□□ 0.15
CLN6-219ENST00000637329 CLSTN3Q9BQT9 956 aa16■□□□□ 0.15
CLN6-219ENST00000637329 SNRNP25Q9BV90 132 aaKnown RBP16■□□□□ 0.15
CLN6-219ENST00000637329 TTLL2Q9BWV7 592 aa16■□□□□ 0.15
CLN6-219ENST00000637329 AP1M1Q9BXS5 423 aa16■□□□□ 0.15
CLN6-219ENST00000637329 FRMD8P1Q9BZ68 369 aaPredicted RBP16■□□□□ 0.15
CLN6-219ENST00000637329 STAU2Q9NUL3 570 aaKnown RBP eCLIP16■□□□□ 0.15
CLN6-219ENST00000637329 KLHL11Q9NVR0 708 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms