RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 CCDC130P13994 396 aa12.59□□□□□ -0.39
BRCA1-225ENST00000586385 ASIC1P78348 528 aa12.59□□□□□ -0.39
BRCA1-225ENST00000586385 GFPT1Q06210 699 aaPredicted RBP12.59□□□□□ -0.39
BRCA1-225ENST00000586385 ORC1Q13415 861 aa12.59□□□□□ -0.39
BRCA1-225ENST00000586385 BYSLQ13895 437 aaKnown RBP12.59□□□□□ -0.39
BRCA1-225ENST00000586385 ANO4Q32M45 955 aa12.59□□□□□ -0.39
BRCA1-225ENST00000586385 STXBP4Q6ZWJ1 553 aa12.59□□□□□ -0.39
BRCA1-225ENST00000586385 HTR3DQ70Z44 454 aa12.59□□□□□ -0.39
BRCA1-225ENST00000586385 GPRIN1Q7Z2K8 1008 aa12.59□□□□□ -0.39
BRCA1-225ENST00000586385 TRIML1Q8N9V2 468 aa12.59□□□□□ -0.39
BRCA1-225ENST00000586385 XXYLT1Q8NBI6 393 aa12.59□□□□□ -0.39
BRCA1-225ENST00000586385 LINC00301Q8NCQ3 95 aa12.59□□□□□ -0.39
BRCA1-225ENST00000586385 CEP76Q8TAP6 659 aa12.59□□□□□ -0.39
BRCA1-225ENST00000586385 IPO4Q8TEX9 1081 aaKnown RBP12.59□□□□□ -0.39
BRCA1-225ENST00000586385 HSPA12BQ96MM6 686 aa12.59□□□□□ -0.39
BRCA1-225ENST00000586385 GABRG3Q99928 467 aa12.59□□□□□ -0.39
BRCA1-225ENST00000586385 DMAP1Q9NPF5 467 aaPredicted RBP12.59□□□□□ -0.39
BRCA1-225ENST00000586385 DNAJC17Q9NVM6 304 aaKnown RBP12.59□□□□□ -0.39
BRCA1-225ENST00000586385 DNAAF2Q9NVR5 837 aaKnown RBP12.59□□□□□ -0.39
BRCA1-225ENST00000586385 CYP8B1Q9UNU6 501 aa12.59□□□□□ -0.39
BRCA1-225ENST00000586385 SH3BP1Q9Y3L3 701 aa12.59□□□□□ -0.39
BRCA1-225ENST00000586385 RAD54BQ9Y620 910 aa12.59□□□□□ -0.39
BRCA1-225ENST00000586385 WDFY3Q8IZQ1 3526 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 FREM2Q5SZK8 3169 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 WASH3PC4AMC7 463 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 HHLA1C9JL84 531 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 TLR5O60602 858 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 C4BPAP04003 597 aaKnown RBP12.58□□□□□ -0.4
BRCA1-225ENST00000586385 PDCP20941 246 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 ATICP31939 592 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 DPP6P42658 865 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 BMT2Q1RMZ1 405 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 BTBD8Q5XKL5 378 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 SHC4Q6S5L8 630 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 SLC36A4Q6YBV0 504 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 SCARA5Q6ZMJ2 495 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 ACOT1Q86TX2 421 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 C12orf56Q8IXR9 622 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 DHX58Q96C10 678 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 SMARCD1Q96GM5 515 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 ZNF419Q96HQ0 510 aaPredicted RBP12.58□□□□□ -0.4
BRCA1-225ENST00000586385 MRGPRX1Q96LB2 322 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 C7orf25Q9BPX7 421 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 NMUR1Q9HB89 426 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 CSNK1G1Q9HCP0 422 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 KRT82Q9NSB4 513 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 MARK1Q9P0L2 795 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 LHX6Q9UPM6 363 aa12.58□□□□□ -0.4
BRCA1-225ENST00000586385 DSPP15924 2871 aaKnown RBP12.57□□□□□ -0.4
BRCA1-225ENST00000586385 LRRIQ3A6PVS8 624 aaPredicted RBP12.57□□□□□ -0.4
BRCA1-225ENST00000586385 NEDD8-MDP1E9PL57 170 aa12.57□□□□□ -0.4
BRCA1-225ENST00000586385 MDM4O15151 490 aa12.57□□□□□ -0.4
BRCA1-225ENST00000586385 SH3BP5O60239 455 aa12.57□□□□□ -0.4
BRCA1-225ENST00000586385 OPHN1O60890 802 aa12.57□□□□□ -0.4
BRCA1-225ENST00000586385 AP1G2O75843 785 aa12.57□□□□□ -0.4
BRCA1-225ENST00000586385 TYRP14679 529 aa12.57□□□□□ -0.4
BRCA1-225ENST00000586385 CLDN10P78369 228 aa12.57□□□□□ -0.4
BRCA1-225ENST00000586385 TRPC3Q13507 836 aa12.57□□□□□ -0.4
BRCA1-225ENST00000586385 GRAMD4Q6IC98 578 aa12.57□□□□□ -0.4
BRCA1-225ENST00000586385 Q6ZNB5 142 aa12.57□□□□□ -0.4
BRCA1-225ENST00000586385 TRMT11Q7Z4G4 463 aaKnown RBP12.57□□□□□ -0.4
BRCA1-225ENST00000586385 PROSER1Q86XN7 944 aa12.57□□□□□ -0.4
BRCA1-225ENST00000586385 HDDC3Q8N4P3 179 aa12.57□□□□□ -0.4
BRCA1-225ENST00000586385 SLC2A14Q8TDB8 520 aa12.57□□□□□ -0.4
BRCA1-225ENST00000586385 PARD3BQ8TEW8 1205 aa12.57□□□□□ -0.4
BRCA1-225ENST00000586385 SYAP1Q96A49 352 aaPredicted RBP12.57□□□□□ -0.4
BRCA1-225ENST00000586385 MED10Q9BTT4 135 aa12.57□□□□□ -0.4
BRCA1-225ENST00000586385 COMMD8Q9NX08 183 aa12.57□□□□□ -0.4
BRCA1-225ENST00000586385 CACNA2D2Q9NY47 1150 aa12.57□□□□□ -0.4
BRCA1-225ENST00000586385 UBE4BO95155 1302 aa12.57□□□□□ -0.4
BRCA1-225ENST00000586385 ADAMTS9Q9P2N4 1935 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 A0A1W2PQD8 194 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 CYP26A1O43174 497 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 MAOBP27338 520 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 ATXN3P54252 364 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-225ENST00000586385 SNRPFP62306 86 aaKnown RBP12.56□□□□□ -0.4
BRCA1-225ENST00000586385 DLG4P78352 724 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 BNC1Q01954 994 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 NCOA4Q13772 614 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 ZNF699Q32M78 642 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 ZNF667Q5HYK9 610 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 C1orf220Q5T0J3 134 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 TPGS1Q6ZTW0 290 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 UNC13DQ70J99 1090 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 CHPFQ8IZ52 775 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 CRYBG2Q8N1P7 616 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 C12orf29Q8N999 325 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 TWNKQ96RR1 684 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 BBS2Q9BXC9 721 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 BLZF1Q9H2G9 400 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 CUEDC2Q9H467 287 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 SLC39A2Q9NP94 309 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 CYLDQ9NQC7 956 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 FAM49BQ9NUQ9 324 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 DMAC2Q9NW81 257 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 TFIP11Q9UBB9 837 aaKnown RBP12.56□□□□□ -0.4
BRCA1-225ENST00000586385 FBXO10Q9UK96 956 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 NUDT5Q9UKK9 219 aa12.56□□□□□ -0.4
BRCA1-225ENST00000586385 H0Y626 953 aa12.55□□□□□ -0.4
BRCA1-225ENST00000586385 SPTLC2O15270 562 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms