RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 RBL1P28749 1068 aa16.66■□□□□ 0.26
GABRB3-215ENST00000622697 GTF2BQ00403 316 aa16.66■□□□□ 0.26
GABRB3-215ENST00000622697 OLFML2BQ68BL8 750 aa16.66■□□□□ 0.26
GABRB3-215ENST00000622697 ELMOD1Q8N336 334 aa16.66■□□□□ 0.26
GABRB3-215ENST00000622697 DNERQ8NFT8 737 aa16.66■□□□□ 0.26
GABRB3-215ENST00000622697 USP13Q92995 863 aaPredicted RBP16.66■□□□□ 0.26
GABRB3-215ENST00000622697 THAP11Q96EK4 314 aa16.66■□□□□ 0.26
GABRB3-215ENST00000622697 RPRD1AQ96P16 312 aaPredicted RBP16.66■□□□□ 0.26
GABRB3-215ENST00000622697 P2RX7Q99572 595 aaKnown RBP16.66■□□□□ 0.26
GABRB3-215ENST00000622697 ERVK-5Q9HDB9 667 aa16.66■□□□□ 0.26
GABRB3-215ENST00000622697 CASTOR2A6NHX0 329 aa16.66■□□□□ 0.26
GABRB3-215ENST00000622697 FCHO1O14526 889 aa16.66■□□□□ 0.26
GABRB3-215ENST00000622697 ADIGQ0VDE8 80 aa16.66■□□□□ 0.26
GABRB3-215ENST00000622697 ZCCHC9Q8N567 271 aaKnown RBP16.66■□□□□ 0.26
GABRB3-215ENST00000622697 CCT7Q99832 543 aa16.66■□□□□ 0.26
GABRB3-215ENST00000622697 CYP3A43Q9HB55 503 aa16.66■□□□□ 0.26
GABRB3-215ENST00000622697 C2CD2LO14523 706 aa16.66■□□□□ 0.26
GABRB3-215ENST00000622697 CYP1A2P05177 515 aa16.66■□□□□ 0.26
GABRB3-215ENST00000622697 KRT16P08779 473 aa16.66■□□□□ 0.26
GABRB3-215ENST00000622697 ABCE1P61221 599 aaKnown RBP16.66■□□□□ 0.26
GABRB3-215ENST00000622697 TDRD10Q5VZ19 366 aaKnown RBP16.66■□□□□ 0.26
GABRB3-215ENST00000622697 SAMD3Q8N6K7 520 aa16.66■□□□□ 0.26
GABRB3-215ENST00000622697 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.66■□□□□ 0.26
GABRB3-215ENST00000622697 CNDP1Q96KN2 507 aa16.66■□□□□ 0.26
GABRB3-215ENST00000622697 FICDQ9BVA6 458 aa16.66■□□□□ 0.26
GABRB3-215ENST00000622697 SCHIP1Q9P0W5 487 aaPredicted RBP16.66■□□□□ 0.26
GABRB3-215ENST00000622697 USP12O75317 370 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 NNMTP40261 264 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 TNFSF9P41273 254 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 BST2Q10589 180 aaKnown RBP16.65■□□□□ 0.26
GABRB3-215ENST00000622697 POU6F1Q14863 301 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 FBXO47Q5MNV8 452 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 HGSNATQ68CP4 663 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 PDPK2PQ6A1A2 396 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 KATNAL2Q8IYT4 538 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 MYO1GB0I1T2 1018 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 OPLAHO14841 1288 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 PTRHD1Q6GMV3 140 aaKnown RBP16.65■□□□□ 0.26
GABRB3-215ENST00000622697 IZUMO2Q6UXV1 221 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 TEKT4Q8WW24 435 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 USP6NLQ92738 828 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 IRAK4Q9NWZ3 460 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 PKD2L2Q9NZM6 624 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 PRKAG2Q9UGJ0 569 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 NOL4O94818 638 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 ENDOD1O94919 500 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 RPL7AP62424 266 aaKnown RBP16.65■□□□□ 0.26
GABRB3-215ENST00000622697 DAB2P98082 770 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 ERO1BQ86YB8 467 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 CD302Q8IX05 232 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 SEMA4DQ92854 862 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 SH3GL3Q99963 347 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 TCHHQ07283 1943 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 ACADSP16219 412 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 ATICP31939 592 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 ABCG1P45844 678 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 CSHL1Q14406 222 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 ZNF268Q14587 947 aaPredicted RBP16.65■□□□□ 0.26
GABRB3-215ENST00000622697 DUPD1Q68J44 220 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 TDRD5Q8NAT2 981 aaKnown RBP16.65■□□□□ 0.26
GABRB3-215ENST00000622697 GLRA2P23416 452 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 AKT1P31749 480 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 MPP3Q13368 585 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 DPYSL3Q14195 570 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 SEL1L3Q68CR1 1132 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 C16orf46Q6P387 395 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 TUBGCP3Q96CW5 907 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 VANGL2Q9ULK5 521 aa16.65■□□□□ 0.26
GABRB3-215ENST00000622697 NCANO14594 1321 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 TMEM247A6NEH6 219 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 CCDC130P13994 396 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 NFKBIAP25963 317 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 CPT1AP50416 773 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 TCHHL1Q5QJ38 904 aaPredicted RBP16.64■□□□□ 0.25
GABRB3-215ENST00000622697 DEFB107AQ8IZN7 70 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 REPS2Q8NFH8 660 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 PCYOX1Q9UHG3 505 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 ODC1P11926 461 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 KCNK10P57789 538 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 ELF3P78545 371 aaPredicted RBP16.64■□□□□ 0.25
GABRB3-215ENST00000622697 CRADDP78560 199 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 SH3KBP1Q96B97 665 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 SLITRK1Q96PX8 696 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 KDELR1P24390 212 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 SLC1A6P48664 564 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 DCP1BQ8IZD4 617 aaKnown RBP16.64■□□□□ 0.25
GABRB3-215ENST00000622697 OR5B17Q8NGF7 314 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 GPR63Q9BZJ6 419 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 TRPC5OSA6NMA1 111 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 TIMM44O43615 452 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 MYO1DO94832 1006 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 KBTBD12Q3ZCT8 623 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 UNC45BQ8IWX7 931 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 RNF148Q8N7C7 305 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 COPS5Q92905 334 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 APOPT1Q96IL0 206 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 VPS50Q96JG6 964 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 C17orf80Q9BSJ5 609 aa16.64■□□□□ 0.25
GABRB3-215ENST00000622697 MAGEA13PA6NCF6 341 aa16.63■□□□□ 0.25
GABRB3-215ENST00000622697 ACKR2O00590 384 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms