RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 CETN3O15182 167 aa17.96■□□□□ 0.47
CCDC9-202ENST00000595659 GREM1O60565 184 aa17.96■□□□□ 0.47
CCDC9-202ENST00000595659 ADAM23O75077 832 aa17.96■□□□□ 0.47
CCDC9-202ENST00000595659 EPB41P11171 864 aaKnown RBP17.96■□□□□ 0.47
CCDC9-202ENST00000595659 RARGP13631 454 aa17.96■□□□□ 0.47
CCDC9-202ENST00000595659 ATP5C1P36542 298 aaKnown RBP17.96■□□□□ 0.47
CCDC9-202ENST00000595659 EIF2DP41214 584 aaKnown RBP17.96■□□□□ 0.47
CCDC9-202ENST00000595659 TNFRSF4P43489 277 aa17.96■□□□□ 0.47
CCDC9-202ENST00000595659 KIR2DL1P43626 348 aaPredicted RBP17.96■□□□□ 0.47
CCDC9-202ENST00000595659 MXI1P50539 228 aa17.96■□□□□ 0.47
CCDC9-202ENST00000595659 EDRF1Q3B7T1 1238 aa17.96■□□□□ 0.47
CCDC9-202ENST00000595659 IL31Q6EBC2 164 aa17.96■□□□□ 0.47
CCDC9-202ENST00000595659 TPGS1Q6ZTW0 290 aa17.96■□□□□ 0.47
CCDC9-202ENST00000595659 RASSF3Q86WH2 238 aa17.96■□□□□ 0.47
CCDC9-202ENST00000595659 ETFBKMTQ8IXQ9 262 aa17.96■□□□□ 0.47
CCDC9-202ENST00000595659 FMR1NBQ8N0W7 255 aaPredicted RBP17.96■□□□□ 0.47
CCDC9-202ENST00000595659 FRMD1Q8N878 549 aa17.96■□□□□ 0.47
CCDC9-202ENST00000595659 BHMTQ93088 406 aa17.96■□□□□ 0.47
CCDC9-202ENST00000595659 CNOT6LQ96LI5 555 aaKnown RBP17.96■□□□□ 0.47
CCDC9-202ENST00000595659 DEC1Q9P2X7 70 aa17.96■□□□□ 0.47
CCDC9-202ENST00000595659 NAGPAQ9UK23 515 aa17.96■□□□□ 0.47
CCDC9-202ENST00000595659 PCDHGA5Q9Y5G8 931 aa17.96■□□□□ 0.47
CCDC9-202ENST00000595659 ATG2BQ96BY7 2078 aa17.95■□□□□ 0.46
CCDC9-202ENST00000595659 A0A0A0MRY4 1105 aa17.95■□□□□ 0.46
CCDC9-202ENST00000595659 HOXC11O43248 304 aaPredicted RBP17.95■□□□□ 0.46
CCDC9-202ENST00000595659 FOXD2O60548 495 aaPredicted RBP17.95■□□□□ 0.46
CCDC9-202ENST00000595659 CAVIN2O95810 425 aa17.95■□□□□ 0.46
CCDC9-202ENST00000595659 GTF2H1P32780 548 aa17.95■□□□□ 0.46
CCDC9-202ENST00000595659 WASP42768 502 aa17.95■□□□□ 0.46
CCDC9-202ENST00000595659 KIF11P52732 1056 aa17.95■□□□□ 0.46
CCDC9-202ENST00000595659 DCAF17Q5H9S7 520 aaPredicted RBP17.95■□□□□ 0.46
CCDC9-202ENST00000595659 C10orf120Q5SQS8 335 aa17.95■□□□□ 0.46
CCDC9-202ENST00000595659 C10orf76Q5T2E6 689 aa17.95■□□□□ 0.46
CCDC9-202ENST00000595659 STPG1Q5TH74 334 aa17.95■□□□□ 0.46
CCDC9-202ENST00000595659 TCERG1LQ5VWI1 586 aa17.95■□□□□ 0.46
CCDC9-202ENST00000595659 HTR3DQ70Z44 454 aa17.95■□□□□ 0.46
CCDC9-202ENST00000595659 SCD5Q86SK9 330 aa17.95■□□□□ 0.46
CCDC9-202ENST00000595659 PGBD3Q8N328 593 aa17.95■□□□□ 0.46
CCDC9-202ENST00000595659 HMGB4Q8WW32 186 aa17.95■□□□□ 0.46
CCDC9-202ENST00000595659 DUSP16Q9BY84 665 aa17.95■□□□□ 0.46
CCDC9-202ENST00000595659 CYLDQ9NQC7 956 aa17.95■□□□□ 0.46
CCDC9-202ENST00000595659 VPS45Q9NRW7 570 aa17.95■□□□□ 0.46
CCDC9-202ENST00000595659 CISHQ9NSE2 258 aa17.95■□□□□ 0.46
CCDC9-202ENST00000595659 DNAJC17Q9NVM6 304 aaKnown RBP17.95■□□□□ 0.46
CCDC9-202ENST00000595659 RAB20Q9NX57 234 aa17.95■□□□□ 0.46
CCDC9-202ENST00000595659 BCCIPQ9P287 314 aaKnown RBP eCLIP17.95■□□□□ 0.46
CCDC9-202ENST00000595659 TCRBV21S2A2A0A5A6 115 aa17.94■□□□□ 0.46
CCDC9-202ENST00000595659 BCLAF3A2AJT9 711 aaKnown RBP17.94■□□□□ 0.46
CCDC9-202ENST00000595659 GOLGA6L4A6NEF3 574 aa17.94■□□□□ 0.46
CCDC9-202ENST00000595659 NEDD8-MDP1E9PL57 170 aa17.94■□□□□ 0.46
CCDC9-202ENST00000595659 ALDH1A2O94788 518 aa17.94■□□□□ 0.46
CCDC9-202ENST00000595659 DHPSP49366 369 aaPredicted RBP17.94■□□□□ 0.46
CCDC9-202ENST00000595659 PMS1P54277 932 aaKnown RBP17.94■□□□□ 0.46
CCDC9-202ENST00000595659 ENPEPQ07075 957 aa17.94■□□□□ 0.46
CCDC9-202ENST00000595659 CBWD6Q4V339 395 aa17.94■□□□□ 0.46
CCDC9-202ENST00000595659 CBWD3Q5JTY5 395 aa17.94■□□□□ 0.46
CCDC9-202ENST00000595659 EOGTQ5NDL2 527 aa17.94■□□□□ 0.46
CCDC9-202ENST00000595659 CBWD5Q5RIA9 395 aa17.94■□□□□ 0.46
CCDC9-202ENST00000595659 PMS2CLQ68D20 193 aa17.94■□□□□ 0.46
CCDC9-202ENST00000595659 ANKRD40Q6AI12 368 aa17.94■□□□□ 0.46
CCDC9-202ENST00000595659 ISM2Q6H9L7 571 aa17.94■□□□□ 0.46
CCDC9-202ENST00000595659 MIB1Q86YT6 1006 aa17.94■□□□□ 0.46
CCDC9-202ENST00000595659 SLC4A11Q8NBS3 891 aa17.94■□□□□ 0.46
CCDC9-202ENST00000595659 FBXL13Q8NEE6 735 aa17.94■□□□□ 0.46
CCDC9-202ENST00000595659 CCDC34Q96HJ3 373 aa17.94■□□□□ 0.46
CCDC9-202ENST00000595659 BBS2Q9BXC9 721 aa17.94■□□□□ 0.46
CCDC9-202ENST00000595659 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.94■□□□□ 0.46
CCDC9-202ENST00000595659 RMND1Q9NWS8 449 aa17.94■□□□□ 0.46
CCDC9-202ENST00000595659 DNMT3LQ9UJW3 386 aa17.94■□□□□ 0.46
CCDC9-202ENST00000595659 LSM7Q9UK45 103 aaKnown RBP17.94■□□□□ 0.46
CCDC9-202ENST00000595659 HCN2Q9UL51 889 aa17.94■□□□□ 0.46
CCDC9-202ENST00000595659 PCDHA5Q9Y5H7 936 aa17.94■□□□□ 0.46
CCDC9-202ENST00000595659 HMBSP08397 361 aa17.93■□□□□ 0.46
CCDC9-202ENST00000595659 TYRP14679 529 aa17.93■□□□□ 0.46
CCDC9-202ENST00000595659 RAD23BP54727 409 aa17.93■□□□□ 0.46
CCDC9-202ENST00000595659 GOLGA8FQ08AF8 430 aa17.93■□□□□ 0.46
CCDC9-202ENST00000595659 GOLGA8DPQ0D2H9 430 aa17.93■□□□□ 0.46
CCDC9-202ENST00000595659 ZNF658Q5TYW1 1059 aaPredicted RBP17.93■□□□□ 0.46
CCDC9-202ENST00000595659 GRAMD4Q6IC98 578 aa17.93■□□□□ 0.46
CCDC9-202ENST00000595659 TOGARAM2Q6ZUX3 1019 aa17.93■□□□□ 0.46
CCDC9-202ENST00000595659 ARMCX6Q7L4S7 300 aa17.93■□□□□ 0.46
CCDC9-202ENST00000595659 ZNF513Q8N8E2 541 aaPredicted RBP17.93■□□□□ 0.46
CCDC9-202ENST00000595659 TMEM176AQ96HP8 235 aa17.93■□□□□ 0.46
CCDC9-202ENST00000595659 CNTNAP3BQ96NU0 1288 aa17.93■□□□□ 0.46
CCDC9-202ENST00000595659 CNTNAP3Q9BZ76 1288 aa17.93■□□□□ 0.46
CCDC9-202ENST00000595659 PNPLA8Q9NP80 782 aa17.93■□□□□ 0.46
CCDC9-202ENST00000595659 POLMQ9NP87 494 aaPredicted RBP17.93■□□□□ 0.46
CCDC9-202ENST00000595659 PLK2Q9NYY3 685 aa17.93■□□□□ 0.46
CCDC9-202ENST00000595659 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.92■□□□□ 0.46
CCDC9-202ENST00000595659 TRIM49BA6NDI0 452 aa17.92■□□□□ 0.46
CCDC9-202ENST00000595659 PATE3B3GLJ2 98 aa17.92■□□□□ 0.46
CCDC9-202ENST00000595659 MAP3K13O43283 966 aa17.92■□□□□ 0.46
CCDC9-202ENST00000595659 STX10O60499 249 aa17.92■□□□□ 0.46
CCDC9-202ENST00000595659 PLA2G4AP47712 749 aa17.92■□□□□ 0.46
CCDC9-202ENST00000595659 RNF43Q68DV7 783 aa17.92■□□□□ 0.46
CCDC9-202ENST00000595659 TMEFF1Q8IYR6 380 aa17.92■□□□□ 0.46
CCDC9-202ENST00000595659 TERB1Q8NA31 727 aa17.92■□□□□ 0.46
CCDC9-202ENST00000595659 ENGASEQ8NFI3 743 aa17.92■□□□□ 0.46
CCDC9-202ENST00000595659 OLIG1Q8TAK6 271 aa17.92■□□□□ 0.46
CCDC9-202ENST00000595659 P2RY11Q96G91 374 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms