RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 DBX2Q6ZNG2 339 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 GPBP1Q86WP2 473 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 MIB1Q86YT6 1006 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 CSGALNACT2Q8N6G5 542 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 TOP6BLQ8N6T0 577 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 C1orf127Q8N9H9 656 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 TERB1Q8NA31 727 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 BAHD1Q8TBE0 780 aaPredicted RBP8.11□□□□□ -1.11
CCDC47-205ENST00000582331 POMGNT1Q8WZA1 660 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 SNX21Q969T3 373 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 MYLPFQ96A32 169 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 ERLEC1Q96DZ1 483 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 MRGPRX1Q96LB2 322 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 ACOX2Q99424 681 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 SYT15Q9BQS2 421 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 MIR1-1HGQ9H1L0 117 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 PRORYQ9H606 182 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 CDH9Q9ULB4 789 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 SH3BP1Q9Y3L3 701 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 NFE2L3Q9Y4A8 694 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 PCDHGB2Q9Y5G2 931 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 STYXL1Q9Y6J8 313 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 URB1O60287 2271 aaKnown RBP8.11□□□□□ -1.11
CCDC47-205ENST00000582331 SHROOM3Q8TF72 1996 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 CYSRT1A8MQ03 144 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 CAPN9O14815 690 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 TRIM66O15016 1216 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 TRIM24O15164 1050 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 BCAT2O15382 392 aaPredicted RBP8.1□□□□□ -1.11
CCDC47-205ENST00000582331 KRT19P08727 400 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 NCAM1P13591 858 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 HLA-EP13747 358 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 LMO2P25791 158 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 ITPKBP27987 946 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 PSMC1P62191 440 aaKnown RBP8.1□□□□□ -1.11
CCDC47-205ENST00000582331 NOP14P78316 857 aaKnown RBP8.1□□□□□ -1.11
CCDC47-205ENST00000582331 RBP5P82980 135 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 ST3GAL1Q11201 340 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 TAF10Q12962 218 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 POSTNQ15063 836 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 SOWAHAQ2M3V2 549 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 HLA-BQ31612 363 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 TMEM119Q4V9L6 283 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 GRAMD4Q6IC98 578 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 LRRC69Q6ZNQ3 347 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 DPH6Q7L8W6 267 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 TMEM25Q86YD3 366 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 ZNF843Q8N446 348 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 ZCCHC9Q8N567 271 aaKnown RBP8.1□□□□□ -1.11
CCDC47-205ENST00000582331 FAM184AQ8NB25 1140 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 CADM4Q8NFZ8 388 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 SCFD1Q8WVM8 642 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 TOE1Q96GM8 510 aaKnown RBP8.1□□□□□ -1.11
CCDC47-205ENST00000582331 C8orf48Q96LL4 319 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 SLITRK1Q96PX8 696 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 GABRG3Q99928 467 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 FAM213AQ9BRX8 229 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 GPR174Q9BXC1 333 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 SLC6A17Q9H1V8 727 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 CD248Q9HCU0 757 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 CD93Q9NPY3 652 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 SPHK2Q9NRA0 654 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 WSB2Q9NYS7 404 aaPredicted RBP8.1□□□□□ -1.11
CCDC47-205ENST00000582331 ITGA11Q9UKX5 1188 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.1□□□□□ -1.11
CCDC47-205ENST00000582331 FNDC3AQ9Y2H6 1198 aaKnown RBP8.1□□□□□ -1.11
CCDC47-205ENST00000582331 R3HCC1Q9Y3T6 440 aaKnown RBP8.1□□□□□ -1.11
CCDC47-205ENST00000582331 RAD54BQ9Y620 910 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 ACACAQ13085 2346 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 TENM4Q6N022 2769 aa8.1□□□□□ -1.11
CCDC47-205ENST00000582331 APC2O95996 2303 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 MYOFQ9NZM1 2061 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 VWA3AA6NCI4 1184 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 CAPN8A6NHC0 703 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 F8VP50 259 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 J3QKU1 62 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 GFRA2O00451 464 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 RRP8O43159 456 aaKnown RBP8.09□□□□□ -1.11
CCDC47-205ENST00000582331 TNFSF14O43557 240 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 TBCAO75347 108 aaKnown RBP8.09□□□□□ -1.11
CCDC47-205ENST00000582331 S1PR4O95977 384 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 PDGFRBP09619 1106 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 EIF2S3P41091 472 aaKnown RBP8.09□□□□□ -1.11
CCDC47-205ENST00000582331 SLC19A1P41440 591 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 GCGRP47871 477 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 NEK4P51957 841 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 WNT7BP56706 349 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 BNC1Q01954 994 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 IFRD2Q12894 506 aaPredicted RBP8.09□□□□□ -1.11
CCDC47-205ENST00000582331 SMAD1Q15797 465 aaKnown RBP8.09□□□□□ -1.11
CCDC47-205ENST00000582331 CCDC157Q569K6 752 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 LARP1BQ659C4 914 aaKnown RBP8.09□□□□□ -1.11
CCDC47-205ENST00000582331 SCARA3Q6AZY7 606 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 CCDC83Q8IWF9 413 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 BBS7Q8IWZ6 715 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 PDZD8Q8NEN9 1154 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 ENGASEQ8NFI3 743 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 MYCBPAPQ8TBZ2 947 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 PCED1BQ96HM7 432 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 XPO6Q96QU8 1125 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms