RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 MON1AQ86VX9 555 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 ARHGAP18Q8N392 663 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 KIF18AQ8NI77 898 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 EDEM1Q92611 657 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 SLITRK1Q96PX8 696 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 DDX23Q9BUQ8 820 aaKnown RBP18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 ZNF576Q9H609 170 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 TLE6Q9H808 572 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 MAN1C1Q9NR34 630 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 NAALADL1Q9UQQ1 740 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 COLQQ9Y215 455 aaPredicted RBP18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 C1RP00736 705 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 FYNP06241 537 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 NCAM1P13591 858 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 NOS2P35228 1153 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 PTPN9P43378 593 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 PGFP49763 221 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 DNA2P51530 1060 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 C15orf59Q2T9L4 293 aaPredicted RBP18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 PPM1LQ5SGD2 360 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 SYPL2Q5VXT5 272 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 BTBD8Q5XKL5 378 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 ITIH5Q86UX2 942 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 SLC22A17Q8WUG5 538 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 MRPL38Q96DV4 380 aaKnown RBP18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 PLEKHA4Q9H4M7 779 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 STAP1Q9ULZ2 295 aa18.63■□□□□ 0.57
PTCHD3-202ENST00000622555 RNF8O76064 485 aa18.62■□□□□ 0.57
PTCHD3-202ENST00000622555 HMGA1P17096 107 aaKnown RBP18.62■□□□□ 0.57
PTCHD3-202ENST00000622555 SULT1E1P49888 294 aa18.62■□□□□ 0.57
PTCHD3-202ENST00000622555 ACAP1Q15027 740 aa18.62■□□□□ 0.57
PTCHD3-202ENST00000622555 CC2D1AQ6P1N0 951 aaPredicted RBP18.62■□□□□ 0.57
PTCHD3-202ENST00000622555 DNAJB7Q7Z6W7 309 aaPredicted RBP18.62■□□□□ 0.57
PTCHD3-202ENST00000622555 PSMG2Q969U7 264 aa18.62■□□□□ 0.57
PTCHD3-202ENST00000622555 TLR10Q9BXR5 811 aa18.62■□□□□ 0.57
PTCHD3-202ENST00000622555 NMUR1Q9HB89 426 aa18.62■□□□□ 0.57
PTCHD3-202ENST00000622555 TLR8Q9NR97 1041 aaKnown RBP18.62■□□□□ 0.57
PTCHD3-202ENST00000622555 ABCC13Q9NSE7 274 aa18.62■□□□□ 0.57
PTCHD3-202ENST00000622555 ASB3Q9Y575 518 aa18.62■□□□□ 0.57
PTCHD3-202ENST00000622555 TFE3P19532 575 aaPredicted RBP18.61■□□□□ 0.57
PTCHD3-202ENST00000622555 NRIP1P48552 1158 aa18.61■□□□□ 0.57
PTCHD3-202ENST00000622555 RPS6KA1Q15418 735 aa18.61■□□□□ 0.57
PTCHD3-202ENST00000622555 SLC25A52Q3SY17 297 aa18.61■□□□□ 0.57
PTCHD3-202ENST00000622555 SH3PXD2AQ5TCZ1 1133 aa18.61■□□□□ 0.57
PTCHD3-202ENST00000622555 ELMOD1Q8N336 334 aa18.61■□□□□ 0.57
PTCHD3-202ENST00000622555 FAM172AQ8WUF8 416 aa18.61■□□□□ 0.57
PTCHD3-202ENST00000622555 TRMT2BQ96GJ1 504 aaKnown RBP18.61■□□□□ 0.57
PTCHD3-202ENST00000622555 MYRFLQ96LU7 910 aa18.61■□□□□ 0.57
PTCHD3-202ENST00000622555 ZNF512Q96ME7 567 aaPredicted RBP18.61■□□□□ 0.57
PTCHD3-202ENST00000622555 TBCBQ99426 244 aa18.61■□□□□ 0.57
PTCHD3-202ENST00000622555 HCFC2Q9Y5Z7 792 aa18.61■□□□□ 0.57
PTCHD3-202ENST00000622555 LRCH4O75427 683 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 PSEN1P49768 467 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 DUSP6Q16828 381 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 RTL10Q7L3V2 364 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 BEND5Q7L4P6 421 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 PDZD8Q8NEN9 1154 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 CD101Q93033 1021 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 HES6Q96HZ4 224 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 OSER1Q9NX31 292 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 UXTQ9UBK9 157 aaPredicted RBP18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 DPP7Q9UHL4 492 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 TRANK1O15050 2925 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 SPDYE4A6NLX3 237 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 MIF4GDA9UHW6 222 aaKnown RBP18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 CCL16O15467 120 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 ZMYND10O75800 440 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 TAS2R40P59535 323 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 PITX1P78337 314 aaPredicted RBP18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 RAB6CQ53S08 254 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 ELMSAN1Q6PJG2 1045 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 RSRC2Q7L4I2 434 aaKnown RBP18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 ARFGAP1Q8N6T3 406 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 RNF139Q8WU17 664 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 HDAC7Q8WUI4 952 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 OVCA2Q8WZ82 227 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 PPP2R3CQ969Q6 453 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 NPY6RQ99463 290 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 RAB6CQ9H0N0 254 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 L2HGDHQ9H9P8 463 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 RRN3Q9NYV6 651 aa18.6■□□□□ 0.57
PTCHD3-202ENST00000622555 ANAPC1Q9H1A4 1944 aa18.59■□□□□ 0.57
PTCHD3-202ENST00000622555 OBSL1O75147 1896 aa18.59■□□□□ 0.57
PTCHD3-202ENST00000622555 SYNJ2BP-COX16A0A087WUM0 186 aa18.59■□□□□ 0.57
PTCHD3-202ENST00000622555 M0QYT0 321 aa18.59■□□□□ 0.57
PTCHD3-202ENST00000622555 RFPL2O75678 378 aa18.59■□□□□ 0.57
PTCHD3-202ENST00000622555 ZDHHC11BP0C7U3 371 aa18.59■□□□□ 0.57
PTCHD3-202ENST00000622555 RALAP11233 206 aa18.59■□□□□ 0.57
PTCHD3-202ENST00000622555 TCF4P15884 667 aa18.59■□□□□ 0.57
PTCHD3-202ENST00000622555 CTNNA1P35221 906 aaKnown RBP18.59■□□□□ 0.57
PTCHD3-202ENST00000622555 GJC1P36383 396 aa18.59■□□□□ 0.57
PTCHD3-202ENST00000622555 UBL4BQ8N7F7 174 aa18.59■□□□□ 0.57
PTCHD3-202ENST00000622555 ADAM32Q8TC27 787 aa18.59■□□□□ 0.57
PTCHD3-202ENST00000622555 CENPIQ92674 756 aaPredicted RBP18.59■□□□□ 0.57
PTCHD3-202ENST00000622555 KRT35Q92764 455 aa18.59■□□□□ 0.57
PTCHD3-202ENST00000622555 NT5C3BQ969T7 300 aa18.59■□□□□ 0.57
PTCHD3-202ENST00000622555 PSMB7Q99436 277 aa18.59■□□□□ 0.57
PTCHD3-202ENST00000622555 ADAM33Q9BZ11 813 aa18.59■□□□□ 0.57
PTCHD3-202ENST00000622555 FAM204AQ9H8W3 233 aa18.59■□□□□ 0.57
PTCHD3-202ENST00000622555 CLIC5Q9NZA1 410 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms