RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 A2ML1A8K2U0 1454 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 TRAV6A0A075B6T7 132 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 A0A1W2PQ67 120 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 RCCD1A6NED2 376 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 FAM196BA6NMK8 535 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 MEI4A8MW99 385 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 GOLGA8SH3BPF8 625 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 PSMA7O14818 248 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 SLC22A2O15244 555 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 DAPK3O43293 454 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 RIPK2O43353 540 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 PI15O43692 258 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 GTPBP6O43824 516 aaPredicted RBP6.5□□□□□ -1.37
PTPN9-204ENST00000564970 SORBS3O60504 671 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 TAF5LO75529 589 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 CLPXO76031 633 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 CDK14O94921 469 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 ATG7O95352 703 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 ABHD2P08910 425 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 UBTFL1P0CB47 393 aaPredicted RBP6.5□□□□□ -1.37
PTPN9-204ENST00000564970 SLC2A3P11169 496 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 GYS1P13807 737 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 BRAFP15056 766 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 NPR3P17342 541 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 PSMC3P17980 439 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 PTPN1P18031 435 aaKnown RBP6.5□□□□□ -1.37
PTPN9-204ENST00000564970 ITGB6P18564 788 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 VAMP1P23763 118 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 PSMA2P25787 234 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 RPA1P27694 616 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 PDIA3P30101 505 aaKnown RBP6.5□□□□□ -1.37
PTPN9-204ENST00000564970 CHRNA3P32297 505 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 SHMT1P34896 483 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 HADHAP40939 763 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 OR3A3P47888 321 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 GDI2P50395 445 aaKnown RBP6.5□□□□□ -1.37
PTPN9-204ENST00000564970 TPTEP56180 551 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 CD83Q01151 205 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 GFPT1Q06210 699 aaPredicted RBP6.5□□□□□ -1.37
PTPN9-204ENST00000564970 ENPEPQ07075 957 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 KLRC3Q07444 240 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 DPYDQ12882 1025 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 HIC1Q14526 733 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 CDK10Q15131 360 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 ASIC2Q16515 512 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 PFKFB3Q16875 520 aaPredicted RBP6.5□□□□□ -1.37
PTPN9-204ENST00000564970 SLC9C1Q4G0N8 1177 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 IGSF11Q5DX21 431 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 FAM76BQ5HYJ3 339 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 PPM1LQ5SGD2 360 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 ZNF618Q5T7W0 954 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 CACHD1Q5VU97 1274 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 FAM205BPQ63HN1 556 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 OR7E24Q6IFN5 339 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 PGM2L1Q6PCE3 622 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 PLEKHG7Q6ZR37 379 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 RIPOR1Q6ZS17 1223 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 USP50Q70EL3 339 aaPredicted RBP6.5□□□□□ -1.37
PTPN9-204ENST00000564970 SPATC1Q76KD6 591 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 HEATR3Q7Z4Q2 680 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 GLRX5Q86SX6 157 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 NOP9Q86U38 636 aaKnown RBP6.5□□□□□ -1.37
PTPN9-204ENST00000564970 TDRPQ86YL5 185 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 TRMT44Q8IYL2 757 aaKnown RBP6.5□□□□□ -1.37
PTPN9-204ENST00000564970 CCDC116Q8IYX3 515 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 SLC30A5Q8TAD4 765 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 DTX3LQ8TDB6 740 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 BLOC1S5Q8TDH9 187 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 MYDGFQ969H8 173 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 ZUFSPQ96AP4 578 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 C18orf8Q96DM3 657 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 TMEM80Q96HE8 168 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 MAGED4Q96JG8 741 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 ZNF512BQ96KM6 892 aaPredicted RBP6.5□□□□□ -1.37
PTPN9-204ENST00000564970 COG8Q96MW5 612 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 ALPK1Q96QP1 1244 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 C17orf62Q9BQA9 187 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 KIFC1Q9BW19 673 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 OSBPL11Q9BXB4 747 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 TEX13BQ9BXU2 312 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 FRMD8Q9BZ67 464 aaPredicted RBP6.5□□□□□ -1.37
PTPN9-204ENST00000564970 VPS11Q9H270 941 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 EPB41L4BQ9H329 900 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 RNF41Q9H4P4 317 aaPredicted RBP6.5□□□□□ -1.37
PTPN9-204ENST00000564970 STN1Q9H668 368 aaKnown RBP6.5□□□□□ -1.37
PTPN9-204ENST00000564970 SIAEQ9HAT2 523 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 FANCFQ9NPI8 374 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 KMT5AQ9NQR1 393 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 GIMAP4Q9NUV9 329 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 EXTL2Q9UBQ6 330 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 GABBR1Q9UBS5 961 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 DBNLQ9UJU6 430 aaKnown RBP6.5□□□□□ -1.37
PTPN9-204ENST00000564970 PSMD13Q9UNM6 376 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 IPPQ9Y573 584 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 MAFBQ9Y5Q3 323 aaPredicted RBP6.5□□□□□ -1.37
PTPN9-204ENST00000564970 XIRP1Q702N8 1843 aaKnown RBP6.5□□□□□ -1.37
PTPN9-204ENST00000564970 ARHGAP5Q13017 1502 aa6.5□□□□□ -1.37
PTPN9-204ENST00000564970 CLTCQ00610 1675 aaKnown RBP6.49□□□□□ -1.37
PTPN9-204ENST00000564970 ROBO1Q9Y6N7 1651 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 MYH1P12882 1939 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms