RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 MCM4P33991 863 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 ZNF132P52740 706 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 COPB1P53618 953 aaKnown RBP6.93□□□□□ -1.3
CDKL5-204ENST00000623364 HAND2P61296 217 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 GAD2Q05329 585 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 FOXD4Q12950 439 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-204ENST00000623364 FGL2Q14314 439 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 KCNB1Q14721 858 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 NR6A1Q15406 480 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 BMT2Q1RMZ1 405 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 SLC45A4Q5BKX6 768 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 VWA2Q5GFL6 755 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 GLRA4Q5JXX5 417 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 IFIT1BQ5T764 474 aaKnown RBP6.93□□□□□ -1.3
CDKL5-204ENST00000623364 ZNF295-AS1Q8N0V1 137 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 NAT16Q8N8M0 369 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 GPBAR1Q8TDU6 330 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 TMEM143Q96AN5 459 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 RNF25Q96BH1 459 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-204ENST00000623364 FUBP3Q96I24 572 aaKnown RBP eCLIP6.93□□□□□ -1.3
CDKL5-204ENST00000623364 SLC22A12Q96S37 553 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 ORAI3Q9BRQ5 295 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 STRADBQ9C0K7 418 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 PREBQ9HCU5 417 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 CYLDQ9NQC7 956 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 PISDQ9UG56 409 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 SEC63Q9UGP8 760 aaKnown RBP6.93□□□□□ -1.3
CDKL5-204ENST00000623364 ARHGAP26Q9UNA1 814 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 ZNF469Q96JG9 3925 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-204ENST00000623364 STK36Q9NRP7 1315 aa6.93□□□□□ -1.3
CDKL5-204ENST00000623364 MEGF8Q7Z7M0 2845 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 RP1P56715 2156 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 OBSL1O75147 1896 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 A0A1W2PPC4 97 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 ANKUB1A6NFN9 424 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 WASH3PC4AMC7 463 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 TMX2-CTNND1H3BSU7 103 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 TLR4O00206 839 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 CAPN5O15484 640 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-204ENST00000623364 B4GALT5O43286 388 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 CBX6O95503 412 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 PRKAR1AP10644 381 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 VAV1P15498 845 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 HARS2P49590 506 aaKnown RBP6.92□□□□□ -1.3
CDKL5-204ENST00000623364 PDE6CP51160 858 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 NXPH1P58417 271 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 PTENP60484 403 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 SSRP1Q08945 709 aaKnown RBP6.92□□□□□ -1.3
CDKL5-204ENST00000623364 ART3Q13508 389 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 DEFB109BQ30KR1 87 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 ZC2HC1CQ53FD0 456 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-204ENST00000623364 ARMCX5Q6P1M9 558 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 USP37Q86T82 979 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 CACUL1Q86Y37 369 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 ETFBKMTQ8IXQ9 262 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 SLC25A45Q8N413 288 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 WDR48Q8TAF3 677 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 TCP11Q8WWU5 503 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 JPH3Q8WXH2 748 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-204ENST00000623364 APOLD1Q96LR9 279 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 EPAS1Q99814 870 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 UBAC1Q9BSL1 405 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 BTBD1Q9H0C5 482 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 EPB41L5Q9HCM4 733 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 MAGED2Q9UNF1 606 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-204ENST00000623364 NEU2Q9Y3R4 380 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 PCDHA5Q9Y5H7 936 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 STON1Q9Y6Q2 735 aa6.92□□□□□ -1.3
CDKL5-204ENST00000623364 LEFTY2O00292 366 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 ZG16O60844 167 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 SORBS2O94875 1100 aaKnown RBP6.91□□□□□ -1.3
CDKL5-204ENST00000623364 LARGE1O95461 756 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 FGAP02671 866 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 HGFP14210 728 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 LIFP15018 202 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 HMGA1P17096 107 aaKnown RBP6.91□□□□□ -1.3
CDKL5-204ENST00000623364 HDCP19113 662 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 RBMXP38159 391 aaKnown RBP6.91□□□□□ -1.3
CDKL5-204ENST00000623364 MBTD1Q05BQ5 628 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 CDC20Q12834 499 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 DMP1Q13316 513 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-204ENST00000623364 SPIDRQ14159 915 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 TFDP1Q14186 410 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 MYBPC2Q14324 1141 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 AMHR2Q16671 573 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 PRR30Q53SZ7 412 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-204ENST00000623364 LY6G5CQ5SRR4 150 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 ZMYM1Q5SVZ6 1142 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 NUGGCQ68CJ6 796 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 KIAA0895LQ68EN5 471 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 GRAMD4Q6IC98 578 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 CLEC9AQ6UXN8 241 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 FERMT3Q86UX7 667 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 IL22RA1Q8N6P7 574 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 LRRC15Q8TF66 581 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 NINJ1Q92982 152 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 INTS2Q9H0H0 1204 aaKnown RBP6.91□□□□□ -1.3
CDKL5-204ENST00000623364 SLC38A7Q9NVC3 462 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 PLA2G2EQ9NZK7 142 aa6.91□□□□□ -1.3
CDKL5-204ENST00000623364 UXTQ9UBK9 157 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms