RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 YWHAGP61981 247 aaKnown RBP eCLIP23.61■■□□□ 1.37
SRRM1-222ENST00000596378 MFSD10Q14728 455 aa23.61■■□□□ 1.37
SRRM1-222ENST00000596378 TLK2Q86UE8 772 aa23.61■■□□□ 1.37
SRRM1-222ENST00000596378 PNMA8AQ86V59 439 aaPredicted RBP23.61■■□□□ 1.37
SRRM1-222ENST00000596378 UNC93AQ86WB7 457 aa23.61■■□□□ 1.37
SRRM1-222ENST00000596378 CCDC110Q8TBZ0 833 aa23.61■■□□□ 1.37
SRRM1-222ENST00000596378 DHX35Q9H5Z1 703 aaKnown RBP23.61■■□□□ 1.37
SRRM1-222ENST00000596378 PHTF1Q9UMS5 762 aa23.61■■□□□ 1.37
SRRM1-222ENST00000596378 UBQLN1Q9UMX0 589 aaKnown RBP23.61■■□□□ 1.37
SRRM1-222ENST00000596378 GNEQ9Y223 722 aaKnown RBP23.61■■□□□ 1.37
SRRM1-222ENST00000596378 TEX264Q9Y6I9 313 aa23.61■■□□□ 1.37
SRRM1-222ENST00000596378 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.6■■□□□ 1.37
SRRM1-222ENST00000596378 MBLAC1A4D2B0 266 aaPredicted RBP23.6■■□□□ 1.37
SRRM1-222ENST00000596378 KPNA7A9QM74 516 aa23.6■■□□□ 1.37
SRRM1-222ENST00000596378 PIRO00625 290 aa23.6■■□□□ 1.37
SRRM1-222ENST00000596378 TGM2P21980 687 aa23.6■■□□□ 1.37
SRRM1-222ENST00000596378 CYP2F1P24903 491 aa23.6■■□□□ 1.37
SRRM1-222ENST00000596378 GNL1P36915 607 aaPredicted RBP23.6■■□□□ 1.37
SRRM1-222ENST00000596378 GBE1Q04446 702 aa23.6■■□□□ 1.37
SRRM1-222ENST00000596378 SNX17Q15036 470 aa23.6■■□□□ 1.37
SRRM1-222ENST00000596378 HHATQ5VTY9 493 aa23.6■■□□□ 1.37
SRRM1-222ENST00000596378 ARHGAP17Q68EM7 881 aa23.6■■□□□ 1.37
SRRM1-222ENST00000596378 ECHDC2Q86YB7 292 aa23.6■■□□□ 1.37
SRRM1-222ENST00000596378 SLC2A14Q8TDB8 520 aa23.6■■□□□ 1.37
SRRM1-222ENST00000596378 NDRG1Q92597 394 aaKnown RBP23.6■■□□□ 1.37
SRRM1-222ENST00000596378 CFAP36Q96G28 342 aa23.6■■□□□ 1.37
SRRM1-222ENST00000596378 ADRA1DP25100 572 aa23.6■■□□□ 1.37
SRRM1-222ENST00000596378 SLC18A1P54219 525 aa23.6■■□□□ 1.37
SRRM1-222ENST00000596378 BST2Q10589 180 aaKnown RBP23.6■■□□□ 1.37
SRRM1-222ENST00000596378 PDK4Q16654 411 aa23.6■■□□□ 1.37
SRRM1-222ENST00000596378 KBTBD12Q3ZCT8 623 aa23.6■■□□□ 1.37
SRRM1-222ENST00000596378 GALNTL6Q49A17 601 aa23.6■■□□□ 1.37
SRRM1-222ENST00000596378 TBC1D1Q86TI0 1168 aaPredicted RBP23.6■■□□□ 1.37
SRRM1-222ENST00000596378 SUGP1Q8IWZ8 645 aaKnown RBP23.6■■□□□ 1.37
SRRM1-222ENST00000596378 ANKLE1Q8NAG6 615 aa23.6■■□□□ 1.37
SRRM1-222ENST00000596378 NRDE2Q9H7Z3 1164 aa23.6■■□□□ 1.37
SRRM1-222ENST00000596378 PAK5Q9P286 719 aa23.6■■□□□ 1.37
SRRM1-222ENST00000596378 FETUBQ9UGM5 382 aa23.6■■□□□ 1.37
SRRM1-222ENST00000596378 WDR91A4D1P6 747 aa23.59■■□□□ 1.37
SRRM1-222ENST00000596378 SMAPO00193 183 aa23.59■■□□□ 1.37
SRRM1-222ENST00000596378 MDM4O15151 490 aa23.59■■□□□ 1.37
SRRM1-222ENST00000596378 NCALDP61601 193 aa23.59■■□□□ 1.37
SRRM1-222ENST00000596378 BEX3Q00994 111 aa23.59■■□□□ 1.37
SRRM1-222ENST00000596378 SPRYD7Q5W111 196 aa23.59■■□□□ 1.37
SRRM1-222ENST00000596378 CCDC185Q8N715 623 aa23.59■■□□□ 1.37
SRRM1-222ENST00000596378 ANKRD52Q8NB46 1076 aa23.59■■□□□ 1.37
SRRM1-222ENST00000596378 TBCBQ99426 244 aa23.59■■□□□ 1.37
SRRM1-222ENST00000596378 ECT2Q9H8V3 914 aa23.59■■□□□ 1.37
SRRM1-222ENST00000596378 KLHL14Q9P2G3 628 aa23.59■■□□□ 1.37
SRRM1-222ENST00000596378 MFHAS1Q9Y4C4 1052 aa23.59■■□□□ 1.37
SRRM1-222ENST00000596378 NR2E3Q9Y5X4 410 aa23.59■■□□□ 1.37
SRRM1-222ENST00000596378 CHADO15335 359 aa23.59■■□□□ 1.37
SRRM1-222ENST00000596378 TKTP29401 623 aaKnown RBP23.59■■□□□ 1.37
SRRM1-222ENST00000596378 L1CAMP32004 1257 aa23.59■■□□□ 1.37
SRRM1-222ENST00000596378 YWHAZP63104 245 aaKnown RBP23.59■■□□□ 1.37
SRRM1-222ENST00000596378 SLC10A2Q12908 348 aaPredicted RBP23.59■■□□□ 1.37
SRRM1-222ENST00000596378 PRPF39Q86UA1 669 aaKnown RBP23.59■■□□□ 1.37
SRRM1-222ENST00000596378 ARRDC4Q8NCT1 418 aa23.59■■□□□ 1.37
SRRM1-222ENST00000596378 LRRC8CQ8TDW0 803 aa23.59■■□□□ 1.37
SRRM1-222ENST00000596378 ZNF670Q9BS34 389 aa23.59■■□□□ 1.37
SRRM1-222ENST00000596378 CD248Q9HCU0 757 aa23.59■■□□□ 1.37
SRRM1-222ENST00000596378 APRTP07741 180 aa23.58■■□□□ 1.37
SRRM1-222ENST00000596378 MNAT1P51948 309 aa23.58■■□□□ 1.37
SRRM1-222ENST00000596378 BCAT1P54687 386 aa23.58■■□□□ 1.37
SRRM1-222ENST00000596378 CCL14Q16627 93 aa23.58■■□□□ 1.37
SRRM1-222ENST00000596378 UBXN11Q5T124 520 aa23.58■■□□□ 1.37
SRRM1-222ENST00000596378 PARP9Q8IXQ6 854 aa23.58■■□□□ 1.37
SRRM1-222ENST00000596378 STK32AQ8WU08 396 aa23.58■■□□□ 1.37
SRRM1-222ENST00000596378 USP6NLQ92738 828 aa23.58■■□□□ 1.37
SRRM1-222ENST00000596378 CYTH2Q99418 400 aa23.58■■□□□ 1.37
SRRM1-222ENST00000596378 C11orf84Q9BUA3 381 aaPredicted RBP23.58■■□□□ 1.37
SRRM1-222ENST00000596378 SNX25Q9H3E2 840 aa23.58■■□□□ 1.37
SRRM1-222ENST00000596378 ETNK2Q9NVF9 386 aa23.58■■□□□ 1.37
SRRM1-222ENST00000596378 SLC17A7Q9P2U7 560 aa23.58■■□□□ 1.37
SRRM1-222ENST00000596378 SLC15A5A6NIM6 579 aa23.58■■□□□ 1.36
SRRM1-222ENST00000596378 ATP2A2P16615 1042 aaKnown RBP23.58■■□□□ 1.36
SRRM1-222ENST00000596378 IGFBP6P24592 240 aaPredicted RBP23.58■■□□□ 1.36
SRRM1-222ENST00000596378 ELF3P78545 371 aaPredicted RBP23.58■■□□□ 1.36
SRRM1-222ENST00000596378 SLC26A9Q7LBE3 791 aa23.58■■□□□ 1.36
SRRM1-222ENST00000596378 PYROXD2Q8N2H3 581 aa23.58■■□□□ 1.36
SRRM1-222ENST00000596378 TCP10LQ8TDR4 215 aa23.58■■□□□ 1.36
SRRM1-222ENST00000596378 RTP4Q96DX8 246 aa23.58■■□□□ 1.36
SRRM1-222ENST00000596378 ETNK1Q9HBU6 452 aa23.58■■□□□ 1.36
SRRM1-222ENST00000596378 RXFP1Q9HBX9 757 aa23.58■■□□□ 1.36
SRRM1-222ENST00000596378 MTMR10Q9NXD2 777 aa23.58■■□□□ 1.36
SRRM1-222ENST00000596378 AP4E1Q9UPM8 1137 aa23.58■■□□□ 1.36
SRRM1-222ENST00000596378 FAM155BO75949 473 aa23.57■■□□□ 1.36
SRRM1-222ENST00000596378 MYL3P08590 195 aa23.57■■□□□ 1.36
SRRM1-222ENST00000596378 PTPN9P43378 593 aa23.57■■□□□ 1.36
SRRM1-222ENST00000596378 KCNJ2P63252 427 aa23.57■■□□□ 1.36
SRRM1-222ENST00000596378 PTK7Q13308 1070 aa23.57■■□□□ 1.36
SRRM1-222ENST00000596378 ZDHHC17Q8IUH5 632 aa23.57■■□□□ 1.36
SRRM1-222ENST00000596378 KCTD15Q96SI1 283 aaPredicted RBP23.57■■□□□ 1.36
SRRM1-222ENST00000596378 TRIM56Q9BRZ2 755 aaKnown RBP23.57■■□□□ 1.36
SRRM1-222ENST00000596378 BCLAF3A2AJT9 711 aaKnown RBP23.56■■□□□ 1.36
SRRM1-222ENST00000596378 VGLL3A8MV65 326 aa23.56■■□□□ 1.36
SRRM1-222ENST00000596378 GBP2P32456 591 aaPredicted RBP23.56■■□□□ 1.36
SRRM1-222ENST00000596378 PSEN2P49810 448 aa23.56■■□□□ 1.36
SRRM1-222ENST00000596378 ADAM17P78536 824 aa23.56■■□□□ 1.36
SRRM1-222ENST00000596378 BNIP1Q12981 228 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms