RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 LRRC57Q8N9N7 239 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 ANKRD52Q8NB46 1076 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 TRIM58Q8NG06 486 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 JOSD2Q8TAC2 188 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 MYCBPAPQ8TBZ2 947 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 IPO4Q8TEX9 1081 aaKnown RBP10.58□□□□□ -0.72
CRLF3-202ENST00000577725 CLEC4CQ8WTT0 213 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 NDRG1Q92597 394 aaKnown RBP10.58□□□□□ -0.72
CRLF3-202ENST00000577725 CASP10Q92851 521 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 C18orf8Q96DM3 657 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 IGSF21Q96ID5 467 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 PIWIL1Q96J94 861 aaKnown RBP10.58□□□□□ -0.72
CRLF3-202ENST00000577725 ZNF558Q96NG5 402 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 PSMB7Q99436 277 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 SMOQ99835 787 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 ACBD6Q9BR61 282 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 DUSP16Q9BY84 665 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 DNAI2Q9GZS0 605 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 MIS12Q9H081 205 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 EPC1Q9H2F5 836 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 METTL5Q9NRN9 209 aaKnown RBP10.58□□□□□ -0.72
CRLF3-202ENST00000577725 ANAPC7Q9UJX3 599 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 GMEB2Q9UKD1 530 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 SIT1Q9Y3P8 196 aa10.58□□□□□ -0.72
CRLF3-202ENST00000577725 TCRBV5S1A1TA0A578 114 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 KRBA1A5PL33 1030 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 C2CD2LO14523 706 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 SYN3O14994 580 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 ADAM12O43184 909 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 SRGAP2O75044 1071 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 GRAP2O75791 330 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 MTA2O94776 668 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 OAZ2O95190 189 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 FAM200BP0CF97 657 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 SETSIPP0DME0 302 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 RPL17P18621 184 aaKnown RBP10.57□□□□□ -0.72
CRLF3-202ENST00000577725 BDNFP23560 247 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 ALDH7A1P49419 539 aaKnown RBP10.57□□□□□ -0.72
CRLF3-202ENST00000577725 ERVFC1P60507 584 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 RPL7AP62424 266 aaKnown RBP10.57□□□□□ -0.72
CRLF3-202ENST00000577725 OGDHQ02218 1023 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 IFI16Q16666 785 aaKnown RBP10.57□□□□□ -0.72
CRLF3-202ENST00000577725 DAB2IPQ5VWQ8 1189 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 PPP1R2P3Q6NXS1 205 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 FAM171BQ6P995 826 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 RSPO2Q6UXX9 243 aaPredicted RBP10.57□□□□□ -0.72
CRLF3-202ENST00000577725 CLEC20AQ6ZU45 233 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 GPRIN1Q7Z2K8 1008 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 MAML2Q8IZL2 1156 aaPredicted RBP10.57□□□□□ -0.72
CRLF3-202ENST00000577725 SLC39A11Q8N1S5 342 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 MSANTD4Q8NCY6 345 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 ZMIZ2Q8NF64 920 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 FEZF2Q8TBJ5 459 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 SPATA18Q8TC71 538 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 SLC35F5Q8WV83 523 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 ACSF2Q96CM8 615 aaPredicted RBP10.57□□□□□ -0.72
CRLF3-202ENST00000577725 VCPIP1Q96JH7 1222 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 PGLYRP2Q96PD5 576 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 MCEEQ96PE7 176 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 TTPALQ9BTX7 342 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 SELENOOQ9BVL4 669 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 TLR10Q9BXR5 811 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 SLC4A5Q9BY07 1137 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 ZCWPW1Q9H0M4 648 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 KDM4CQ9H3R0 1056 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 TBC1D17Q9HA65 648 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 UVRAGQ9P2Y5 699 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 PCDHB12Q9Y5F1 795 aa10.57□□□□□ -0.72
CRLF3-202ENST00000577725 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.57□□□□□ -0.72
CRLF3-202ENST00000577725 FSCN2O14926 492 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 XPO1O14980 1071 aaKnown RBP10.56□□□□□ -0.72
CRLF3-202ENST00000577725 PAPSS1O43252 624 aaPredicted RBP10.56□□□□□ -0.72
CRLF3-202ENST00000577725 TBC1D4O60343 1298 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 TUBB4AP04350 444 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 PYGBP11216 843 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 LAG3P18627 525 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 COMTP21964 271 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 GABRB2P47870 512 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 GPR15P49685 360 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 RNASE9P60153 205 aaKnown RBP10.56□□□□□ -0.72
CRLF3-202ENST00000577725 AMPD2Q01433 879 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 PLCB3Q01970 1234 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 MRPL58Q14197 206 aaKnown RBP10.56□□□□□ -0.72
CRLF3-202ENST00000577725 TCEAL1Q15170 157 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 TAF5Q15542 800 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 FAM102AQ5T9C2 384 aaPredicted RBP10.56□□□□□ -0.72
CRLF3-202ENST00000577725 MEI1Q5TIA1 1274 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 SDHAF4Q5VUM1 108 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 ZNF280DQ6N043 979 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 C11orf63Q6NUN7 778 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 PEX26Q7Z412 305 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 NT5DC3Q86UY8 548 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 PIGZQ86VD9 579 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 SPATA2LQ8IUW3 424 aaPredicted RBP10.56□□□□□ -0.72
CRLF3-202ENST00000577725 TTC9BQ8N6N2 239 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 EMC1Q8N766 993 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 LRRN4CLQ8ND94 238 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 STKLD1Q8NE28 680 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 AUTS2Q8WXX7 1259 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 MCRS1Q96EZ8 462 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms