RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 TRNP1Q6NT89 227 aa21.45■■□□□ 1.02
SDHA-220ENST00000617470 SLC35F5Q8WV83 523 aa21.45■■□□□ 1.02
SDHA-220ENST00000617470 C1orf54Q8WWF1 131 aa21.45■■□□□ 1.02
SDHA-220ENST00000617470 ERP44Q9BS26 406 aa21.45■■□□□ 1.02
SDHA-220ENST00000617470 R3HDM2Q9Y2K5 976 aaKnown RBP21.45■■□□□ 1.02
SDHA-220ENST00000617470 CDH23Q9H251 3354 aa21.44■■□□□ 1.02
SDHA-220ENST00000617470 C2orf71A6NGG8 1288 aa21.44■■□□□ 1.02
SDHA-220ENST00000617470 CLDN5O00501 218 aa21.44■■□□□ 1.02
SDHA-220ENST00000617470 PSMA2P25787 234 aa21.44■■□□□ 1.02
SDHA-220ENST00000617470 KCNJ1P48048 391 aa21.44■■□□□ 1.02
SDHA-220ENST00000617470 RGS7P49802 495 aa21.44■■□□□ 1.02
SDHA-220ENST00000617470 NDUFV1P49821 464 aa21.44■■□□□ 1.02
SDHA-220ENST00000617470 ROR1Q01973 937 aa21.44■■□□□ 1.02
SDHA-220ENST00000617470 MAPRE1Q15691 268 aaKnown RBP21.44■■□□□ 1.02
SDHA-220ENST00000617470 SLC8B1Q6J4K2 584 aa21.44■■□□□ 1.02
SDHA-220ENST00000617470 FAM183BPQ6ZVS7 135 aa21.44■■□□□ 1.02
SDHA-220ENST00000617470 GPR65Q8IYL9 337 aa21.44■■□□□ 1.02
SDHA-220ENST00000617470 SLC2A14Q8TDB8 520 aa21.44■■□□□ 1.02
SDHA-220ENST00000617470 MYLPFQ96A32 169 aa21.44■■□□□ 1.02
SDHA-220ENST00000617470 PCED1BQ96HM7 432 aa21.44■■□□□ 1.02
SDHA-220ENST00000617470 HEMGNQ9BXL5 484 aa21.44■■□□□ 1.02
SDHA-220ENST00000617470 SLC4A5Q9BY07 1137 aa21.44■■□□□ 1.02
SDHA-220ENST00000617470 DPH5Q9H2P9 285 aa21.44■■□□□ 1.02
SDHA-220ENST00000617470 TTYH1Q9H313 450 aaPredicted RBP21.44■■□□□ 1.02
SDHA-220ENST00000617470 PRDM12Q9H4Q4 367 aa21.44■■□□□ 1.02
SDHA-220ENST00000617470 FNIP2Q9P278 1114 aa21.44■■□□□ 1.02
SDHA-220ENST00000617470 UTP11Q9Y3A2 253 aaKnown RBP21.44■■□□□ 1.02
SDHA-220ENST00000617470 PI4K2BG5E9Z4 385 aa21.43■■□□□ 1.02
SDHA-220ENST00000617470 AGPSO00116 658 aa21.43■■□□□ 1.02
SDHA-220ENST00000617470 LRCH4O75427 683 aa21.43■■□□□ 1.02
SDHA-220ENST00000617470 KLRC2P26717 231 aa21.43■■□□□ 1.02
SDHA-220ENST00000617470 SLC25A11Q02978 314 aaKnown RBP21.43■■□□□ 1.02
SDHA-220ENST00000617470 FAM171BQ6P995 826 aa21.43■■□□□ 1.02
SDHA-220ENST00000617470 SPATA2LQ8IUW3 424 aaPredicted RBP21.43■■□□□ 1.02
SDHA-220ENST00000617470 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.43■■□□□ 1.02
SDHA-220ENST00000617470 RNF25Q96BH1 459 aaPredicted RBP21.43■■□□□ 1.02
SDHA-220ENST00000617470 FAM161BQ96MY7 647 aa21.43■■□□□ 1.02
SDHA-220ENST00000617470 OSBPL8Q9BZF1 889 aa21.43■■□□□ 1.02
SDHA-220ENST00000617470 LMAN2LQ9H0V9 348 aa21.43■■□□□ 1.02
SDHA-220ENST00000617470 RXFP1Q9HBX9 757 aa21.43■■□□□ 1.02
SDHA-220ENST00000617470 ABI2Q9NYB9 513 aaPredicted RBP21.43■■□□□ 1.02
SDHA-220ENST00000617470 IRAK3Q9Y616 596 aa21.43■■□□□ 1.02
SDHA-220ENST00000617470 OAS2P29728 719 aaKnown RBP21.43■■□□□ 1.02
SDHA-220ENST00000617470 ADCY2Q08462 1091 aa21.43■■□□□ 1.02
SDHA-220ENST00000617470 PDE4CQ08493 712 aa21.43■■□□□ 1.02
SDHA-220ENST00000617470 ZNF697Q5TEC3 545 aa21.43■■□□□ 1.02
SDHA-220ENST00000617470 PDE12Q6L8Q7 609 aaKnown RBP21.43■■□□□ 1.02
SDHA-220ENST00000617470 RNF19BQ6ZMZ0 732 aa21.43■■□□□ 1.02
SDHA-220ENST00000617470 CCDC50Q8IVM0 306 aa21.43■■□□□ 1.02
SDHA-220ENST00000617470 ATG4AQ8WYN0 398 aa21.43■■□□□ 1.02
SDHA-220ENST00000617470 ACSF2Q96CM8 615 aaPredicted RBP21.43■■□□□ 1.02
SDHA-220ENST00000617470 KLHL5Q96PQ7 755 aa21.43■■□□□ 1.02
SDHA-220ENST00000617470 SLITRK1Q96PX8 696 aa21.43■■□□□ 1.02
SDHA-220ENST00000617470 PKMYT1Q99640 499 aa21.43■■□□□ 1.02
SDHA-220ENST00000617470 B3GNT5Q9BYG0 378 aa21.43■■□□□ 1.02
SDHA-220ENST00000617470 TRIM31Q9BZY9 425 aa21.43■■□□□ 1.02
SDHA-220ENST00000617470 WDR27A2RRH5 827 aa21.42■■□□□ 1.02
SDHA-220ENST00000617470 ADH1AP07327 375 aa21.42■■□□□ 1.02
SDHA-220ENST00000617470 IL1R2P27930 398 aa21.42■■□□□ 1.02
SDHA-220ENST00000617470 FNTAP49354 379 aa21.42■■□□□ 1.02
SDHA-220ENST00000617470 GPR17Q13304 367 aa21.42■■□□□ 1.02
SDHA-220ENST00000617470 HLTFQ14527 1009 aaKnown RBP eCLIP21.42■■□□□ 1.02
SDHA-220ENST00000617470 NFE2Q16621 373 aaPredicted RBP21.42■■□□□ 1.02
SDHA-220ENST00000617470 FAM102AQ5T9C2 384 aaPredicted RBP21.42■■□□□ 1.02
SDHA-220ENST00000617470 MFSD7Q6UXD7 560 aa21.42■■□□□ 1.02
SDHA-220ENST00000617470 C4orf50Q6ZRC1 276 aa21.42■■□□□ 1.02
SDHA-220ENST00000617470 TMEM110Q86TL2 294 aa21.42■■□□□ 1.02
SDHA-220ENST00000617470 RBM23Q86U06 439 aaKnown RBP21.42■■□□□ 1.02
SDHA-220ENST00000617470 RCOR2Q8IZ40 523 aa21.42■■□□□ 1.02
SDHA-220ENST00000617470 MREGQ8N565 214 aa21.42■■□□□ 1.02
SDHA-220ENST00000617470 IPO4Q8TEX9 1081 aaKnown RBP21.42■■□□□ 1.02
SDHA-220ENST00000617470 RAPGEF5Q92565 580 aa21.42■■□□□ 1.02
SDHA-220ENST00000617470 RHOBTB2Q9BYZ6 727 aa21.42■■□□□ 1.02
SDHA-220ENST00000617470 RAB17Q9H0T7 212 aa21.42■■□□□ 1.02
SDHA-220ENST00000617470 TMEM265A0A087WTH1 108 aa21.41■■□□□ 1.02
SDHA-220ENST00000617470 SETSIPP0DME0 302 aa21.41■■□□□ 1.02
SDHA-220ENST00000617470 ADCY1Q08828 1119 aa21.41■■□□□ 1.02
SDHA-220ENST00000617470 FUKQ8N0W3 1084 aa21.41■■□□□ 1.02
SDHA-220ENST00000617470 ATAD1Q8NBU5 361 aa21.41■■□□□ 1.02
SDHA-220ENST00000617470 KHSRPQ92945 711 aaKnown RBP eCLIP21.41■■□□□ 1.02
SDHA-220ENST00000617470 DCLK3Q9C098 648 aa21.41■■□□□ 1.02
SDHA-220ENST00000617470 FAM114A2Q9NRY5 505 aa21.41■■□□□ 1.02
SDHA-220ENST00000617470 HESX1Q9UBX0 185 aa21.41■■□□□ 1.02
SDHA-220ENST00000617470 PCDHB5Q9Y5E4 795 aa21.41■■□□□ 1.02
SDHA-220ENST00000617470 MYO9BQ13459 2157 aa21.41■■□□□ 1.02
SDHA-220ENST00000617470 PER2O15055 1255 aa21.41■■□□□ 1.02
SDHA-220ENST00000617470 SYF2O95926 243 aaKnown RBP21.41■■□□□ 1.02
SDHA-220ENST00000617470 KRT1P04264 644 aa21.41■■□□□ 1.02
SDHA-220ENST00000617470 BDNFP23560 247 aa21.41■■□□□ 1.02
SDHA-220ENST00000617470 FLT3P36888 993 aa21.41■■□□□ 1.02
SDHA-220ENST00000617470 RAB33AQ14088 237 aa21.41■■□□□ 1.02
SDHA-220ENST00000617470 GRIN2CQ14957 1233 aa21.41■■□□□ 1.02
SDHA-220ENST00000617470 OR6B2Q6IFH4 312 aa21.41■■□□□ 1.02
SDHA-220ENST00000617470 OLFML1Q6UWY5 402 aa21.41■■□□□ 1.02
SDHA-220ENST00000617470 STK32AQ8WU08 396 aa21.41■■□□□ 1.02
SDHA-220ENST00000617470 SLCO2A1Q92959 643 aa21.41■■□□□ 1.02
SDHA-220ENST00000617470 MRPL38Q96DV4 380 aaKnown RBP21.41■■□□□ 1.02
SDHA-220ENST00000617470 ZDHHC18Q9NUE0 388 aa21.41■■□□□ 1.02
SDHA-220ENST00000617470 MTMR11A4FU01 709 aa21.4■■□□□ 1.02
SDHA-220ENST00000617470 C3orf70A6NLC5 250 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms