RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 RNASE9P60153 205 aaKnown RBP17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 TAF10Q12962 218 aa17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 TAF12Q16514 161 aa17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 BSPRYQ5W0U4 402 aa17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 SPATA31D4Q6ZUB0 917 aa17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 PEX26Q7Z412 305 aa17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 SCD5Q86SK9 330 aa17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 NT5DC3Q86UY8 548 aa17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 NT5C3BQ969T7 300 aa17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 WDR24Q96S15 920 aa17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 NPY6RQ99463 290 aa17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 NCAPGQ9BPX3 1015 aa17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 GOLPH3Q9H4A6 298 aa17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 NMUR1Q9HB89 426 aa17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 TLR8Q9NR97 1041 aaKnown RBP17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 JRKLQ9Y4A0 524 aa17.49■□□□□ 0.39
CDK5RAP3-230ENST00000584042 TRIOBPQ9H2D6 2365 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 RFXAPO00287 272 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 CAPN9O14815 690 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 SPOPO43791 374 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 FTCDO95954 541 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 COMTP21964 271 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 PPP3CCP48454 512 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 NRIP1P48552 1158 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 KCNC3Q14003 757 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 SLC25A52Q3SY17 297 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 CCDC14Q49A88 953 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 OTUD1Q5VV17 481 aaPredicted RBP17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 SNX30Q5VWJ9 437 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 BTBD8Q5XKL5 378 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 MSANTD2Q6P1R3 559 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 SYT10Q6XYQ8 523 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 STRADAQ7RTN6 431 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 BNIPLQ7Z465 357 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 DNAJB7Q7Z6W7 309 aaPredicted RBP17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 CFAP57Q96MR6 1250 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 NAPGQ99747 312 aaPredicted RBP17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 SMOC2Q9H3U7 446 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 DZANK1Q9NVP4 752 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 DNAI1Q9UI46 699 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 AMFRQ9UKV5 643 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 MAGED2Q9UNF1 606 aaPredicted RBP17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 ALG6Q9Y672 507 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 DENND4CQ5VZ89 1909 aa17.48■□□□□ 0.39
CDK5RAP3-230ENST00000584042 ANAPC1Q9H1A4 1944 aa17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 MIF4GDA9UHW6 222 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 PER2O15055 1255 aa17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 FANCGO15287 622 aa17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 PSTPIP1O43586 416 aa17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 LRCH4O75427 683 aa17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 TADA3O75528 432 aa17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 NCAM1P13591 858 aa17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 CTNNA2P26232 953 aa17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 PCK1P35558 622 aa17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 SULT1E1P49888 294 aa17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 TUBP50607 506 aa17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 DCAF6Q58WW2 860 aa17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 MEI1Q5TIA1 1274 aa17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 TMC8Q8IU68 726 aa17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 ZNF276Q8N554 614 aa17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 CMASQ8NFW8 434 aaPredicted RBP17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 FAM172AQ8WUF8 416 aa17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 CENPIQ92674 756 aaPredicted RBP17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 CASP10Q92851 521 aa17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 CD101Q93033 1021 aa17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 PGAP3Q96FM1 320 aaPredicted RBP17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 CDK5RAP1Q96SZ6 601 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 TTYH1Q9H313 450 aaPredicted RBP17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 OLA1Q9NTK5 396 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 TMEM51Q9NW97 253 aa17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 NAALADL1Q9UQQ1 740 aa17.47■□□□□ 0.39
CDK5RAP3-230ENST00000584042 CTAGE9A4FU28 777 aa17.46■□□□□ 0.39
CDK5RAP3-230ENST00000584042 XYLBO75191 536 aa17.46■□□□□ 0.39
CDK5RAP3-230ENST00000584042 RNF8O76064 485 aa17.46■□□□□ 0.39
CDK5RAP3-230ENST00000584042 IGLV3-25P01717 112 aa17.46■□□□□ 0.39
CDK5RAP3-230ENST00000584042 RALAP11233 206 aa17.46■□□□□ 0.39
CDK5RAP3-230ENST00000584042 CTNNA1P35221 906 aaKnown RBP17.46■□□□□ 0.39
CDK5RAP3-230ENST00000584042 EPHA5P54756 1037 aa17.46■□□□□ 0.39
CDK5RAP3-230ENST00000584042 C15orf59Q2T9L4 293 aaPredicted RBP17.46■□□□□ 0.39
CDK5RAP3-230ENST00000584042 SYPL2Q5VXT5 272 aa17.46■□□□□ 0.39
CDK5RAP3-230ENST00000584042 TADA2BQ86TJ2 420 aa17.46■□□□□ 0.39
CDK5RAP3-230ENST00000584042 RBM23Q86U06 439 aaKnown RBP17.46■□□□□ 0.39
CDK5RAP3-230ENST00000584042 LEMD2Q8NC56 503 aa17.46■□□□□ 0.39
CDK5RAP3-230ENST00000584042 DQX1Q8TE96 717 aaKnown RBP17.46■□□□□ 0.39
CDK5RAP3-230ENST00000584042 HES6Q96HZ4 224 aa17.46■□□□□ 0.39
CDK5RAP3-230ENST00000584042 ZNF512Q96ME7 567 aaPredicted RBP17.46■□□□□ 0.39
CDK5RAP3-230ENST00000584042 TBCBQ99426 244 aa17.46■□□□□ 0.39
CDK5RAP3-230ENST00000584042 SFXN1Q9H9B4 322 aa17.46■□□□□ 0.39
CDK5RAP3-230ENST00000584042 IL21Q9HBE4 155 aa17.46■□□□□ 0.39
CDK5RAP3-230ENST00000584042 ZNF334Q9HCZ1 680 aaPredicted RBP17.46■□□□□ 0.39
CDK5RAP3-230ENST00000584042 ASAH2Q9NR71 780 aa17.46■□□□□ 0.39
CDK5RAP3-230ENST00000584042 OSER1Q9NX31 292 aa17.46■□□□□ 0.39
CDK5RAP3-230ENST00000584042 CCDC66A2RUB6 948 aa17.45■□□□□ 0.38
CDK5RAP3-230ENST00000584042 ZNF840PA6NDX5 716 aa17.45■□□□□ 0.38
CDK5RAP3-230ENST00000584042 CCL16O15467 120 aa17.45■□□□□ 0.38
CDK5RAP3-230ENST00000584042 RFPL2O75678 378 aa17.45■□□□□ 0.38
CDK5RAP3-230ENST00000584042 ENDOD1O94919 500 aa17.45■□□□□ 0.38
CDK5RAP3-230ENST00000584042 FGF19O95750 216 aa17.45■□□□□ 0.38
CDK5RAP3-230ENST00000584042 SRGAP2BP0DMP2 458 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms