RNA–Protein interactions for RNA: ENST00000566215.5

UBE3A-205, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE3A, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-205ENST00000566215 FAM208BQ5VWN6 2430 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 CACNA1BQ00975 2339 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 ENC1O14682 589 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 PPEF2O14830 753 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 ALOX15BO15296 676 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 ARHGAP6O43182 974 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 NDUFS2O75306 463 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 TULP3O75386 442 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 TNFSF9P41273 254 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 TOB1P50616 345 aaPredicted RBP6.51□□□□□ -1.37
UBE3A-205ENST00000566215 IL17AQ16552 155 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 HECTD3Q5T447 861 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 ANO7Q6IWH7 933 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 ZNF605Q86T29 641 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 OSTM1Q86WC4 334 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 DCP2Q8IU60 420 aaKnown RBP6.51□□□□□ -1.37
UBE3A-205ENST00000566215 ZNF248Q8NDW4 579 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 LRRC15Q8TF66 581 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 ASB12Q8WXK4 309 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 RAD54LQ92698 747 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 FGF11Q92914 225 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 PLD4Q96BZ4 506 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 LMLNQ96KR4 655 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 SYT15Q9BQS2 421 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 PYM1Q9BRP8 204 aaKnown RBP6.51□□□□□ -1.37
UBE3A-205ENST00000566215 KIFC3Q9BVG8 833 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 CUEDC2Q9H467 287 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 MAGEF1Q9HAY2 307 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 KIF3AQ9Y496 699 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 CEP250Q9BV73 2442 aa6.51□□□□□ -1.37
UBE3A-205ENST00000566215 MAP1BP46821 2468 aaKnown RBP6.5□□□□□ -1.37
UBE3A-205ENST00000566215 A0A1W2PR77 199 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 TARSL2A2RTX5 802 aaKnown RBP6.5□□□□□ -1.37
UBE3A-205ENST00000566215 ASLP04424 464 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 GBP1P32455 592 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 PCBP4P57723 403 aaKnown RBP6.5□□□□□ -1.37
UBE3A-205ENST00000566215 TLE3Q04726 772 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 NNTQ13423 1086 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 HLA-BQ31612 363 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 C12orf40Q86WS4 652 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 TPCN2Q8NHX9 752 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 SAP25Q8TEE9 199 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 ACCSQ96QU6 501 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 LRRC27Q9C0I9 530 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 PRDM16Q9HAZ2 1276 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 CRTAC1Q9NQ79 661 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 INTS13Q9NVM9 706 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 SIX4Q9UIU6 781 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 USP3Q9Y6I4 520 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 TRABD2BA6NFA1 517 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 LATO43561 262 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 CKMP06732 381 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 PLA2G4AP47712 749 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 LSSP48449 732 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 PSMD6Q15008 389 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 NEK5Q6P3R8 708 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 ARL14EPQ8N8R7 260 aaPredicted RBP6.5□□□□□ -1.37
UBE3A-205ENST00000566215 TTC17Q96AE7 1141 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 ERLEC1Q96DZ1 483 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 PGLYRP2Q96PD5 576 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 SLC22A12Q96S37 553 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 BLOC1S4Q9NUP1 217 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 FTSJ1Q9UET6 329 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 CPQQ9Y646 472 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 CSNK1G3Q9Y6M4 447 aa6.5□□□□□ -1.37
UBE3A-205ENST00000566215 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 C2orf78A6NCI8 922 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 HNRNPDLO14979 420 aaKnown RBP6.49□□□□□ -1.37
UBE3A-205ENST00000566215 IRAK2O43187 625 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 SRPRAP08240 638 aaKnown RBP6.49□□□□□ -1.37
UBE3A-205ENST00000566215 YWHAQP27348 245 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 CHKAP35790 457 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 INCA1Q0VD86 236 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 ST3GAL1Q11201 340 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 STARD3Q14849 445 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 MEA1Q16626 185 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 ME3Q16798 604 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 KRTAP21-3Q3LHN1 58 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 DCAF12L1Q5VU92 463 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 FYB2Q5VWT5 728 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 TRIM69Q86WT6 500 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 SLC9A9Q8IVB4 645 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 CCDC117Q8IWD4 279 aaPredicted RBP6.49□□□□□ -1.37
UBE3A-205ENST00000566215 SDR16C5Q8N3Y7 309 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 SCFD1Q8WVM8 642 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 MYLPFQ96A32 169 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 TMEM159Q96B96 161 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 HSPA12BQ96MM6 686 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 RSPH9Q9H1X1 276 aaPredicted RBP6.49□□□□□ -1.37
UBE3A-205ENST00000566215 STARD5Q9NSY2 213 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 ABI2Q9NYB9 513 aaPredicted RBP6.49□□□□□ -1.37
UBE3A-205ENST00000566215 SUN2Q9UH99 717 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 LRP4O75096 1905 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 E9PMD0 336 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 TMX2-CTNND1H3BSU7 103 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 CD82P27701 267 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 ADSSP30520 456 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 MAPK8IP2Q13387 824 aaPredicted RBP6.49□□□□□ -1.37
UBE3A-205ENST00000566215 SLC45A4Q5BKX6 768 aa6.49□□□□□ -1.37
UBE3A-205ENST00000566215 KIAA0895LQ68EN5 471 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms