RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 GPR25O00155 361 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 AVILO75366 819 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 PMPCBO75439 489 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 ERBB2P04626 1255 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 HADHBP55084 474 aaKnown RBP13.73□□□□□ -0.21
SIRPA-204ENST00000622179 LRRC36Q1X8D7 754 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 MTHFD1LQ6UB35 978 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 ZDHHC24Q6UX98 284 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 PRPF39Q86UA1 669 aaKnown RBP13.73□□□□□ -0.21
SIRPA-204ENST00000622179 SLC25A41Q8N5S1 370 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 NSL1Q96IY1 281 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 SCOCQ9UIL1 159 aa13.73□□□□□ -0.21
SIRPA-204ENST00000622179 SMIM24O75264 130 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 FSBPO95073 299 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 TRUB2O95900 331 aaKnown RBP13.72□□□□□ -0.21
SIRPA-204ENST00000622179 CYP1A1P04798 512 aaPredicted RBP13.72□□□□□ -0.21
SIRPA-204ENST00000622179 TGM2P21980 687 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 FASTKD3Q14CZ7 662 aaKnown RBP13.72□□□□□ -0.21
SIRPA-204ENST00000622179 BBS12Q6ZW61 710 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 FUKQ8N0W3 1084 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 ZNF75CPQ92670 426 aaPredicted RBP13.72□□□□□ -0.21
SIRPA-204ENST00000622179 PTPRN2Q92932 1015 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 B3GNT5Q9BYG0 378 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 DDX43Q9NXZ2 648 aaKnown RBP13.72□□□□□ -0.21
SIRPA-204ENST00000622179 PFDN6O15212 129 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 APOEP02649 317 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 CCND1P24385 295 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 C1orf127Q8N9H9 656 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 NUF2Q9BZD4 464 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 L3MBTL1Q9Y468 752 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.72□□□□□ -0.21
SIRPA-204ENST00000622179 A0A1W2PPM1 405 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 JCHAINP01591 159 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 ITGAVP06756 1048 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 TAC1P20366 129 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 YWHAZP63104 245 aaKnown RBP13.72□□□□□ -0.21
SIRPA-204ENST00000622179 CRADDP78560 199 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 C4orf22Q6V702 233 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 TTC8Q8TAM2 541 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 SGF29Q96ES7 293 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 TBCBQ99426 244 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 ZDHHC18Q9NUE0 388 aa13.72□□□□□ -0.21
SIRPA-204ENST00000622179 USP12O75317 370 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 LRCH4O75427 683 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 MTA2O94776 668 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 CBX6O95503 412 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 THP07101 528 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 FDFT1P37268 417 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 PPP1R26Q5T8A7 1209 aaPredicted RBP13.71□□□□□ -0.21
SIRPA-204ENST00000622179 TLK2Q86UE8 772 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 LRGUKQ96M69 825 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 SNRNP25Q9BV90 132 aaKnown RBP13.71□□□□□ -0.21
SIRPA-204ENST00000622179 LRRC4CQ9HCJ2 640 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 ABI2Q9NYB9 513 aaPredicted RBP13.71□□□□□ -0.21
SIRPA-204ENST00000622179 CPSF2Q9P2I0 782 aaKnown RBP13.71□□□□□ -0.21
SIRPA-204ENST00000622179 NAV1Q8NEY1 1877 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 CD48P09326 243 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 ICAM3P32942 547 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 PIK3R5Q8WYR1 880 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 CELF6Q96J87 481 aaKnown RBP13.71□□□□□ -0.21
SIRPA-204ENST00000622179 GPR88Q9GZN0 384 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 GHRP10912 638 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 URGCPQ8TCY9 931 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 FBXL18Q96ME1 805 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 TEPSINQ96N21 525 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 SERPINI1Q99574 410 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 TRIM56Q9BRZ2 755 aaKnown RBP13.71□□□□□ -0.21
SIRPA-204ENST00000622179 OSBPL1AQ9BXW6 950 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 FAM96AQ9H5X1 160 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 EPS15L1Q9UBC2 864 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 SNCAIPQ9Y6H5 919 aa13.71□□□□□ -0.21
SIRPA-204ENST00000622179 WDR27A2RRH5 827 aa13.71□□□□□ -0.22
SIRPA-204ENST00000622179 B4GALT4O60513 344 aa13.71□□□□□ -0.22
SIRPA-204ENST00000622179 POMCP01189 267 aa13.71□□□□□ -0.22
SIRPA-204ENST00000622179 SETSIPP0DME0 302 aa13.71□□□□□ -0.22
SIRPA-204ENST00000622179 OR1G1P47890 313 aa13.71□□□□□ -0.22
SIRPA-204ENST00000622179 PAPOLAP51003 745 aaKnown RBP13.71□□□□□ -0.22
SIRPA-204ENST00000622179 AQP5P55064 265 aa13.71□□□□□ -0.22
SIRPA-204ENST00000622179 ACAP1Q15027 740 aa13.71□□□□□ -0.22
SIRPA-204ENST00000622179 TMEM192Q8IY95 271 aa13.71□□□□□ -0.22
SIRPA-204ENST00000622179 HTR3CQ8WXA8 447 aa13.71□□□□□ -0.22
SIRPA-204ENST00000622179 SCG3Q8WXD2 468 aaKnown RBP13.71□□□□□ -0.22
SIRPA-204ENST00000622179 RNF157Q96PX1 679 aa13.71□□□□□ -0.22
SIRPA-204ENST00000622179 SRPK1Q96SB4 655 aaKnown RBP13.71□□□□□ -0.22
SIRPA-204ENST00000622179 TINF2Q9BSI4 451 aa13.71□□□□□ -0.22
SIRPA-204ENST00000622179 TMEM120AQ9BXJ8 343 aa13.71□□□□□ -0.22
SIRPA-204ENST00000622179 TSR3Q9UJK0 312 aaKnown RBP13.71□□□□□ -0.22
SIRPA-204ENST00000622179 MYH11P35749 1972 aa13.71□□□□□ -0.22
SIRPA-204ENST00000622179 UBA6A0AVT1 1052 aaPredicted RBP13.7□□□□□ -0.22
SIRPA-204ENST00000622179 TCF4P15884 667 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 TPH1P17752 444 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 RPL10AP62906 217 aaKnown RBP13.7□□□□□ -0.22
SIRPA-204ENST00000622179 HIC1Q14526 733 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 HABP4Q5JVS0 413 aaKnown RBP13.7□□□□□ -0.22
SIRPA-204ENST00000622179 GSDMBQ8TAX9 411 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 ELOVL4Q9GZR5 314 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 DONSONQ9NYP3 566 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 TADA2AO75478 443 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 TRPA1O75762 1119 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 MFSD10Q14728 455 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms