RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 ZNF263O14978 683 aa23.63■■□□□ 1.37
SNRNP70-204ENST00000595231 TLR5O60602 858 aa23.63■■□□□ 1.37
SNRNP70-204ENST00000595231 OLFM2O95897 454 aa23.63■■□□□ 1.37
SNRNP70-204ENST00000595231 TBX18O95935 607 aa23.63■■□□□ 1.37
SNRNP70-204ENST00000595231 CALB1P05937 261 aa23.63■■□□□ 1.37
SNRNP70-204ENST00000595231 LAMP2P13473 410 aa23.63■■□□□ 1.37
SNRNP70-204ENST00000595231 RARGP13631 454 aa23.63■■□□□ 1.37
SNRNP70-204ENST00000595231 YWHAZP63104 245 aaKnown RBP23.63■■□□□ 1.37
SNRNP70-204ENST00000595231 EFHC1Q5JVL4 640 aa23.63■■□□□ 1.37
SNRNP70-204ENST00000595231 HECTD3Q5T447 861 aa23.63■■□□□ 1.37
SNRNP70-204ENST00000595231 SLC26A9Q7LBE3 791 aa23.63■■□□□ 1.37
SNRNP70-204ENST00000595231 PHLDB2Q86SQ0 1253 aa23.63■■□□□ 1.37
SNRNP70-204ENST00000595231 CCDC170Q8IYT3 715 aa23.63■■□□□ 1.37
SNRNP70-204ENST00000595231 TRPC7Q9HCX4 862 aa23.63■■□□□ 1.37
SNRNP70-204ENST00000595231 ABCC13Q9NSE7 274 aa23.63■■□□□ 1.37
SNRNP70-204ENST00000595231 NUDT5Q9UKK9 219 aa23.63■■□□□ 1.37
SNRNP70-204ENST00000595231 STRIP2Q9ULQ0 834 aa23.63■■□□□ 1.37
SNRNP70-204ENST00000595231 TCRBV5S1A1TA0A578 114 aa23.62■■□□□ 1.37
SNRNP70-204ENST00000595231 COCHO43405 550 aa23.62■■□□□ 1.37
SNRNP70-204ENST00000595231 GLI1P08151 1106 aa23.62■■□□□ 1.37
SNRNP70-204ENST00000595231 GBP2P32456 591 aaPredicted RBP23.62■■□□□ 1.37
SNRNP70-204ENST00000595231 SCNN1AP37088 669 aa23.62■■□□□ 1.37
SNRNP70-204ENST00000595231 BTBD8Q5XKL5 378 aa23.62■■□□□ 1.37
SNRNP70-204ENST00000595231 TOGARAM2Q6ZUX3 1019 aa23.62■■□□□ 1.37
SNRNP70-204ENST00000595231 OTOP3Q7RTS5 596 aa23.62■■□□□ 1.37
SNRNP70-204ENST00000595231 CMTM8Q8IZV2 173 aa23.62■■□□□ 1.37
SNRNP70-204ENST00000595231 ARL14EPQ8N8R7 260 aaPredicted RBP23.62■■□□□ 1.37
SNRNP70-204ENST00000595231 EDEM1Q92611 657 aa23.62■■□□□ 1.37
SNRNP70-204ENST00000595231 FAM149B1Q96BN6 582 aa23.62■■□□□ 1.37
SNRNP70-204ENST00000595231 SLITRK6Q9H5Y7 841 aa23.62■■□□□ 1.37
SNRNP70-204ENST00000595231 ASNSD1Q9NWL6 643 aa23.62■■□□□ 1.37
SNRNP70-204ENST00000595231 WDR35Q9P2L0 1181 aa23.62■■□□□ 1.37
SNRNP70-204ENST00000595231 ZMYM5Q9UJ78 669 aa23.62■■□□□ 1.37
SNRNP70-204ENST00000595231 PFKLP17858 780 aa23.61■■□□□ 1.37
SNRNP70-204ENST00000595231 HDCP19113 662 aa23.61■■□□□ 1.37
SNRNP70-204ENST00000595231 SP100P23497 879 aaPredicted RBP23.61■■□□□ 1.37
SNRNP70-204ENST00000595231 RRM1P23921 792 aa23.61■■□□□ 1.37
SNRNP70-204ENST00000595231 MTF1Q14872 753 aa23.61■■□□□ 1.37
SNRNP70-204ENST00000595231 BEND5Q7L4P6 421 aa23.61■■□□□ 1.37
SNRNP70-204ENST00000595231 POPDC2Q9HBU9 364 aa23.61■■□□□ 1.37
SNRNP70-204ENST00000595231 TMEM59LQ9UK28 342 aa23.61■■□□□ 1.37
SNRNP70-204ENST00000595231 ZFP37Q9Y6Q3 630 aaPredicted RBP23.61■■□□□ 1.37
SNRNP70-204ENST00000595231 GOLGA8SH3BPF8 625 aa23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 GRAP2O75791 330 aa23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 LCA5LO95447 670 aa23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 RALAP11233 206 aa23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 FAM78AQ5JUQ0 283 aa23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 FAM102AQ5T9C2 384 aaPredicted RBP23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 RAD9BQ6WBX8 426 aa23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 LRRC8AQ8IWT6 810 aa23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 C3orf20Q8ND61 904 aa23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 ZSCAN18Q8TBC5 510 aaPredicted RBP23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 ASB16Q96NS5 453 aa23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 ASB2Q96Q27 587 aa23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 EPS15L1Q9UBC2 864 aa23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 NAALADL1Q9UQQ1 740 aa23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 C2CD4DB7Z1M9 353 aa23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 HSF2BPO75031 334 aa23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 BMP1P13497 986 aa23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 WEE1P30291 646 aa23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 SYPL2Q5VXT5 272 aa23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 KLHDC10Q6PID8 442 aa23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 GOLGA1Q92805 767 aa23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 RPGRIP1Q96KN7 1286 aa23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 SLC2A13Q96QE2 648 aa23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 EPN1Q9Y6I3 576 aaPredicted RBP23.6■■□□□ 1.37
SNRNP70-204ENST00000595231 TRAV19A0A0A6YYK7 116 aa23.59■■□□□ 1.37
SNRNP70-204ENST00000595231 NCAM1P13591 858 aa23.59■■□□□ 1.37
SNRNP70-204ENST00000595231 ATP5C1P36542 298 aaKnown RBP23.59■■□□□ 1.37
SNRNP70-204ENST00000595231 GALCP54803 685 aa23.59■■□□□ 1.37
SNRNP70-204ENST00000595231 ZXDBP98169 803 aa23.59■■□□□ 1.37
SNRNP70-204ENST00000595231 PPP1R15BQ5SWA1 713 aa23.59■■□□□ 1.37
SNRNP70-204ENST00000595231 PLEKHA7Q6IQ23 1121 aa23.59■■□□□ 1.37
SNRNP70-204ENST00000595231 ARID3BQ8IVW6 561 aaPredicted RBP23.59■■□□□ 1.37
SNRNP70-204ENST00000595231 ACSF2Q96CM8 615 aaPredicted RBP23.59■■□□□ 1.37
SNRNP70-204ENST00000595231 PACSIN1Q9BY11 444 aa23.59■■□□□ 1.37
SNRNP70-204ENST00000595231 THAP2Q9H0W7 228 aa23.59■■□□□ 1.37
SNRNP70-204ENST00000595231 SMG9Q9H0W8 520 aaKnown RBP23.59■■□□□ 1.37
SNRNP70-204ENST00000595231 VCANP13611 3396 aa23.59■■□□□ 1.37
SNRNP70-204ENST00000595231 MDM4O15151 490 aa23.58■■□□□ 1.37
SNRNP70-204ENST00000595231 ATMINO43313 823 aaPredicted RBP23.58■■□□□ 1.37
SNRNP70-204ENST00000595231 NDUFA10O95299 355 aa23.58■■□□□ 1.37
SNRNP70-204ENST00000595231 GJB6O95452 261 aa23.58■■□□□ 1.37
SNRNP70-204ENST00000595231 PRAMEF12O95522 483 aa23.58■■□□□ 1.37
SNRNP70-204ENST00000595231 ABCB4P21439 1286 aa23.58■■□□□ 1.37
SNRNP70-204ENST00000595231 AVPR1AP37288 418 aa23.58■■□□□ 1.37
SNRNP70-204ENST00000595231 RNASE9P60153 205 aaKnown RBP23.58■■□□□ 1.37
SNRNP70-204ENST00000595231 SLC7A9P82251 487 aa23.58■■□□□ 1.37
SNRNP70-204ENST00000595231 C10orf120Q5SQS8 335 aa23.58■■□□□ 1.37
SNRNP70-204ENST00000595231 TRNP1Q6NT89 227 aa23.58■■□□□ 1.37
SNRNP70-204ENST00000595231 ARCQ7LC44 396 aa23.58■■□□□ 1.37
SNRNP70-204ENST00000595231 DEFB106AQ8N104 65 aa23.58■■□□□ 1.37
SNRNP70-204ENST00000595231 SMARCD2Q92925 531 aa23.58■■□□□ 1.37
SNRNP70-204ENST00000595231 CDK5RAP1Q96SZ6 601 aaKnown RBP23.58■■□□□ 1.37
SNRNP70-204ENST00000595231 TRPV4Q9HBA0 871 aa23.58■■□□□ 1.37
SNRNP70-204ENST00000595231 METTL5Q9NRN9 209 aaKnown RBP23.58■■□□□ 1.37
SNRNP70-204ENST00000595231 NR2E1Q9Y466 385 aa23.58■■□□□ 1.37
SNRNP70-204ENST00000595231 NUP210Q8TEM1 1887 aaPredicted RBP23.58■■□□□ 1.36
SNRNP70-204ENST00000595231 ANKRD62A6NC57 917 aa23.57■■□□□ 1.36
SNRNP70-204ENST00000595231 SIGLEC16A6NMB1 481 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms