RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 CYP2W1Q8TAV3 490 aa4□□□□□ -1.77
VBP1-204ENST00000625964 REPS1Q96D71 796 aa4□□□□□ -1.77
VBP1-204ENST00000625964 IQCDQ96DY2 449 aa4□□□□□ -1.77
VBP1-204ENST00000625964 LENG8Q96PV6 779 aaPredicted RBP4□□□□□ -1.77
VBP1-204ENST00000625964 PRSS22Q9GZN4 317 aa4□□□□□ -1.77
VBP1-204ENST00000625964 FAM83DQ9H4H8 585 aa4□□□□□ -1.77
VBP1-204ENST00000625964 THAP12O43422 761 aa3.99□□□□□ -1.77
VBP1-204ENST00000625964 MYL3P08590 195 aa3.99□□□□□ -1.77
VBP1-204ENST00000625964 CYP2D6P10635 497 aa3.99□□□□□ -1.77
VBP1-204ENST00000625964 SLC5A1P13866 664 aa3.99□□□□□ -1.77
VBP1-204ENST00000625964 FPR3P25089 353 aa3.99□□□□□ -1.77
VBP1-204ENST00000625964 MT3P25713 68 aa3.99□□□□□ -1.77
VBP1-204ENST00000625964 GKP32189 559 aa3.99□□□□□ -1.77
VBP1-204ENST00000625964 GATMP50440 423 aa3.99□□□□□ -1.77
VBP1-204ENST00000625964 HTRA4P83105 476 aaPredicted RBP3.99□□□□□ -1.77
VBP1-204ENST00000625964 TIAL1Q01085 375 aaKnown RBP eCLIP3.99□□□□□ -1.77
VBP1-204ENST00000625964 ZNF543Q08ER8 600 aa3.99□□□□□ -1.77
VBP1-204ENST00000625964 IFIT5Q13325 482 aaKnown RBP3.99□□□□□ -1.77
VBP1-204ENST00000625964 HLTFQ14527 1009 aaKnown RBP eCLIP3.99□□□□□ -1.77
VBP1-204ENST00000625964 KLHDC7AQ5VTJ3 777 aa3.99□□□□□ -1.77
VBP1-204ENST00000625964 MTHFD1LQ6UB35 978 aa3.99□□□□□ -1.77
VBP1-204ENST00000625964 TRIM72Q6ZMU5 477 aa3.99□□□□□ -1.77
VBP1-204ENST00000625964 RAB11FIP4Q86YS3 637 aa3.99□□□□□ -1.77
VBP1-204ENST00000625964 ZBTB8BQ8NAP8 495 aaPredicted RBP3.99□□□□□ -1.77
VBP1-204ENST00000625964 RSPRY1Q96DX4 576 aa3.99□□□□□ -1.77
VBP1-204ENST00000625964 DAZAP1Q96EP5 407 aaKnown RBP3.99□□□□□ -1.77
VBP1-204ENST00000625964 ZNF668Q96K58 619 aaPredicted RBP3.99□□□□□ -1.77
VBP1-204ENST00000625964 TBCBQ99426 244 aa3.99□□□□□ -1.77
VBP1-204ENST00000625964 CIPCQ9C0C6 399 aa3.99□□□□□ -1.77
VBP1-204ENST00000625964 GEMIN8Q9NWZ8 242 aaKnown RBP3.99□□□□□ -1.77
VBP1-204ENST00000625964 DKK4Q9UBT3 224 aa3.99□□□□□ -1.77
VBP1-204ENST00000625964 AMFRQ9UKV5 643 aa3.99□□□□□ -1.77
VBP1-204ENST00000625964 SOCS2O14508 198 aa3.98□□□□□ -1.77
VBP1-204ENST00000625964 PRC1O43663 620 aa3.98□□□□□ -1.77
VBP1-204ENST00000625964 PMPCBO75439 489 aa3.98□□□□□ -1.77
VBP1-204ENST00000625964 KRT18P05783 430 aaKnown RBP3.98□□□□□ -1.77
VBP1-204ENST00000625964 YY1P25490 414 aa3.98□□□□□ -1.77
VBP1-204ENST00000625964 NTSR1P30989 418 aa3.98□□□□□ -1.77
VBP1-204ENST00000625964 PRIM2P49643 509 aa3.98□□□□□ -1.77
VBP1-204ENST00000625964 TIRAPP58753 221 aa3.98□□□□□ -1.77
VBP1-204ENST00000625964 HOXA4Q00056 320 aaPredicted RBP3.98□□□□□ -1.77
VBP1-204ENST00000625964 SLC2A7Q6PXP3 512 aa3.98□□□□□ -1.77
VBP1-204ENST00000625964 KIRREL2Q6UWL6 708 aa3.98□□□□□ -1.77
VBP1-204ENST00000625964 TERB1Q8NA31 727 aa3.98□□□□□ -1.77
VBP1-204ENST00000625964 ATP11CQ8NB49 1132 aa3.98□□□□□ -1.77
VBP1-204ENST00000625964 PJA1Q8NG27 643 aa3.98□□□□□ -1.77
VBP1-204ENST00000625964 LRRC46Q96FV0 321 aa3.98□□□□□ -1.77
VBP1-204ENST00000625964 MMS19Q96T76 1030 aa3.98□□□□□ -1.77
VBP1-204ENST00000625964 HEYLQ9NQ87 328 aaPredicted RBP3.98□□□□□ -1.77
VBP1-204ENST00000625964 DNAJB11Q9UBS4 358 aa3.98□□□□□ -1.77
VBP1-204ENST00000625964 LPAR3Q9UBY5 353 aa3.98□□□□□ -1.77
VBP1-204ENST00000625964 RGS17Q9UGC6 210 aaPredicted RBP3.98□□□□□ -1.77
VBP1-204ENST00000625964 HPSEQ9Y251 543 aa3.98□□□□□ -1.77
VBP1-204ENST00000625964 CYP2D7A0A087X1C5 515 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 AGPSO00116 658 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 EXOC5O00471 708 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 SNX2O60749 519 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 CAND2O75155 1236 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 A1BGP04217 495 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 NBPF7P0C2Y1 421 aaPredicted RBP3.97□□□□□ -1.77
VBP1-204ENST00000625964 MYCLP12524 364 aaPredicted RBP3.97□□□□□ -1.77
VBP1-204ENST00000625964 CREB1P16220 341 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 TSHRP16473 764 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 SFPQP23246 707 aaKnown RBP eCLIP3.97□□□□□ -1.77
VBP1-204ENST00000625964 STT3AP46977 705 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 CASP5P51878 434 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 PSG6Q00889 435 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 RABEP1Q15276 862 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 PRAMEF17Q5VTA0 474 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 MZT2AQ6P582 158 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 SERPINA13PQ6UXR4 307 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 PTCHD4Q6ZW05 846 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 MRPL10Q7Z7H8 261 aaKnown RBP3.97□□□□□ -1.77
VBP1-204ENST00000625964 C11orf44Q8N8P7 122 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 PNLDC1Q8NA58 520 aaKnown RBP3.97□□□□□ -1.77
VBP1-204ENST00000625964 HIST1H2AAQ96QV6 131 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 THAP7Q9BT49 309 aaPredicted RBP3.97□□□□□ -1.77
VBP1-204ENST00000625964 AS3MTQ9HBK9 375 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 SNX15Q9NRS6 342 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 TFCP2L1Q9NZI6 479 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 RIMKLBQ9ULI2 386 aa3.97□□□□□ -1.77
VBP1-204ENST00000625964 FAM90A10PA6NDY2 464 aa3.96□□□□□ -1.78
VBP1-204ENST00000625964 SPRY2O43597 315 aa3.96□□□□□ -1.78
VBP1-204ENST00000625964 FGAP02671 866 aa3.96□□□□□ -1.78
VBP1-204ENST00000625964 NHLRC4P0CG21 123 aaPredicted RBP3.96□□□□□ -1.78
VBP1-204ENST00000625964 PHKG2P15735 406 aa3.96□□□□□ -1.78
VBP1-204ENST00000625964 RBL1P28749 1068 aa3.96□□□□□ -1.78
VBP1-204ENST00000625964 RENBPP51606 427 aa3.96□□□□□ -1.78
VBP1-204ENST00000625964 ALDH5A1P51649 535 aaPredicted RBP3.96□□□□□ -1.78
VBP1-204ENST00000625964 TBX4P57082 545 aa3.96□□□□□ -1.78
VBP1-204ENST00000625964 LINC00205P59089 165 aa3.96□□□□□ -1.78
VBP1-204ENST00000625964 HYAL1Q12794 435 aa3.96□□□□□ -1.78
VBP1-204ENST00000625964 LONRF1Q17RB8 773 aa3.96□□□□□ -1.78
VBP1-204ENST00000625964 RNASE12Q5GAN4 147 aaKnown RBP3.96□□□□□ -1.78
VBP1-204ENST00000625964 MANEALQ5VSG8 457 aa3.96□□□□□ -1.78
VBP1-204ENST00000625964 DENND2CQ68D51 928 aa3.96□□□□□ -1.78
VBP1-204ENST00000625964 CLEC9AQ6UXN8 241 aa3.96□□□□□ -1.78
VBP1-204ENST00000625964 GALNT16Q8N428 558 aa3.96□□□□□ -1.78
VBP1-204ENST00000625964 PIGOQ8TEQ8 1089 aa3.96□□□□□ -1.78
VBP1-204ENST00000625964 WDYHV1Q96HA8 205 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms