RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 CREB5Q02930 508 aa15.13■□□□□ 0.01
VMP1-206ENST00000587945 ENPEPQ07075 957 aa15.13■□□□□ 0.01
VMP1-206ENST00000587945 USP39Q53GS9 565 aaKnown RBP15.13■□□□□ 0.01
VMP1-206ENST00000587945 PPM1JQ5JR12 505 aa15.13■□□□□ 0.01
VMP1-206ENST00000587945 BTBD8Q5XKL5 378 aa15.13■□□□□ 0.01
VMP1-206ENST00000587945 KRT39Q6A163 491 aa15.13■□□□□ 0.01
VMP1-206ENST00000587945 RASSF3Q86WH2 238 aa15.13■□□□□ 0.01
VMP1-206ENST00000587945 FMR1NBQ8N0W7 255 aaPredicted RBP15.13■□□□□ 0.01
VMP1-206ENST00000587945 CCDC150Q8NCX0 1101 aa15.13■□□□□ 0.01
VMP1-206ENST00000587945 ERCC4Q92889 916 aaPredicted RBP15.13■□□□□ 0.01
VMP1-206ENST00000587945 CNOT6LQ96LI5 555 aaKnown RBP15.13■□□□□ 0.01
VMP1-206ENST00000587945 HEXIM2Q96MH2 286 aaKnown RBP15.13■□□□□ 0.01
VMP1-206ENST00000587945 ARID3AQ99856 593 aa15.13■□□□□ 0.01
VMP1-206ENST00000587945 CYLDQ9NQC7 956 aa15.13■□□□□ 0.01
VMP1-206ENST00000587945 PCDHGA5Q9Y5G8 931 aa15.13■□□□□ 0.01
VMP1-206ENST00000587945 CETN3O15182 167 aa15.12■□□□□ 0.01
VMP1-206ENST00000587945 EPB41P11171 864 aaKnown RBP15.12■□□□□ 0.01
VMP1-206ENST00000587945 RARGP13631 454 aa15.12■□□□□ 0.01
VMP1-206ENST00000587945 ATP5C1P36542 298 aaKnown RBP15.12■□□□□ 0.01
VMP1-206ENST00000587945 TNFRSF4P43489 277 aa15.12■□□□□ 0.01
VMP1-206ENST00000587945 MXI1P50539 228 aa15.12■□□□□ 0.01
VMP1-206ENST00000587945 KIF11P52732 1056 aa15.12■□□□□ 0.01
VMP1-206ENST00000587945 EDRF1Q3B7T1 1238 aa15.12■□□□□ 0.01
VMP1-206ENST00000587945 TPGS1Q6ZTW0 290 aa15.12■□□□□ 0.01
VMP1-206ENST00000587945 HTR3DQ70Z44 454 aa15.12■□□□□ 0.01
VMP1-206ENST00000587945 SCD5Q86SK9 330 aa15.12■□□□□ 0.01
VMP1-206ENST00000587945 RLN3Q8WXF3 142 aa15.12■□□□□ 0.01
VMP1-206ENST00000587945 TATDN2Q93075 761 aa15.12■□□□□ 0.01
VMP1-206ENST00000587945 DUSP16Q9BY84 665 aa15.12■□□□□ 0.01
VMP1-206ENST00000587945 VPS45Q9NRW7 570 aa15.12■□□□□ 0.01
VMP1-206ENST00000587945 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.12■□□□□ 0.01
VMP1-206ENST00000587945 RAB20Q9NX57 234 aa15.12■□□□□ 0.01
VMP1-206ENST00000587945 DEC1Q9P2X7 70 aa15.12■□□□□ 0.01
VMP1-206ENST00000587945 CIZ1Q9ULV3 898 aaPredicted RBP15.12■□□□□ 0.01
VMP1-206ENST00000587945 PCDHA5Q9Y5H7 936 aa15.12■□□□□ 0.01
VMP1-206ENST00000587945 BCLAF3A2AJT9 711 aaKnown RBP15.11■□□□□ 0.01
VMP1-206ENST00000587945 ALDH1A2O94788 518 aa15.11■□□□□ 0.01
VMP1-206ENST00000587945 CAVIN2O95810 425 aa15.11■□□□□ 0.01
VMP1-206ENST00000587945 PMS1P54277 932 aaKnown RBP15.11■□□□□ 0.01
VMP1-206ENST00000587945 MCCD1P59942 119 aaPredicted RBP15.11■□□□□ 0.01
VMP1-206ENST00000587945 CBWD6Q4V339 395 aa15.11■□□□□ 0.01
VMP1-206ENST00000587945 CBWD3Q5JTY5 395 aa15.11■□□□□ 0.01
VMP1-206ENST00000587945 EOGTQ5NDL2 527 aa15.11■□□□□ 0.01
VMP1-206ENST00000587945 CBWD5Q5RIA9 395 aa15.11■□□□□ 0.01
VMP1-206ENST00000587945 C10orf120Q5SQS8 335 aa15.11■□□□□ 0.01
VMP1-206ENST00000587945 C10orf76Q5T2E6 689 aa15.11■□□□□ 0.01
VMP1-206ENST00000587945 STPG1Q5TH74 334 aa15.11■□□□□ 0.01
VMP1-206ENST00000587945 PMS2CLQ68D20 193 aa15.11■□□□□ 0.01
VMP1-206ENST00000587945 IL31Q6EBC2 164 aa15.11■□□□□ 0.01
VMP1-206ENST00000587945 FRMD1Q8N878 549 aa15.11■□□□□ 0.01
VMP1-206ENST00000587945 SLC4A11Q8NBS3 891 aa15.11■□□□□ 0.01
VMP1-206ENST00000587945 FBXL13Q8NEE6 735 aa15.11■□□□□ 0.01
VMP1-206ENST00000587945 DUSP9Q99956 384 aaKnown RBP15.11■□□□□ 0.01
VMP1-206ENST00000587945 PNPLA8Q9NP80 782 aa15.11■□□□□ 0.01
VMP1-206ENST00000587945 CISHQ9NSE2 258 aa15.11■□□□□ 0.01
VMP1-206ENST00000587945 DNAJC17Q9NVM6 304 aaKnown RBP15.11■□□□□ 0.01
VMP1-206ENST00000587945 NAGPAQ9UK23 515 aa15.11■□□□□ 0.01
VMP1-206ENST00000587945 HCN2Q9UL51 889 aa15.11■□□□□ 0.01
VMP1-206ENST00000587945 TCRBV21S2A2A0A5A6 115 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 NEDD8-MDP1E9PL57 170 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 WASP42768 502 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 LIMK1P53667 647 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 RAD23BP54727 409 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 HSF5Q4G112 596 aaPredicted RBP15.1■□□□□ 0.01
VMP1-206ENST00000587945 DCAF17Q5H9S7 520 aaPredicted RBP15.1■□□□□ 0.01
VMP1-206ENST00000587945 TCERG1LQ5VWI1 586 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 ANKRD40Q6AI12 368 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 GRAMD4Q6IC98 578 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 MIB1Q86YT6 1006 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 ZNF513Q8N8E2 541 aaPredicted RBP15.1■□□□□ 0.01
VMP1-206ENST00000587945 TERB1Q8NA31 727 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 OLIG1Q8TAK6 271 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 HMGB4Q8WW32 186 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 BHMTQ93088 406 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 ERLEC1Q96DZ1 483 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 P2RY11Q96G91 374 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 CCDC34Q96HJ3 373 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 TMEM176AQ96HP8 235 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 CNTNAP3BQ96NU0 1288 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 BBS2Q9BXC9 721 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 CNTNAP3Q9BZ76 1288 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 POLMQ9NP87 494 aaPredicted RBP15.1■□□□□ 0.01
VMP1-206ENST00000587945 RMND1Q9NWS8 449 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 BCCIPQ9P287 314 aaKnown RBP eCLIP15.1■□□□□ 0.01
VMP1-206ENST00000587945 DNMT3LQ9UJW3 386 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 LSM7Q9UK45 103 aaKnown RBP15.1■□□□□ 0.01
VMP1-206ENST00000587945 USP3Q9Y6I4 520 aa15.1■□□□□ 0.01
VMP1-206ENST00000587945 TRIM49BA6NDI0 452 aa15.09■□□□□ 0.01
VMP1-206ENST00000587945 GOLGA6L4A6NEF3 574 aa15.09■□□□□ 0.01
VMP1-206ENST00000587945 TM4SF5O14894 197 aa15.09■□□□□ 0.01
VMP1-206ENST00000587945 ADRB1P08588 477 aa15.09■□□□□ 0.01
VMP1-206ENST00000587945 TYRP14679 529 aa15.09■□□□□ 0.01
VMP1-206ENST00000587945 PLA2G4AP47712 749 aa15.09■□□□□ 0.01
VMP1-206ENST00000587945 DHPSP49366 369 aaPredicted RBP15.09■□□□□ 0.01
VMP1-206ENST00000587945 GOLGA8FQ08AF8 430 aa15.09■□□□□ 0.01
VMP1-206ENST00000587945 GOLGA8DPQ0D2H9 430 aa15.09■□□□□ 0.01
VMP1-206ENST00000587945 ZNF658Q5TYW1 1059 aaPredicted RBP15.09■□□□□ 0.01
VMP1-206ENST00000587945 EGFLAMQ63HQ2 1017 aa15.09■□□□□ 0.01
VMP1-206ENST00000587945 KLHDC10Q6PID8 442 aa15.09■□□□□ 0.01
VMP1-206ENST00000587945 TOGARAM2Q6ZUX3 1019 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms