RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 NPAS3Q8IXF0 933 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 ZNF276Q8N554 614 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 WDTC1Q8N5D0 677 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 OR8K1Q8NGG5 319 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 SCAMP5Q8TAC9 235 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 RIN3Q8TB24 985 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 UBA3Q8TBC4 463 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 SLC20A1Q8WUM9 679 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 ING5Q8WYH8 240 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 DDX1Q92499 740 aaKnown RBP5.53□□□□□ -1.52
SHMT1-211ENST00000618902 BAP1Q92560 729 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 NDRG1Q92597 394 aaKnown RBP5.53□□□□□ -1.52
SHMT1-211ENST00000618902 C8orf48Q96LL4 319 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 HEXIM2Q96MH2 286 aaKnown RBP5.53□□□□□ -1.52
SHMT1-211ENST00000618902 ASB16Q96NS5 453 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 LRRC3BQ96PB8 259 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 SLC22A12Q96S37 553 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 CDK5RAP1Q96SZ6 601 aaKnown RBP5.53□□□□□ -1.52
SHMT1-211ENST00000618902 CORO1BQ9BR76 489 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 MED10Q9BTT4 135 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 RPP25Q9BUL9 199 aaKnown RBP5.53□□□□□ -1.52
SHMT1-211ENST00000618902 TTLL2Q9BWV7 592 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 UBXN6Q9BZV1 441 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 TSGA10Q9BZW7 698 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 NUCKS1Q9H1E3 243 aaKnown RBP5.53□□□□□ -1.52
SHMT1-211ENST00000618902 MFSD1Q9H3U5 465 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 TASP1Q9H6P5 420 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 C8orf33Q9H7E9 229 aaPredicted RBP5.53□□□□□ -1.52
SHMT1-211ENST00000618902 CSNK1G1Q9HCP0 422 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 NLRC4Q9NPP4 1024 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 C11orf16Q9NQ32 467 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 IL37Q9NZH6 218 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 TJP2Q9UDY2 1190 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 CDC23Q9UJX2 597 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 FBXL21Q9UKT6 434 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 RAB21Q9UL25 225 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 KIAA1257Q9ULG3 409 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 MRFAP1Q9Y605 127 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 LAMA1P25391 3075 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 DNAH14Q0VDD8 3507 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 DMXL1Q9Y485 3027 aa5.53□□□□□ -1.52
SHMT1-211ENST00000618902 DENND4CQ5VZ89 1909 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 OBSL1O75147 1896 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 A0A1W2PRU2 124 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 FAM170AA1A519 330 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 FAM92AA1XBS5 289 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 TARSL2A2RTX5 802 aaKnown RBP5.52□□□□□ -1.53
SHMT1-211ENST00000618902 F8VZ95 297 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 DPYSL4O14531 572 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 F11P03951 625 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 ASGR2P07307 311 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 PAEPP09466 180 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 ZDHHC11BP0C7U3 371 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 FAM200BP0CF97 657 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 VDRP11473 427 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 MYL4P12829 197 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 CD19P15391 556 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 NPR3P17342 541 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 FCARP24071 287 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 ANXA13P27216 316 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 AVPR2P30518 371 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 AVPR1AP37288 418 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 GRIK1P39086 918 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 PLA2G5P39877 138 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 PSEN1P49768 467 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 RGS7P49802 495 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 KIF11P52732 1056 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 NRLP54845 237 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 MFAP3P55082 362 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 PDE4CQ08493 712 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 GOLGA8FQ08AF8 430 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 GOLGA8DPQ0D2H9 430 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 RAPGEF1Q13905 1077 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 STILQ15468 1287 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 TEAD2Q15562 447 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 CNGA2Q16280 664 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 MEA1Q16626 185 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 ERCC6LQ2NKX8 1250 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 SGO2Q562F6 1265 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 SNX30Q5VWJ9 437 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 PMF1Q6P1K2 205 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 FBXO38Q6PIJ6 1188 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 ZC3H14Q6PJT7 736 aaKnown RBP5.52□□□□□ -1.53
SHMT1-211ENST00000618902 LCLAT1Q6UWP7 414 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 HFE2Q6ZVN8 426 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 ZNF771Q7L3S4 317 aaPredicted RBP5.52□□□□□ -1.53
SHMT1-211ENST00000618902 GET4Q7L5D6 327 aaPredicted RBP5.52□□□□□ -1.53
SHMT1-211ENST00000618902 ENOSF1Q7L5Y1 443 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 HDXQ7Z353 690 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 SCD5Q86SK9 330 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 TADA2BQ86TJ2 420 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 NOP9Q86U38 636 aaKnown RBP5.52□□□□□ -1.53
SHMT1-211ENST00000618902 PIGZQ86VD9 579 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 MON1AQ86VX9 555 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 RALGPS2Q86X27 583 aaPredicted RBP5.52□□□□□ -1.53
SHMT1-211ENST00000618902 CELF5Q8N6W0 485 aaKnown RBP5.52□□□□□ -1.53
SHMT1-211ENST00000618902 ANKRD52Q8NB46 1076 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 ZNF606Q8WXB4 792 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 RSAD2Q8WXG1 361 aa5.52□□□□□ -1.53
SHMT1-211ENST00000618902 MRPS31Q92665 395 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms