RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 TUBP50607 506 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 SLC12A3P55017 1021 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 SNRPD1P62314 119 aaKnown RBP10.55□□□□□ -0.72
MSI2-209ENST00000579483 SLC6A3Q01959 620 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 PLPP4Q5VZY2 271 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 LLGL2Q6P1M3 1020 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 ABHD15Q6UXT9 468 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 OTOP2Q7RTS6 562 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 SUGP1Q8IWZ8 645 aaKnown RBP10.55□□□□□ -0.72
MSI2-209ENST00000579483 GBP7Q8N8V2 638 aaPredicted RBP10.55□□□□□ -0.72
MSI2-209ENST00000579483 PITPNM3Q9BZ71 974 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 PRDM10Q9NQV6 1147 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 NEU2Q9Y3R4 380 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 CLUHO75153 1309 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 KANSL1LA0AUZ9 987 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 MTA2O94776 668 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 NPR3P17342 541 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 NR1D1P20393 614 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 GRIN1Q05586 938 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 SULT2A1Q06520 285 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 KCNA1Q09470 495 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 ORC1Q13415 861 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 CLEC16AQ2KHT3 1053 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 FAM83EQ2M2I3 478 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 WSCD1Q658N2 575 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 PRUNE1Q86TP1 453 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 MYO1HQ8N1T3 1032 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 RBM15Q96T37 977 aaKnown RBP eCLIP10.55□□□□□ -0.72
MSI2-209ENST00000579483 POP1Q99575 1024 aaKnown RBP10.55□□□□□ -0.72
MSI2-209ENST00000579483 NDEL1Q9GZM8 345 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 FAM124BQ9H5Z6 455 aaPredicted RBP10.55□□□□□ -0.72
MSI2-209ENST00000579483 SYTL2Q9HCH5 934 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 UBA2Q9UBT2 640 aaPredicted RBP10.55□□□□□ -0.72
MSI2-209ENST00000579483 PADI3Q9ULW8 664 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 PLAAQ9Y263 795 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 KPNA3O00505 521 aaPredicted RBP10.55□□□□□ -0.72
MSI2-209ENST00000579483 CLASP2O75122 1294 aaKnown RBP10.55□□□□□ -0.72
MSI2-209ENST00000579483 PROSCO94903 275 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 NFATC1O95644 943 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 ESRRAP11474 423 aaPredicted RBP10.55□□□□□ -0.72
MSI2-209ENST00000579483 CTSEP14091 401 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 MSH3P20585 1137 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 NOS2P35228 1153 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 HSPA9P38646 679 aaKnown RBP10.55□□□□□ -0.72
MSI2-209ENST00000579483 RAP1GDS1P52306 607 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 ZNF200P98182 395 aaPredicted RBP10.55□□□□□ -0.72
MSI2-209ENST00000579483 ITGA9Q13797 1035 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 EFTUD2Q15029 972 aaKnown RBP eCLIP10.55□□□□□ -0.72
MSI2-209ENST00000579483 RASGRP2Q7LDG7 609 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 ZNF669Q96BR6 464 aaPredicted RBP10.55□□□□□ -0.72
MSI2-209ENST00000579483 BTBD6Q96KE9 485 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 GPR88Q9GZN0 384 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 SMG5Q9UPR3 1016 aaKnown RBP10.55□□□□□ -0.72
MSI2-209ENST00000579483 DYRK1BQ9Y463 629 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 TLL2Q9Y6L7 1015 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 MAGEB16A2A368 324 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 TARSL2A2RTX5 802 aaKnown RBP10.55□□□□□ -0.72
MSI2-209ENST00000579483 WTIPA6NIX2 430 aaPredicted RBP10.55□□□□□ -0.72
MSI2-209ENST00000579483 C5orf58C9J3I9 102 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 SOCS7O14512 581 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 SYN3O14994 580 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 NCK2O43639 380 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 SRP72O76094 671 aaKnown RBP10.55□□□□□ -0.72
MSI2-209ENST00000579483 MMEP08473 750 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 ITGB5P18084 799 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 PPP3CCP48454 512 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 SCNN1BP51168 640 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 AHCYL2Q96HN2 611 aaKnown RBP10.55□□□□□ -0.72
MSI2-209ENST00000579483 VPS50Q96JG6 964 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 PRKD2Q9BZL6 878 aa10.55□□□□□ -0.72
MSI2-209ENST00000579483 TSR3Q9UJK0 312 aaKnown RBP10.55□□□□□ -0.72
MSI2-209ENST00000579483 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.55□□□□□ -0.72
MSI2-209ENST00000579483 NRXN3Q9Y4C0 1643 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 BAG2O95816 211 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 NR2C2P49116 596 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 CNGA2Q16280 664 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 HP1BP3Q5SSJ5 553 aaPredicted RBP10.54□□□□□ -0.72
MSI2-209ENST00000579483 EXD1Q8NHP7 514 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 CCDC3Q9BQI4 270 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 LRRC40Q9H9A6 602 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 MAN1C1Q9NR34 630 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 ZMYND8Q9ULU4 1186 aaPredicted RBP10.54□□□□□ -0.72
MSI2-209ENST00000579483 INSL6Q9Y581 213 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 F8VZ95 297 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 SPTLC1O15269 473 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 AOC2O75106 756 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 ERBB2P04626 1255 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 NCAPHQ15003 741 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 SERPINA13PQ6UXR4 307 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 USP45Q70EL2 814 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 RASAL3Q86YV0 1011 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 EDEM1Q92611 657 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 PARD6BQ9BYG5 372 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 SEMA6BQ9H3T3 888 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 STK38LQ9Y2H1 464 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 SUPT3HB4E1H0 165 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 MICAL2O94851 1124 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 CYP3A5P20815 502 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 HPCAP84074 193 aa10.54□□□□□ -0.72
MSI2-209ENST00000579483 PDCLQ13371 301 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms