RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 ARHGEF19Q8IW93 802 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 SCML4Q8N228 414 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 ATRIPQ8WXE1 791 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 KCTD13Q8WZ19 329 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 KREMEN1Q96MU8 473 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 FBRSL1Q9HCM7 1045 aaKnown RBP15.61■□□□□ 0.09
SS18-212ENST00000579061 R4GN57 208 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 CHURC1-FNTBB4DL54 471 aa15.6■□□□□ 0.09
SS18-212ENST00000579061 RNF225M0QZC1 329 aaPredicted RBP15.6■□□□□ 0.09
SS18-212ENST00000579061 TBX18O95935 607 aa15.6■□□□□ 0.09
SS18-212ENST00000579061 EGFP01133 1207 aa15.6■□□□□ 0.09
SS18-212ENST00000579061 LMNAP02545 664 aaKnown RBP15.6■□□□□ 0.09
SS18-212ENST00000579061 HOXA6P31267 233 aa15.6■□□□□ 0.09
SS18-212ENST00000579061 OPRD1P41143 372 aa15.6■□□□□ 0.09
SS18-212ENST00000579061 MTIF2P46199 727 aaKnown RBP15.6■□□□□ 0.09
SS18-212ENST00000579061 TKTL1P51854 596 aa15.6■□□□□ 0.09
SS18-212ENST00000579061 TRIM65Q6PJ69 517 aa15.6■□□□□ 0.09
SS18-212ENST00000579061 RHBDF2Q6PJF5 856 aa15.6■□□□□ 0.09
SS18-212ENST00000579061 GBP6Q6ZN66 633 aa15.6■□□□□ 0.09
SS18-212ENST00000579061 RBM43Q6ZSC3 357 aaKnown RBP15.6■□□□□ 0.09
SS18-212ENST00000579061 CREBRFQ8IUR6 639 aa15.6■□□□□ 0.09
SS18-212ENST00000579061 RBBP8NLQ8NC74 664 aaPredicted RBP15.6■□□□□ 0.09
SS18-212ENST00000579061 TFAP2BQ92481 460 aa15.6■□□□□ 0.09
SS18-212ENST00000579061 LRRC4Q9HBW1 653 aa15.6■□□□□ 0.09
SS18-212ENST00000579061 LSM7Q9UK45 103 aaKnown RBP15.6■□□□□ 0.09
SS18-212ENST00000579061 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.6■□□□□ 0.09
SS18-212ENST00000579061 TULP2O00295 520 aa15.59■□□□□ 0.09
SS18-212ENST00000579061 GREM1O60565 184 aa15.59■□□□□ 0.09
SS18-212ENST00000579061 ZBED1O96006 694 aa15.59■□□□□ 0.09
SS18-212ENST00000579061 MFAP3P55082 362 aa15.59■□□□□ 0.09
SS18-212ENST00000579061 COG7P83436 770 aa15.59■□□□□ 0.09
SS18-212ENST00000579061 GAD2Q05329 585 aa15.59■□□□□ 0.09
SS18-212ENST00000579061 MAN2A1Q16706 1144 aa15.59■□□□□ 0.09
SS18-212ENST00000579061 EXOC3L4Q17RC7 722 aa15.59■□□□□ 0.09
SS18-212ENST00000579061 C10orf120Q5SQS8 335 aa15.59■□□□□ 0.09
SS18-212ENST00000579061 TSSK4Q6SA08 328 aa15.59■□□□□ 0.09
SS18-212ENST00000579061 BBS7Q8IWZ6 715 aa15.59■□□□□ 0.09
SS18-212ENST00000579061 UBA3Q8TBC4 463 aa15.59■□□□□ 0.09
SS18-212ENST00000579061 GPT2Q8TD30 523 aa15.59■□□□□ 0.09
SS18-212ENST00000579061 SLC35F5Q8WV83 523 aa15.59■□□□□ 0.09
SS18-212ENST00000579061 ULBP1Q9BZM6 244 aa15.59■□□□□ 0.09
SS18-212ENST00000579061 UBE2TQ9NPD8 197 aaPredicted RBP15.59■□□□□ 0.09
SS18-212ENST00000579061 DMDP11532 3685 aa15.59■□□□□ 0.09
SS18-212ENST00000579061 MYO18AQ92614 2054 aaKnown RBP15.58■□□□□ 0.09
SS18-212ENST00000579061 K7ESF4 209 aa15.58■□□□□ 0.08
SS18-212ENST00000579061 HOXC11O43248 304 aaPredicted RBP15.58■□□□□ 0.08
SS18-212ENST00000579061 RNF40O75150 1001 aa15.58■□□□□ 0.08
SS18-212ENST00000579061 IRF1P10914 325 aa15.58■□□□□ 0.08
SS18-212ENST00000579061 ADH5P11766 374 aa15.58■□□□□ 0.08
SS18-212ENST00000579061 BRD2P25440 801 aaKnown RBP15.58■□□□□ 0.08
SS18-212ENST00000579061 YWHAGP61981 247 aaKnown RBP eCLIP15.58■□□□□ 0.08
SS18-212ENST00000579061 MEA1Q16626 185 aa15.58■□□□□ 0.08
SS18-212ENST00000579061 LY6G5CQ5SRR4 150 aa15.58■□□□□ 0.08
SS18-212ENST00000579061 NAIF1Q69YI7 327 aaPredicted RBP15.58■□□□□ 0.08
SS18-212ENST00000579061 EZH1Q92800 747 aaPredicted RBP15.58■□□□□ 0.08
SS18-212ENST00000579061 WBP2Q969T9 261 aa15.58■□□□□ 0.08
SS18-212ENST00000579061 HSFY1Q96LI6 401 aa15.58■□□□□ 0.08
SS18-212ENST00000579061 ZSWIM1Q9BR11 485 aa15.58■□□□□ 0.08
SS18-212ENST00000579061 CRACR2AQ9BSW2 395 aa15.58■□□□□ 0.08
SS18-212ENST00000579061 CNGB3Q9NQW8 809 aa15.58■□□□□ 0.08
SS18-212ENST00000579061 SPHK2Q9NRA0 654 aa15.58■□□□□ 0.08
SS18-212ENST00000579061 OLA1Q9NTK5 396 aaKnown RBP15.58■□□□□ 0.08
SS18-212ENST00000579061 APEX2Q9UBZ4 518 aa15.58■□□□□ 0.08
SS18-212ENST00000579061 ZNF510Q9Y2H8 683 aa15.58■□□□□ 0.08
SS18-212ENST00000579061 OTOGLQ3ZCN5 2332 aa15.57■□□□□ 0.08
SS18-212ENST00000579061 A0A0A0MRY4 1105 aa15.57■□□□□ 0.08
SS18-212ENST00000579061 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.57■□□□□ 0.08
SS18-212ENST00000579061 M0QYV0 167 aa15.57■□□□□ 0.08
SS18-212ENST00000579061 SCAMP3O14828 347 aaKnown RBP15.57■□□□□ 0.08
SS18-212ENST00000579061 STC2O76061 302 aa15.57■□□□□ 0.08
SS18-212ENST00000579061 MBD3O95983 291 aa15.57■□□□□ 0.08
SS18-212ENST00000579061 SLC9A1P19634 815 aa15.57■□□□□ 0.08
SS18-212ENST00000579061 CNR2P34972 360 aa15.57■□□□□ 0.08
SS18-212ENST00000579061 ADIGQ0VDE8 80 aa15.57■□□□□ 0.08
SS18-212ENST00000579061 PREPLQ4J6C6 727 aaPredicted RBP15.57■□□□□ 0.08
SS18-212ENST00000579061 Q6ZNB5 142 aa15.57■□□□□ 0.08
SS18-212ENST00000579061 BHLHA9Q7RTU4 235 aa15.57■□□□□ 0.08
SS18-212ENST00000579061 SIX6OS1Q8N1H7 587 aa15.57■□□□□ 0.08
SS18-212ENST00000579061 SUMF1Q8NBK3 374 aa15.57■□□□□ 0.08
SS18-212ENST00000579061 ACDQ96AP0 544 aa15.57■□□□□ 0.08
SS18-212ENST00000579061 PNKPQ96T60 521 aa15.57■□□□□ 0.08
SS18-212ENST00000579061 TUBGCP2Q9BSJ2 902 aa15.57■□□□□ 0.08
SS18-212ENST00000579061 DCLK3Q9C098 648 aa15.57■□□□□ 0.08
SS18-212ENST00000579061 NUDT5Q9UKK9 219 aa15.57■□□□□ 0.08
SS18-212ENST00000579061 EP300Q09472 2414 aaPredicted RBP15.56■□□□□ 0.08
SS18-212ENST00000579061 CCDC163A0A0D9SF12 145 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 MDM4O15151 490 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 MED7O43513 233 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 APODP05090 189 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 KRT5P13647 590 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 PON1P27169 355 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 DAOAP59103 153 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 EFEMP1Q12805 493 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 VWA3BQ502W6 1294 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 BTBD8Q5XKL5 378 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 PMF1Q6P1K2 205 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 PKN3Q6P5Z2 889 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 RSRC2Q7L4I2 434 aaKnown RBP15.56■□□□□ 0.08
SS18-212ENST00000579061 SYT13Q7L8C5 426 aa15.56■□□□□ 0.08
SS18-212ENST00000579061 LONP2Q86WA8 852 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms